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Interplay between A-to-I Editing and Splicing of RNA: A Potential Point of Application for Cancer Therapy

International journal of molecular sciences, 2022-05, Vol.23 (9), p.5240

2022

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Identification of Alternative Splicing in Proteomes of Human Melanoma Cell Lines without RNA Sequencing Data

International journal of molecular sciences, 2023-01, Vol.24 (3), p.2466

2023

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Blood Plasma Proteome: A Meta-Analysis of the Results of Protein Quantification in Human Blood by Targeted Mass Spectrometry

International journal of molecular sciences, 2023-01, Vol.24 (1), p.769

2023

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Multiomic Profiling Identified EGF Receptor Signaling as a Potential Inhibitor of Type I Interferon Response in Models of Oncolytic Therapy by Vesicular Stomatitis Virus

International journal of molecular sciences, 2022-05, Vol.23 (9), p.5244

2022

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Analysis of candidate genes expected to be essential for melanoma surviving

Cancer cell international, 2020-10, Vol.20 (1), p.488-488, Article 488

2020

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Proteogenomics of Malignant Melanoma Cell Lines: The Effect of Stringency of Exome Data Filtering on Variant Peptide Identification in Shotgun Proteomics

Journal of proteome research, 2018-05, Vol.17 (5), p.1801-1811

2018

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Ovarian cancer marker of 11.7 kDa detected by proteomics is a serum amyloid A1

Proteomics (Weinheim), 2005-09, Vol.5 (14), p.3790-3797

2005

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Identification-Free Control over the Precursor Isotopic Mass Misassignment in Orbitrap-Based Proteomics

Journal of the American Society for Mass Spectrometry, 2021-01, Vol.32 (1), p.218-224

2021

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Vexitoxins: conotoxin-like venom peptides from predatory gastropods of the genus Vexillum

Proceedings of the Royal Society. B, Biological sciences, 2022-08, Vol.289 (1980), p.20221152

2022

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Electrochemical biosensor for trypsin activity assay based on cleavage of immobilized tyrosine-containing peptide

Talanta (Oxford), 2023-05, Vol.257, p.124341-124341, Article 124341

2023

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RNA Editing by ADAR Adenosine Deaminases in the Cell Models of CAG Repeat Expansion Diseases: Significant Effect of Differentiation from Stem Cells into Brain Organoids in the Absence of Substantial Influence of CAG Repeats on the Level of Editing

Biochemistry (Moscow), 2024-08, Vol.89 (8), p.1474-1489

2024

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Proteomic Analysis of Zebrafish Protein Recoding via mRNA Editing by ADAR Enzymes

Biochemistry (Moscow), 2022-11, Vol.87 (11), p.1301-1309

2022

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Massive Proteogenomic Reanalysis of Publicly Available Proteomic Datasets of Human Tissues in Search for Protein Recoding via Adenosine-to-Inosine RNA Editing

Journal of proteome research, 2023-06, Vol.22 (6), p.1695-1711

2023

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Human aqueous humor proteome in cataract, glaucoma, and pseudoexfoliation syndrome

Proteomics (Weinheim), 2016-07, Vol.16 (13), p.1938-1946

2016

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Adenosine‐to‐Inosine RNA Editing in Mouse and Human Brain Proteomes

Proteomics (Weinheim), 2019-12, Vol.19 (23), p.e1900195-n/a

2019

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Validating Amino Acid Variants in Proteogenomics Using Sequence Coverage by Multiple Reads

Journal of proteome research, 2022-06, Vol.21 (6), p.1438-1448

2022

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Cysteine alkylation methods in shotgun proteomics and their possible effects on methionine residues

Journal of proteomics, 2021-01, Vol.231, p.104022-104022, Article 104022

2021

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Profiling modifications for glioblastoma proteome using ultra-tolerant database search: Are the peptide mass shifts biologically relevant or chemically induced?

