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Automated Subcellular Location Determination and High-Throughput Microscopy

Developmental cell, 2007-01, Vol.12 (1), p.7-16

2007

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Conserved non-AUG uORFs revealed by a novel regression analysis of ribosome profiling data

Genome research, 2018-02, Vol.28 (2), p.214-222

2018

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The copper transporter Ctr1 contributes to cisplatin uptake by renal tubular cells during cisplatin nephrotoxicity

American Journal of Physiology - Renal Physiology, 2009-03, Vol.296 (3), p.F505-F511

2009

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The Crankshaft Phenomenon

Journal of the American Academy of Orthopaedic Surgeons, 2017-09, Vol.25 (9), p.e185-e193

2017

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Learning the sequence of influenza A genome assembly during viral replication using point process models and fluorescence in situ hybridization

PLoS computational biology, 2019-01, Vol.15 (1), p.e1006199-e1006199

2019

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Online Mathematics Homework Increases Student Achievement

AERA open, 2016-10, Vol.2 (4), p.233285841667396

2016

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Automated analysis of immunohistochemistry images identifies candidate location biomarkers for cancers

Proceedings of the National Academy of Sciences - PNAS, 2014-12, Vol.111 (51), p.18249-18254

2014

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Automated Image Analysis for High-Content Screening and Analysis

Journal of biomolecular screening, 2010-08, Vol.15 (7), p.726-734

2010

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Complications following spine fusion for adolescent idiopathic scoliosis

Current reviews in musculoskeletal medicine, 2016-12, Vol.9 (4), p.462-469

2016

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Symptomatic Venous Thromboembolism After Adolescent Knee Arthroscopy

Journal of pediatric orthopaedics, 2019-03, Vol.39 (3), p.125-129

2019

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Efficient modeling and active learning discovery of biological responses

PloS one, 2013-12, Vol.8 (12), p.e83996-e83996

2013

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Automated Learning of Subcellular Variation among Punctate Protein Patterns and a Generative Model of Their Relation to Microtubules

PLoS computational biology, 2015-12, Vol.11 (12), p.e1004614-e1004614

2015

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Evaluation of methods for generative modeling of cell and nuclear shape

Bioinformatics, 2019-07, Vol.35 (14), p.2475-2485

2019

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Glucarpidase, Leucovorin, and Thymidine for High-Dose Methotrexate-Induced Renal Dysfunction: Clinical and Pharmacologic Factors Affecting Outcome

Journal of clinical oncology, 2010-09, Vol.28 (25), p.3979-3986

2010

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Determining the subcellular location of new proteins from microscope images using local features

Bioinformatics, 2013-09, Vol.29 (18), p.2343-2349

2013

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Active machine learning-driven experimentation to determine compound effects on protein patterns

eLife, 2016-02, Vol.5, p.e10047-e10047

2016

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Evaluation of cell segmentation methods without reference segmentations

Molecular biology of the cell, 2023-05, Vol.34 (6), p.ar50-ar50

2023

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Expanding the coverage of spatial proteomics: a machine learning approach

Bioinformatics (Oxford, England), 2024-02, Vol.40 (2)

2024

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Unbiased Rare Event Sampling in Spatial Stochastic Systems Biology Models Using a Weighted Ensemble of Trajectories

PLoS computational biology, 2016-02, Vol.12 (2), p.e1004611-e1004611

2016

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An active role for machine learning in drug development

Nature chemical biology, 2011-06, Vol.7 (6), p.327-330

Murphy, Robert F

2011

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How Have Alternative Bearings and Modularity Affected Revision Rates in Total Hip Arthroplasty?

Clinical orthopaedics and related research, 2014-12, Vol.472 (12), p.3747-3758

2014

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Nuclear segmentation in microscope cell images: A hand-segmented dataset and comparison of algorithms

2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2009-01, Vol.5193098, p.518-521

2009

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Estimating microtubule distributions from 2D immunofluorescence microscopy images reveals differences among human cultured cell lines

PloS one, 2012-11, Vol.7 (11), p.e50292-e50292

2012

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Orthobiologics in Pediatric Orthopedics

The Orthopedic clinics of North America, 2017-07, Vol.48 (3), p.323-331

2017

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Degradation of protein translation machinery by amino acid starvation-induced macroautophagy

Autophagy, 2017-06, Vol.13 (6), p.1064-1075

2017

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Automated Subcellular Location Determination and High-Throughput Microscopy

Conserved non-AUG uORFs revealed by a novel regression analysis of ribosome profiling data

The copper transporter Ctr1 contributes to cisplatin uptake by renal tubular cells during cisplatin nephrotoxicity

The Crankshaft Phenomenon

Learning the sequence of influenza A genome assembly during viral replication using point process models and fluorescence in situ hybridization

Online Mathematics Homework Increases Student Achievement

Automated analysis of immunohistochemistry images identifies candidate location biomarkers for cancers

Automated Image Analysis for High-Content Screening and Analysis

Complications following spine fusion for adolescent idiopathic scoliosis

Symptomatic Venous Thromboembolism After Adolescent Knee Arthroscopy

Efficient modeling and active learning discovery of biological responses

Automated Learning of Subcellular Variation among Punctate Protein Patterns and a Generative Model of Their Relation to Microtubules

Evaluation of methods for generative modeling of cell and nuclear shape

Glucarpidase, Leucovorin, and Thymidine for High-Dose Methotrexate-Induced Renal Dysfunction: Clinical and Pharmacologic Factors Affecting Outcome

Determining the subcellular location of new proteins from microscope images using local features

Active machine learning-driven experimentation to determine compound effects on protein patterns

Evaluation of cell segmentation methods without reference segmentations

Expanding the coverage of spatial proteomics: a machine learning approach

Unbiased Rare Event Sampling in Spatial Stochastic Systems Biology Models Using a Weighted Ensemble of Trajectories

An active role for machine learning in drug development

How Have Alternative Bearings and Modularity Affected Revision Rates in Total Hip Arthroplasty?

Nuclear segmentation in microscope cell images: A hand-segmented dataset and comparison of algorithms

Estimating microtubule distributions from 2D immunofluorescence microscopy images reveals differences among human cultured cell lines

Orthobiologics in Pediatric Orthopedics

Degradation of protein translation machinery by amino acid starvation-induced macroautophagy

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