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Automatic extraction of gene-disease associations from literature using joint ensemble learning

PloS one, 2018-07, Vol.13 (7), p.e0200699-e0200699

2018

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Distributed smoothed tree kernel for protein-protein interaction extraction from the biomedical literature

PloS one, 2017-11, Vol.12 (11), p.e0187379-e0187379

2017

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RNA-Seq Analysis Reveals Resistome Genes and Signalling Pathway Associated with Vancomycin-Intermediate Staphylococcus aureus

Indian journal of medical microbiology, 2019-04, Vol.37 (2), p.173-198

2019

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A review on structural genomics approach applied for drug discovery against three vector-borne viral diseases: Dengue, Chikungunya and Zika

Virus genes, 2022-06, Vol.58 (3), p.151-171

2022

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Analysis of Chromate Transporters in Bacterial Species for Cr(VI) Reduction Isolated from Tannery Effluent Contaminated Site of Dindigul District, Tamil Nadu, India

Geomicrobiology journal, 2021-07, Vol.38 (7), p.598-606

2021

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Transcriptomic meta-analysis reveals biomarker pairs and key pathways in Tetralogy of Fallot

Journal of bioinformatics and computational biology, 2022-08, Vol.20 (4)

2022

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Multiscale Laplacian graph kernel combined with lexico-syntactic patterns for biomedical event extraction from literature

Knowledge and information systems, 2021, Vol.63 (1), p.143-173

2021

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Two way network construction and analysis of mRNA, miRNA and lncRNA reveals critical regulators and regulatory modules in cardiovascular diseases

Genes & genomics, 2020-08, Vol.42 (8), p.855-867

2020

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Design, Synthesis and Evaluation of Antimicrobial Database-Derived Peptides Against Drug-Resistant Gram-Positive and Gram-Negative Pathogens

International journal of peptide research and therapeutics, 2021-06, Vol.27 (2), p.1459-1468

2021

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Classifying protein-protein interaction articles from biomedical literature using many relevant features and context-free grammar

Journal of King Saud University. Computer and information sciences, 2020-06, Vol.32 (5), p.553-560

2020

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Leveraging big data bioinformatics approaches to extract knowledge from Staphylococcus aureus public omics data

Critical reviews in microbiology, 2023-05, Vol.49 (3), p.391-413

2023

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ImmunemiR - A Database of Prioritized Immune miRNA Disease Associations and its Interactome

MicroRNA, 2017, Vol.6 (1), p.71-78

2017

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Pancreatic lipase related protein 1 as a potential target in triglyceride breakdown: A molecular docking studies with in vitro appraisal

Results in Chemistry, 2023-01, Vol.5, p.100960, Article 100960

2023

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DisGeReExT: a knowledge discovery system for exploration of disease–gene associations through large-scale literature-wide analysis study

Knowledge and information systems, 2023-08, Vol.65 (8), p.3463-3487

2023

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Substrate specificities in Salmonella typhi outer membrane protease (PgtE) from omptin family – An in silico proteomic approach

Informatics in medicine unlocked, 2019, Vol.16, p.100237, Article 100237

2019

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Identification of potent inhibitors for Salmonella typhimurium quorum sensing via virtual screening and pharmacophore modeling

Combinatorial chemistry & high throughput screening, 2013-12, Vol.16 (10), p.826-839

2013

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Integrated meta-analysis and machine learning approach identifies acyl-CoA thioesterase with other novel genes responsible for biofilm development in Staphylococcus aureus

Infection, genetics and evolution, 2021-03, Vol.88, p.104702-104702, Article 104702

2021

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Substrate specificities in Salmonella typhi outer membrane protease (PgtE) from Omptin family – An in silico proteomic approach

Informatics in medicine unlocked, 2018, Vol.12, p.6-13

2018

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Probing intermolecular interactions and binding stability of antimicrobial peptides with beta-lactamase of Klebsiella aerogenes by comparing FDA approved beta-lactam drugs: a docking and molecular dynamics approach

Journal of biomolecular structure & dynamics, 2022-01, Vol.40 (24), p.13641-13657

2022

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Integrated regulatory network based on lncRNA-miRNA-mRNA-TF reveals key genes and sub-networks associated with dilated cardiomyopathy

