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Integration of genomic and proteomic analyses in the classification of the Siphoviridae family

Virology (New York, N.Y.), 2015-03, Vol.477, p.144-154

2015

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Supersize me: Cronobacter sakazakii phage GAP32

Virology (New York, N.Y.), 2014-07, Vol.460, p.138-146

2014

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MOB-suite: software tools for clustering, reconstruction and typing of plasmids from draft assemblies

Microbial genomics, 2018-08, Vol.4 (8)

2018

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Analysis of the Actinobacillus pleuropneumoniae ArcA Regulon Identifies Fumarate Reductase as a Determinant of Virulence

Infection and Immunity, 2008-06, Vol.76 (6), p.2284-2295

2008

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Analysis of the Actinobacillus pleuropneumoniae HlyX (FNR) regulon and identification of iron-regulated protein B as an essential virulence factor

Proteomics (Weinheim), 2009-05, Vol.9 (9), p.2383-2398

2009

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The Salmonella In Silico Typing Resource (SISTR): An Open Web-Accessible Tool for Rapidly Typing and Subtyping Draft Salmonella Genome Assemblies

PloS one, 2016-01, Vol.11 (1), p.e0147101-e0147101

2016

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Universal whole-sequence-based plasmid typing and its utility to prediction of host range and epidemiological surveillance

Microbial genomics, 2020-10, Vol.6 (10)

2020

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Epidemiology, Relative Invasive Ability, Molecular Characterization, and Competitive Performance of Campylobacter jejuni Strains in the Chicken Gut

Applied and Environmental Microbiology, 2007-12, Vol.73 (24), p.7959-7966

2007

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On-Farm Anaerobic Digestion of Dairy Manure Reduces the Abundance of Antibiotic Resistance-Associated Gene Targets and the Potential for Plasmid Transfer

Applied and environmental microbiology, 2021-06, Vol.87 (14), p.e0298020-e0298020

2021

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Dissemination of the mcr-1 colistin resistance gene

The Lancet infectious diseases, 2016-03, Vol.16 (3), p.289-290

2016

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Evaluation of Molecular Methods for Identification of Salmonella Serovars

Journal of clinical microbiology, 2016-08, Vol.54 (8), p.1992-1998

2016

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Development of a multi-locus typing scheme for an Enterobacteriaceae linear plasmid that mediates inter-species transfer of flagella

PloS one, 2019-11, Vol.14 (11), p.e0218638-e0218638

2019

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Four Escherichia coli O157:H7 phages: a new bacteriophage genus and taxonomic classification of T1-like phages

PloS one, 2014-06, Vol.9 (6), p.e100426-e100426

2014

Volltextzugriff (PDF)

Romulus and Remus, Two Phage Isolates Representing a Distinct Clade within the Twortlikevirus Genus, Display Suitable Properties for Phage Therapy Applications

Journal of Virology, 2013-03, Vol.87 (6), p.3237-3247

2013

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ECTyper: in silico Escherichia coli serotype and species prediction from raw and assembled whole-genome sequence data

Microbial genomics, 2021-12, Vol.7 (12)

2021

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Genome sequence of adherent-invasive Escherichia coli and comparative genomic analysis with other E. coli pathotypes

BMC genomics, 2010-11, Vol.11 (1), p.667-667, Article 667

2010

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The Validation and Implications of Using Whole Genome Sequencing as a Replacement for Traditional Serotyping for a National Salmonella Reference Laboratory

Frontiers in microbiology, 2017-06, Vol.8, p.1044-1044

2017

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A global survey of Salmonella plasmids and their associations with antimicrobial resistance

Microbial genomics, 2023-05, Vol.9 (5)

2023

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The genome of Aeromonas salmonicida subsp. salmonicida A449: insights into the evolution of a fish pathogen

BMC genomics, 2008-09, Vol.9 (1), p.427-427

2008

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An improved DNA array-based classification method for the identification of Salmonella serotypes shows high concordance between traditional and genotypic testing

PloS one, 2018-12, Vol.13 (12), p.e0207550-e0207550

2018

Volltextzugriff (PDF)

