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Understanding flavin electronic structure and spectra

Wiley interdisciplinary reviews. Computational molecular science, 2022-03, Vol.12 (2), p.e1541-n/a

2022

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Halogenation of tyrosine perturbs large-scale protein self-organization

Nature communications, 2022-08, Vol.13 (1), p.4843-4843, Article 4843

2022

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The Chromophore Structural Changes during the Photocycle of Phytochrome: A Combined Resonance Raman and Quantum Chemical Approach

Accounts of chemical research, 2007-04, Vol.40 (4), p.258-266

2007

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Resonance Raman Spectroscopy as a Tool to Monitor the Active Site of Hydrogenases

Angewandte Chemie (International ed.), 2013-05, Vol.52 (19), p.5162-5165

International ed. in English, 2013

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Carbon Monoxide Dehydrogenase Reduces Cyanate to Cyanide

Angewandte Chemie International Edition, 2017-06, Vol.56 (26), p.7398-7401

International ed. in English, 2017

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Dynamic Nuclear Polarization Provides New Insights into Chromophore Structure in Phytochrome Photoreceptors

Angewandte Chemie (International ed.), 2016-12, Vol.55 (52), p.16017-16020

International ed. in English, 2016

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The role of local and remote amino acid substitutions for optimizing fluorescence in bacteriophytochromes: A case study on iRFP

Scientific reports, 2016-06, Vol.6 (1), p.28444-28444, Article 28444

2016

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QM/MM computations reveal details of the acetyl-CoA synthase catalytic center

Biochimica et biophysica acta. General subjects, 2020-07, Vol.1864 (7), p.129579-129579, Article 129579

2020

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Proton Transfer Pathways between Active Sites and Proximal Clusters in the Membrane-Bound [NiFe] Hydrogenase

The journal of physical chemistry. B, 2019-04, Vol.123 (16), p.3409-3420

2019

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Noncovalent interactions that tune the reactivities of the flavins in bifurcating electron transferring flavoprotein

The Journal of biological chemistry, 2023-06, Vol.299 (6), p.104762-104762, Article 104762

2023

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Chromophore Heterogeneity and Photoconversion in Phytochrome Crystals and Solution Studied by Resonance Raman Spectroscopy

Angewandte Chemie (International ed.), 2008-06, Vol.47 (25), p.4753-4755

2008

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Red, Orange, Green: Light- and Temperature-Dependent Color Tuning in a Cyanobacteriochrome

Biochemistry (Easton), 2020-02, Vol.59 (4), p.509-519

2020

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Real-time observation of tetrapyrrole binding to an engineered bacterial phytochrome

Communications chemistry, 2021-01, Vol.4 (1), p.3-3, Article 3

2021

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Structural snapshot of a bacterial phytochrome in its functional intermediate state

Nature communications, 2018-11, Vol.9 (1), p.4912-13, Article 4912

2018

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FTIR Study of the Photoinduced Processes of Plant Phytochrome Phya using Isotope-Labeled Bilins and Density Functional Theory Calculations

Biophysical journal, 2008-08, Vol.95 (3), p.1256-1267

2008

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On the Role of a Conserved Tryptophan in the Chromophore Pocket of Cyanobacteriochrome

Journal of molecular biology, 2024-03, Vol.436 (5), p.168227, Article 168227

2024

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Multi-structural molecular docking (MOD) combined with molecular dynamics reveal the structural requirements of designing broad-spectrum inhibitors of SARS-CoV-2 entry to host cells

Scientific reports, 2023-09, Vol.13 (1), p.16387-16387, Article 16387

2023

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Structure of the Full-Length Bacteriophytochrome from the Plant Pathogen Xanthomonas campestris Provides Clues to its Long-Range Signaling Mechanism

Journal of molecular biology, 2016-09, Vol.428 (19), p.3702-3720

2016

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Structure of the Cyanobacterial Phytochrome 2 Photosensor Implies a Tryptophan Switch for Phytochrome Signaling

The Journal of biological chemistry, 2013-12, Vol.288 (50), p.35714-35725

2013

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Tracking the route of molecular oxygen in O₂-tolerant membrane-bound [NiFe] hydrogenase