Computational biology and chemistry, 2021-06, Vol.92, p.107500-107500, Article 107500

2021

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Molecular modeling and active site analysis of SdiA homolog, a putative quorum sensor for Salmonella typhimurium pathogenecity reveals specific binding patterns of AHL transcriptional regulators

Journal of molecular modeling, 2012-10, Vol.18 (10), p.4709-4719

2012

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MicroRNA mediated network motifs in autoimmune diseases and its crosstalk between genes, functions and pathways

Journal of immunological methods, 2017-01, Vol.440, p.19-26

2017

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Prediction of miRNA in Human MHC that Encodes Different Immunological Functions Using Support Vector Machines

Current bioinformatics, 2014-07, Vol.9 (3), p.343-347

2014

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Network analysis of S. aureus response to ramoplanin reveals modules for virulence factors and resistance mechanisms and characteristic novel genes

Gene, 2015-12, Vol.574 (1), p.149-162

2015

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Transcriptomic insights into heart development and cardiovascular diseases

Medicine in Omics, 2024-03, Vol.10, p.100026, Article 100026

2024

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Automatic extraction of gene-disease associations from literature using joint ensemble learning

Distributed smoothed tree kernel for protein-protein interaction extraction from the biomedical literature

RNA-Seq Analysis Reveals Resistome Genes and Signalling Pathway Associated with Vancomycin-Intermediate Staphylococcus aureus

A review on structural genomics approach applied for drug discovery against three vector-borne viral diseases: Dengue, Chikungunya and Zika

Analysis of Chromate Transporters in Bacterial Species for Cr(VI) Reduction Isolated from Tannery Effluent Contaminated Site of Dindigul District, Tamil Nadu, India

Transcriptomic meta-analysis reveals biomarker pairs and key pathways in Tetralogy of Fallot

Multiscale Laplacian graph kernel combined with lexico-syntactic patterns for biomedical event extraction from literature

Two way network construction and analysis of mRNA, miRNA and lncRNA reveals critical regulators and regulatory modules in cardiovascular diseases

Design, Synthesis and Evaluation of Antimicrobial Database-Derived Peptides Against Drug-Resistant Gram-Positive and Gram-Negative Pathogens

Classifying protein-protein interaction articles from biomedical literature using many relevant features and context-free grammar

Leveraging big data bioinformatics approaches to extract knowledge from Staphylococcus aureus public omics data

ImmunemiR - A Database of Prioritized Immune miRNA Disease Associations and its Interactome

Pancreatic lipase related protein 1 as a potential target in triglyceride breakdown: A molecular docking studies with in vitro appraisal

DisGeReExT: a knowledge discovery system for exploration of disease–gene associations through large-scale literature-wide analysis study

Substrate specificities in Salmonella typhi outer membrane protease (PgtE) from omptin family – An in silico proteomic approach

Identification of potent inhibitors for Salmonella typhimurium quorum sensing via virtual screening and pharmacophore modeling

Integrated meta-analysis and machine learning approach identifies acyl-CoA thioesterase with other novel genes responsible for biofilm development in Staphylococcus aureus

Substrate specificities in Salmonella typhi outer membrane protease (PgtE) from Omptin family – An in silico proteomic approach

Probing intermolecular interactions and binding stability of antimicrobial peptides with beta-lactamase of Klebsiella aerogenes by comparing FDA approved beta-lactam drugs: a docking and molecular dynamics approach

Integrated regulatory network based on lncRNA-miRNA-mRNA-TF reveals key genes and sub-networks associated with dilated cardiomyopathy

Molecular modeling and active site analysis of SdiA homolog, a putative quorum sensor for Salmonella typhimurium pathogenecity reveals specific binding patterns of AHL transcriptional regulators

MicroRNA mediated network motifs in autoimmune diseases and its crosstalk between genes, functions and pathways

Prediction of miRNA in Human MHC that Encodes Different Immunological Functions Using Support Vector Machines

Network analysis of S. aureus response to ramoplanin reveals modules for virulence factors and resistance mechanisms and characteristic novel genes

Transcriptomic insights into heart development and cardiovascular diseases

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