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Computational Eurotransplant kidney allocation simulations demonstrate the feasibility and benefit of T-cell epitope matching

PLoS computational biology, 2021-07, Vol.17 (7), p.e1009248-e1009248

2021

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Snowflake: A deep learning-based human leukocyte antigen matching algorithm considering allele-specific surface accessibility

Frontiers in immunology, 2022-07, Vol.13, p.937587-937587

2022

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Computational Approaches to Facilitate Epitope-Based HLA Matching in Solid Organ Transplantation

Journal of Immunology Research, 2017-01, Vol.2017 (2017), p.1-9

2017

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Can PIRCHE-II Matching Outmatch Traditional HLA Matching?

Frontiers in immunology, 2021-02, Vol.12, p.631246-631246

2021

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Peptides Derived From Mismatched Paternal Human Leukocyte Antigen Predicted to Be Presented by HLA-DRB1, -DRB3/4/5, -DQ, and -DP Induce Child-Specific Antibodies in Pregnant Women

Frontiers in immunology, 2021-12, Vol.12, p.797360-797360

2021

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Quantifying uncertainty of molecular mismatch introduced by mislabeled ancestry using haplotype-based HLA genotype imputation

Frontiers in genetics, 2024-09, Vol.15, p.1444554

2024

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Analysis of T and B Cell Epitopes to Predict the Risk of de novo Donor-Specific Antibody (DSA) Production After Kidney Transplantation: A Two-Center Retrospective Cohort Study

Frontiers in immunology, 2020-08, Vol.11, p.2000-2000

2020

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Snowflake epitope matching correlates with child-specific antibodies during pregnancy and donor-specific antibodies after kidney transplantation

Frontiers in immunology, 2022-10, Vol.13, p.1005601-1005601

2022

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Clinical Significance of Shared T Cell Epitope Analysis in Early De Novo Donor-Specific Anti-HLA Antibody Production After Kidney Transplantation and Comparison With Shared B cell Epitope Analysis

Frontiers in immunology, 2021-03, Vol.12, p.621138-621138

2021

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Donor/Recipient HLA Molecular Mismatch Scores Predict Primary Humoral and Cellular Alloimmunity in Kidney Transplantation

Frontiers in immunology, 2021-03, Vol.11, p.623276-623276

2021

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Donor selection in a pediatric stem cell transplantation cohort using PIRCHE and HLA‐DPB1 typing

Pediatric blood & cancer, 2020-03, Vol.67 (3), p.e28127-n/a

2020

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Dissecting the impact of molecular T-cell HLA mismatches in kidney transplant failure: A retrospective cohort study

Frontiers in immunology, 2022-11, Vol.13, p.1067075-1067075

2022

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NephroCAGE-German-Canadian Consortium on AI for Improved Kidney Transplantation Outcome: Protocol for an Algorithm Development and Validation Study

JMIR research protocols, 2023-12, Vol.12, p.e48892-e48892

2023

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PIRCHE application major versions 3 and 4 lead to equivalent T cell epitope mismatch scores in solid organ and stem cell transplantation modules

Human immunology, 2024-05, Vol.85 (3), p.110789-110789, Article 110789

2024

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Repeated local ellipsoid protrusion supplements HLA surface characterization

HLA, 2024-01, Vol.103 (1), p.e15260-n/a

2024

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CAN EPITOPE MATCHING OUTMATCH TRADITIONAL HLA MATCHING?

Transplantation, 2020-09, Vol.104 (S3), p.S309-S309

2020

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High-resolution HLA genotyping improves PIRCHE-II assessment of molecular mismatching in kidney transplantation

Human immunology, 2024-05, Vol.85 (3), p.110813, Article 110813

2024

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Positive Long-Term Outcome of Kidney Allocation via Acceptable Mismatch Program in Highly Sensitized Patients

Transfusion medicine and hemotherapy, 2024-06, Vol.51 (3), p.140-151

2024

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PIRCHE-II Risk and Acceptable Mismatch Profile Analysis in Solid Organ Transplantation

Methods in molecular biology (Clifton, N.J.), 2024, Vol.2809, p.171

2024

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Immunologic risk stratification of pediatric heart transplant patients by combining HLAMatchmaker and PIRCHE-II