Proceedings of the National Academy of Sciences - PNAS, 2018-03, Vol.115 (10), p.E2229-E2237

2018

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Protonation-Dependent Structural Heterogeneity in the Chromophore Binding Site of Cyanobacterial Phytochrome Cph1

The journal of physical chemistry. B, 2017-01, Vol.121 (1), p.47-57

2017

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A protonation-coupled feedback mechanism controls the signalling process in bathy phytochromes

Nature chemistry, 2015-05, Vol.7 (5), p.423-430

2015

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The Photoreactions of Recombinant Phytochrome CphA from the Cyanobacterium Calothrix PCC7601: A Low-Temperature UV-Vis and FTIR Study

Photochemistry and photobiology, 2009-01, Vol.85 (1), p.239-249

2009

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Reversible Active Site Sulfoxygenation Can Explain the Oxygen Tolerance of a NAD+‑Reducing [NiFe] Hydrogenase and Its Unusual Infrared Spectroscopic Properties

Journal of the American Chemical Society, 2015-02, Vol.137 (7), p.2555-2564

2015

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Photoconversion Mechanism of the Second GAF Domain of Cyanobacteriochrome AnPixJ and the Cofactor Structure of Its Green-Absorbing State

Biochemistry (Easton), 2013-07, Vol.52 (29), p.4871-4880

2013

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Understanding flavin electronic structure and spectra

Halogenation of tyrosine perturbs large-scale protein self-organization

The Chromophore Structural Changes during the Photocycle of Phytochrome: A Combined Resonance Raman and Quantum Chemical Approach

Resonance Raman Spectroscopy as a Tool to Monitor the Active Site of Hydrogenases

Carbon Monoxide Dehydrogenase Reduces Cyanate to Cyanide

Dynamic Nuclear Polarization Provides New Insights into Chromophore Structure in Phytochrome Photoreceptors

The role of local and remote amino acid substitutions for optimizing fluorescence in bacteriophytochromes: A case study on iRFP

QM/MM computations reveal details of the acetyl-CoA synthase catalytic center

Proton Transfer Pathways between Active Sites and Proximal Clusters in the Membrane-Bound [NiFe] Hydrogenase

Noncovalent interactions that tune the reactivities of the flavins in bifurcating electron transferring flavoprotein

Chromophore Heterogeneity and Photoconversion in Phytochrome Crystals and Solution Studied by Resonance Raman Spectroscopy

Red, Orange, Green: Light- and Temperature-Dependent Color Tuning in a Cyanobacteriochrome

Real-time observation of tetrapyrrole binding to an engineered bacterial phytochrome

Structural snapshot of a bacterial phytochrome in its functional intermediate state

FTIR Study of the Photoinduced Processes of Plant Phytochrome Phya using Isotope-Labeled Bilins and Density Functional Theory Calculations

On the Role of a Conserved Tryptophan in the Chromophore Pocket of Cyanobacteriochrome

Multi-structural molecular docking (MOD) combined with molecular dynamics reveal the structural requirements of designing broad-spectrum inhibitors of SARS-CoV-2 entry to host cells

Structure of the Full-Length Bacteriophytochrome from the Plant Pathogen Xanthomonas campestris Provides Clues to its Long-Range Signaling Mechanism

Structure of the Cyanobacterial Phytochrome 2 Photosensor Implies a Tryptophan Switch for Phytochrome Signaling

Tracking the route of molecular oxygen in O₂-tolerant membrane-bound [NiFe] hydrogenase

Protonation-Dependent Structural Heterogeneity in the Chromophore Binding Site of Cyanobacterial Phytochrome Cph1

A protonation-coupled feedback mechanism controls the signalling process in bathy phytochromes

The Photoreactions of Recombinant Phytochrome CphA from the Cyanobacterium Calothrix PCC7601: A Low-Temperature UV-Vis and FTIR Study

Reversible Active Site Sulfoxygenation Can Explain the Oxygen Tolerance of a NAD+‑Reducing [NiFe] Hydrogenase and Its Unusual Infrared Spectroscopic Properties

Photoconversion Mechanism of the Second GAF Domain of Cyanobacteriochrome AnPixJ and the Cofactor Structure of Its Green-Absorbing State

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