Journal of proteomics, 2019-01, Vol.191, p.16-21

2019

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Proteome-Wide Analysis of ADAR-Mediated Messenger RNA Editing during Fruit Fly Ontogeny

Journal of proteome research, 2020-10, Vol.19 (10), p.4046-4060

2020

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Method for Identification of Threonine Isoforms in Peptides by Ultraviolet Photofragmentation of Cold Ions

Analytical chemistry (Washington), 2019-05, Vol.91 (10), p.6709-6715

2019

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Multi-Omics Analysis of Glioblastoma Cells’ Sensitivity to Oncolytic Viruses

Cancers, 2021-10, Vol.13 (21), p.5268

2021

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Comparison of False Discovery Rate Control Strategies for Variant Peptide Identifications in Shotgun Proteogenomics

Journal of proteome research, 2017-05, Vol.16 (5), p.1936-1943

2017

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FractionOptimizer: a method for optimal peptide fractionation in bottom-up proteomics

Analytical and bioanalytical chemistry, 2018-06, Vol.410 (16), p.3827-3833

2018

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Targeted Quantitative Screening of Chromosome 18 Encoded Proteome in Plasma Samples of Astronaut Candidates

Journal of proteome research, 2016-11, Vol.15 (11), p.4039-4046

2016

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Brochosomins and other novel proteins from brochosomes of leafhoppers (Insecta, Hemiptera, Cicadellidae)

Insect biochemistry and molecular biology, 2018-03, Vol.94, p.10-17

2018

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Interplay between A-to-I Editing and Splicing of RNA: A Potential Point of Application for Cancer Therapy

Identification of Alternative Splicing in Proteomes of Human Melanoma Cell Lines without RNA Sequencing Data

Blood Plasma Proteome: A Meta-Analysis of the Results of Protein Quantification in Human Blood by Targeted Mass Spectrometry

Multiomic Profiling Identified EGF Receptor Signaling as a Potential Inhibitor of Type I Interferon Response in Models of Oncolytic Therapy by Vesicular Stomatitis Virus

Analysis of candidate genes expected to be essential for melanoma surviving

Proteogenomics of Malignant Melanoma Cell Lines: The Effect of Stringency of Exome Data Filtering on Variant Peptide Identification in Shotgun Proteomics

Ovarian cancer marker of 11.7 kDa detected by proteomics is a serum amyloid A1

Identification-Free Control over the Precursor Isotopic Mass Misassignment in Orbitrap-Based Proteomics

Vexitoxins: conotoxin-like venom peptides from predatory gastropods of the genus Vexillum

Electrochemical biosensor for trypsin activity assay based on cleavage of immobilized tyrosine-containing peptide

RNA Editing by ADAR Adenosine Deaminases in the Cell Models of CAG Repeat Expansion Diseases: Significant Effect of Differentiation from Stem Cells into Brain Organoids in the Absence of Substantial Influence of CAG Repeats on the Level of Editing

Proteomic Analysis of Zebrafish Protein Recoding via mRNA Editing by ADAR Enzymes

Massive Proteogenomic Reanalysis of Publicly Available Proteomic Datasets of Human Tissues in Search for Protein Recoding via Adenosine-to-Inosine RNA Editing

Human aqueous humor proteome in cataract, glaucoma, and pseudoexfoliation syndrome

Adenosine‐to‐Inosine RNA Editing in Mouse and Human Brain Proteomes

Validating Amino Acid Variants in Proteogenomics Using Sequence Coverage by Multiple Reads

Cysteine alkylation methods in shotgun proteomics and their possible effects on methionine residues

Profiling modifications for glioblastoma proteome using ultra-tolerant database search: Are the peptide mass shifts biologically relevant or chemically induced?

Proteome-Wide Analysis of ADAR-Mediated Messenger RNA Editing during Fruit Fly Ontogeny

Method for Identification of Threonine Isoforms in Peptides by Ultraviolet Photofragmentation of Cold Ions

Multi-Omics Analysis of Glioblastoma Cells’ Sensitivity to Oncolytic Viruses

Comparison of False Discovery Rate Control Strategies for Variant Peptide Identifications in Shotgun Proteogenomics

FractionOptimizer: a method for optimal peptide fractionation in bottom-up proteomics

Targeted Quantitative Screening of Chromosome 18 Encoded Proteome in Plasma Samples of Astronaut Candidates

Brochosomins and other novel proteins from brochosomes of leafhoppers (Insecta, Hemiptera, Cicadellidae)

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