Taxonomic reassessment of N4-like viruses using comparative genomics and proteomics suggests a new subfamily - “Enquartavirinae”

Archives of virology, 2015-12, Vol.160 (12), p.3053-3062

2015

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Harnessing natural transformation in Actinobacillus pleuropneumoniae: a simple method for allelic replacements

FEMS microbiology letters, 2004-04, Vol.233 (2), p.277-281

2004

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Host-Pathogen Interactions of Actinobacillus pleuropneumoniae with Porcine Lung and Tracheal Epithelial Cells

Infection and Immunity, 2009-04, Vol.77 (4), p.1426-1441

2009

Volltextzugriff (PDF)

Development and Validation of a Comparative Genomic Fingerprinting Method for High-Resolution Genotyping of Campylobacter jejuni

Journal of Clinical Microbiology, 2012-03, Vol.50 (3), p.788-797

2012

Volltextzugriff (PDF)

Mobility of β-Lactam Resistance Under Bacterial Co-infection and Ampicillin Treatment in a Mouse Model

Frontiers in microbiology, 2020-07, Vol.11, p.1591-1591

2020

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Integration of genomic and proteomic analyses in the classification of the Siphoviridae family

Supersize me: Cronobacter sakazakii phage GAP32

MOB-suite: software tools for clustering, reconstruction and typing of plasmids from draft assemblies

Analysis of the Actinobacillus pleuropneumoniae ArcA Regulon Identifies Fumarate Reductase as a Determinant of Virulence

Analysis of the Actinobacillus pleuropneumoniae HlyX (FNR) regulon and identification of iron-regulated protein B as an essential virulence factor

The Salmonella In Silico Typing Resource (SISTR): An Open Web-Accessible Tool for Rapidly Typing and Subtyping Draft Salmonella Genome Assemblies

Universal whole-sequence-based plasmid typing and its utility to prediction of host range and epidemiological surveillance

Epidemiology, Relative Invasive Ability, Molecular Characterization, and Competitive Performance of Campylobacter jejuni Strains in the Chicken Gut

On-Farm Anaerobic Digestion of Dairy Manure Reduces the Abundance of Antibiotic Resistance-Associated Gene Targets and the Potential for Plasmid Transfer

Dissemination of the mcr-1 colistin resistance gene

Evaluation of Molecular Methods for Identification of Salmonella Serovars

Development of a multi-locus typing scheme for an Enterobacteriaceae linear plasmid that mediates inter-species transfer of flagella

Four Escherichia coli O157:H7 phages: a new bacteriophage genus and taxonomic classification of T1-like phages

Romulus and Remus, Two Phage Isolates Representing a Distinct Clade within the Twortlikevirus Genus, Display Suitable Properties for Phage Therapy Applications

ECTyper: in silico Escherichia coli serotype and species prediction from raw and assembled whole-genome sequence data

Genome sequence of adherent-invasive Escherichia coli and comparative genomic analysis with other E. coli pathotypes

The Validation and Implications of Using Whole Genome Sequencing as a Replacement for Traditional Serotyping for a National Salmonella Reference Laboratory

A global survey of Salmonella plasmids and their associations with antimicrobial resistance

The genome of Aeromonas salmonicida subsp. salmonicida A449: insights into the evolution of a fish pathogen

An improved DNA array-based classification method for the identification of Salmonella serotypes shows high concordance between traditional and genotypic testing

Taxonomic reassessment of N4-like viruses using comparative genomics and proteomics suggests a new subfamily - “Enquartavirinae”

Harnessing natural transformation in Actinobacillus pleuropneumoniae: a simple method for allelic replacements

Host-Pathogen Interactions of Actinobacillus pleuropneumoniae with Porcine Lung and Tracheal Epithelial Cells

Development and Validation of a Comparative Genomic Fingerprinting Method for High-Resolution Genotyping of Campylobacter jejuni

Mobility of β-Lactam Resistance Under Bacterial Co-infection and Ampicillin Treatment in a Mouse Model

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