The Journal of heart and lung transplantation, 2022-07, Vol.41 (7), p.952-960

2022

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Formation of donor‐specific antibodies depends on the epitope load of mismatched HLAs in lung transplant recipients: A retrospective single‐center study

Clinical transplantation, 2022-09, Vol.36 (9), p.e14755-n/a

2022

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SaO017EPITOPE MATCHING PREDICTS IMMUNIZATION AFTER ALLOGRAFT FAILURE CAUSING LONGER WAITING TIME FOR RE-TRANSPLANTATION

Nephrology, dialysis, transplantation, 2019-06, Vol.34 (Supplement_1)

2019

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Indirectly Recognizable Epitopes Derived from Recipient Mismatched HLA-B Are Associated with Adverse Prognosis in Single-Unit Cord Blood Transplantation

Blood, 2022-11, Vol.140 (Supplement 1), p.893-894

2022

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Standard reference sequences for submission of HLA genotyping for the 18th International HLA and Immunogenetics Workshop

HLA, 2021-06, Vol.97 (6), p.512-519

2021

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P069 Completion of HLA proased nearest-neighbor extrapolation of HLA database sequences

Human immunology, 2017-09, Vol.78, p.104-104

2017

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Computational Eurotransplant kidney allocation simulations demonstrate the feasibility and benefit of T-cell epitope matching

Snowflake: A deep learning-based human leukocyte antigen matching algorithm considering allele-specific surface accessibility

Computational Approaches to Facilitate Epitope-Based HLA Matching in Solid Organ Transplantation

Can PIRCHE-II Matching Outmatch Traditional HLA Matching?

Peptides Derived From Mismatched Paternal Human Leukocyte Antigen Predicted to Be Presented by HLA-DRB1, -DRB3/4/5, -DQ, and -DP Induce Child-Specific Antibodies in Pregnant Women

Quantifying uncertainty of molecular mismatch introduced by mislabeled ancestry using haplotype-based HLA genotype imputation

Analysis of T and B Cell Epitopes to Predict the Risk of de novo Donor-Specific Antibody (DSA) Production After Kidney Transplantation: A Two-Center Retrospective Cohort Study

Snowflake epitope matching correlates with child-specific antibodies during pregnancy and donor-specific antibodies after kidney transplantation

Clinical Significance of Shared T Cell Epitope Analysis in Early De Novo Donor-Specific Anti-HLA Antibody Production After Kidney Transplantation and Comparison With Shared B cell Epitope Analysis

Donor/Recipient HLA Molecular Mismatch Scores Predict Primary Humoral and Cellular Alloimmunity in Kidney Transplantation

Donor selection in a pediatric stem cell transplantation cohort using PIRCHE and HLA‐DPB1 typing

Dissecting the impact of molecular T-cell HLA mismatches in kidney transplant failure: A retrospective cohort study

NephroCAGE-German-Canadian Consortium on AI for Improved Kidney Transplantation Outcome: Protocol for an Algorithm Development and Validation Study

PIRCHE application major versions 3 and 4 lead to equivalent T cell epitope mismatch scores in solid organ and stem cell transplantation modules

Repeated local ellipsoid protrusion supplements HLA surface characterization

CAN EPITOPE MATCHING OUTMATCH TRADITIONAL HLA MATCHING?

High-resolution HLA genotyping improves PIRCHE-II assessment of molecular mismatching in kidney transplantation

Positive Long-Term Outcome of Kidney Allocation via Acceptable Mismatch Program in Highly Sensitized Patients

PIRCHE-II Risk and Acceptable Mismatch Profile Analysis in Solid Organ Transplantation

Immunologic risk stratification of pediatric heart transplant patients by combining HLAMatchmaker and PIRCHE-II

Formation of donor‐specific antibodies depends on the epitope load of mismatched HLAs in lung transplant recipients: A retrospective single‐center study

SaO017EPITOPE MATCHING PREDICTS IMMUNIZATION AFTER ALLOGRAFT FAILURE CAUSING LONGER WAITING TIME FOR RE-TRANSPLANTATION

Indirectly Recognizable Epitopes Derived from Recipient Mismatched HLA-B Are Associated with Adverse Prognosis in Single-Unit Cord Blood Transplantation

Standard reference sequences for submission of HLA genotyping for the 18th International HLA and Immunogenetics Workshop

P069 Completion of HLA proased nearest-neighbor extrapolation of HLA database sequences

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