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EBV Noncoding RNA Binds Nascent RNA to Drive Host PAX5 to Viral DNA

Cell, 2015-02, Vol.160 (4), p.607-618

2015

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Probing Xist RNA Structure in Cells Using Targeted Structure-Seq

PLoS genetics, 2015-12, Vol.11 (12), p.e1005668-e1005668

2015

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The Epstein Barr virus circRNAome

PLoS pathogens, 2018-08, Vol.14 (8), p.e1007206

2018

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RNA2DMut: a web tool for the design and analysis of RNA structure mutations

RNA (Cambridge), 2018-03, Vol.24 (3), p.273-286

Moss, Walter N

2018

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SARS-CoV-2 expresses a microRNA-like small RNA able to selectively repress host genes

Proceedings of the National Academy of Sciences - PNAS, 2021-12, Vol.118 (52), p.1

2021

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Genome-wide analyses of Epstein-Barr virus reveal conserved RNA structures and a novel stable intronic sequence RNA

BMC genomics, 2013-08, Vol.14 (1), p.543-543

2013

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Viral noncoding RNAs: more surprises

Genes & development, 2015-03, Vol.29 (6), p.567-584

2015

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Analyses of human cancer driver genes uncovers evolutionarily conserved RNA structural elements involved in posttranscriptional control

PloS one, 2022-02, Vol.17 (2), p.e0264025-e0264025

2022

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Precise small-molecule cleavage of an r(CUG) repeat expansion in a myotonic dystrophy mouse model

Proceedings of the National Academy of Sciences - PNAS, 2019-04, Vol.116 (16), p.7799-7804

2019

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Mapping the RNA structural landscape of viral genomes

Methods (San Diego, Calif.), 2020-11, Vol.183, p.57-67

2020

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The 3' splice site of influenza A segment 7 mRNA can exist in two conformations: a pseudoknot and a hairpin

PloS one, 2012-06, Vol.7 (6), p.e38323

2012

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Design of small molecules targeting RNA structure from sequence

Chemical Society reviews, 2020-10, Vol.49 (2), p.7252-727

2020

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The RNA encoding the microtubule-associated protein tau has extensive structure that affects its biology

PloS one, 2019-07, Vol.14 (7), p.e0219210-e0219210

2019

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RNAStructuromeDB: A genome-wide database for RNA structural inference

Scientific reports, 2017-12, Vol.7 (1), p.17269-13, Article 17269

2017

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RNA structural analysis of the MYC mRNA reveals conserved motifs that affect gene expression

PloS one, 2019-06, Vol.14 (6), p.e0213758-e0213758

2019

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ScanFold: an approach for genome-wide discovery of local RNA structural elements-applications to Zika virus and HIV

PeerJ (San Francisco, CA), 2018-12, Vol.6, p.e6136-e6136, Article e6136

2018

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The RNA secondary structure of androgen receptor-FL and V7 transcripts reveals novel regulatory regions

Nucleic acids research, 2024-06, Vol.52 (11), p.6596-6613

2024

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Targeting the SARS-CoV‑2 RNA Genome with Small Molecule Binders and Ribonuclease Targeting Chimera (RIBOTAC) Degraders

ACS central science, 2020-10, Vol.6 (10), p.1713-1721

2020

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Identification of MYC intron 2 regions that modulate expression

PloS one, 2024-01, Vol.19 (1), p.e0296889-e0296889

2024

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Self-Folding of Naked Segment 8 Genomic RNA of Influenza A Virus

PloS one, 2016-02, Vol.11 (2), p.e0148281-e0148281

2016

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Translation of the intrinsically disordered protein α-synuclein is inhibited by a small molecule targeting its structured mRNA

Proceedings of the National Academy of Sciences - PNAS, 2020-01, Vol.117 (3), p.1457-1467

2020

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In silico analysis of local RNA secondary structure in influenza virus A, B and C finds evidence of widespread ordered stability but little evidence of significant covariation

Scientific reports, 2022-01, Vol.12 (1), p.310-310, Article 310

2022

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Sequences at gene segment termini inclusive of untranslated regions and partial open reading frames play a critical role in mammalian orthoreovirus S gene packaging

PLoS pathogens, 2024-02, Vol.20 (2), p.e1012037-e1012037

2024

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Universal and strain specific structure features of segment 8 genomic RNA of influenza A virus—application of 4-thiouridine photocrosslinking

The Journal of biological chemistry, 2021-12, Vol.297 (6), p.101245, Article 101245

2021

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Transcriptome-Wide Mapping of Small-Molecule RNA-Binding Sites in Cells Informs an Isoform-Specific Degrader of QSOX1 mRNA

Journal of the American Chemical Society, 2022-07, Vol.144 (26), p.11620-11625

2022

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EBV Noncoding RNA Binds Nascent RNA to Drive Host PAX5 to Viral DNA

Probing Xist RNA Structure in Cells Using Targeted Structure-Seq

The Epstein Barr virus circRNAome

RNA2DMut: a web tool for the design and analysis of RNA structure mutations

SARS-CoV-2 expresses a microRNA-like small RNA able to selectively repress host genes

Genome-wide analyses of Epstein-Barr virus reveal conserved RNA structures and a novel stable intronic sequence RNA

Viral noncoding RNAs: more surprises

Analyses of human cancer driver genes uncovers evolutionarily conserved RNA structural elements involved in posttranscriptional control

Precise small-molecule cleavage of an r(CUG) repeat expansion in a myotonic dystrophy mouse model

Mapping the RNA structural landscape of viral genomes

The 3' splice site of influenza A segment 7 mRNA can exist in two conformations: a pseudoknot and a hairpin

Design of small molecules targeting RNA structure from sequence

The RNA encoding the microtubule-associated protein tau has extensive structure that affects its biology

RNAStructuromeDB: A genome-wide database for RNA structural inference

RNA structural analysis of the MYC mRNA reveals conserved motifs that affect gene expression

ScanFold: an approach for genome-wide discovery of local RNA structural elements-applications to Zika virus and HIV

The RNA secondary structure of androgen receptor-FL and V7 transcripts reveals novel regulatory regions

Targeting the SARS-CoV‑2 RNA Genome with Small Molecule Binders and Ribonuclease Targeting Chimera (RIBOTAC) Degraders

Identification of MYC intron 2 regions that modulate expression

Self-Folding of Naked Segment 8 Genomic RNA of Influenza A Virus

Translation of the intrinsically disordered protein α-synuclein is inhibited by a small molecule targeting its structured mRNA

In silico analysis of local RNA secondary structure in influenza virus A, B and C finds evidence of widespread ordered stability but little evidence of significant covariation

Sequences at gene segment termini inclusive of untranslated regions and partial open reading frames play a critical role in mammalian orthoreovirus S gene packaging

Universal and strain specific structure features of segment 8 genomic RNA of influenza A virus—application of 4-thiouridine photocrosslinking

Transcriptome-Wide Mapping of Small-Molecule RNA-Binding Sites in Cells Informs an Isoform-Specific Degrader of QSOX1 mRNA

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