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Transcriptome-wide profiling of multiple RNA modifications simultaneously at single-base resolution

Proceedings of the National Academy of Sciences - PNAS, 2019-04, Vol.116 (14), p.6784-6789

2019

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Exosome-delivered microRNAs modulate the inflammatory response to endotoxin

Nature communications, 2015-06, Vol.6 (1), p.7321-7321, Article 7321

2015

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The Lineage-Defining Transcription Factors SOX2 and NKX2-1 Determine Lung Cancer Cell Fate and Shape the Tumor Immune Microenvironment

Immunity (Cambridge, Mass.), 2018-10, Vol.49 (4), p.764-779.e9

2018

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A Stat1 bound enhancer promotes Nampt expression and function within tumor associated macrophages

Nature communications, 2021-05, Vol.12 (1), p.2620-19, Article 2620

2021

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Genome-Wide CRISPR-Cas9 Screen Identifies MicroRNAs That Regulate Myeloid Leukemia Cell Growth

PloS one, 2016-04, Vol.11 (4), p.e0153689-e0153689

2016

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FoxA1 and FoxA2 drive gastric differentiation and suppress squamous identity in NKX2-1-negative lung cancer

eLife, 2018-11, Vol.7

2018

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Active BRAF-V600E is the key player in generation of a sessile serrated polyp-specific DNA methylation profile

PloS one, 2018-03, Vol.13 (3), p.e0192499-e0192499

2018

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MEK Inhibitors Reverse Growth of Embryonal Brain Tumors Derived from Oligoneural Precursor Cells

Cell reports (Cambridge), 2016-10, Vol.17 (5), p.1255-1264

2016

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A combination of HLA-DP α and β chain polymorphisms paired with a SNP in the DPB1 3' UTR region, denoting expression levels, are associated with atopic dermatitis

Frontiers in genetics, 2023, Vol.14, p.1004138-1004138

2023

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Large-Scale Candidate Gene Analysis of Spontaneous Clearance of Hepatitis C Virus

The Journal of infectious diseases, 2010-05, Vol.201 (9), p.1371-1380

2010

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Cytotoxic T-Lymphocyte Antigen 4 Gene and Recovery from Hepatitis B Virus Infection

Journal of Virology, 2004-10, Vol.78 (20), p.11258-11262

2004

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Utilizing nanopore sequencing technology for the rapid and comprehensive characterization of eleven HLA loci; addressing the need for deceased donor expedited HLA typing

Human immunology, 2020-08, Vol.81 (8), p.413-422

2020

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miR-155 promotes FLT3-ITD–induced myeloproliferative disease through inhibition of the interferon response

Blood, 2017-06, Vol.129 (23), p.3074-3086

2017

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Ancestry adjustment improves genome-wide estimates of regional intolerance

Genetics (Austin), 2022-05, Vol.221 (2)

2022

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Resolving MiSeq-Generated Ambiguities in HLA-DPB1 Typing by Using the Oxford Nanopore Technology

The Journal of molecular diagnostics : JMD, 2019-09, Vol.21 (5), p.852-861

2019

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Genomic characterization of MICA gene using multiple next generation sequencing platforms: A validation study

HLA, 2020-10, Vol.96 (4), p.430-444

2020

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The Impact of Patterns in Linkage Disequilibrium and Sequencing Quality on the Imprint of Balancing Selection

Genome biology and evolution, 2024-02, Vol.16 (2)

2024

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A comparison of deep sequencing of TCRG rearrangements vs traditional capillary electrophoresis for assessment of clonality in T-Cell lymphoproliferative disorders

American journal of clinical pathology, 2014-03, Vol.141 (3), p.348-359

2014

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Characterization of 108 Genomic DNA Reference Materials for 11 Human Leukocyte Antigen Loci: A GeT-RM Collaborative Project

The Journal of molecular diagnostics : JMD, 2018-09, Vol.20 (5), p.703-715

2018

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Next-generation HLA typing of 382 International Histocompatibility Working Group reference B-lymphoblastoid cell lines: Report from the 17th International HLA and Immunogenetics Workshop

Human immunology, 2019-07, Vol.80 (7), p.449-460

2019

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Reversible LSD1 inhibition with HCI-2509 induces the p53 gene expression signature and disrupts the MYCN signature in high-risk neuroblastoma cells

Oncotarget, 2018-02, Vol.9 (11), p.9907-9924

2018

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Discordant Haplotype Sequencing Identifies Functional Variants at the 2q33 Breast Cancer Risk Locus

Cancer research (Chicago, Ill.), 2016-04, Vol.76 (7), p.1916-1925

2016

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OR41 Novel HLA alleles identified by next generation sequencing using blood-derived DNA of patients with hematologic disease may influence the search process for the appropriate donor in hematopoietic stem cell transplantation

Human immunology, 2019-09, Vol.80, p.46-46

2019

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Transcriptome-wide profiling of multiple RNA modifications simultaneously at single-base resolution

Exosome-delivered microRNAs modulate the inflammatory response to endotoxin

The Lineage-Defining Transcription Factors SOX2 and NKX2-1 Determine Lung Cancer Cell Fate and Shape the Tumor Immune Microenvironment

A Stat1 bound enhancer promotes Nampt expression and function within tumor associated macrophages

Genome-Wide CRISPR-Cas9 Screen Identifies MicroRNAs That Regulate Myeloid Leukemia Cell Growth

FoxA1 and FoxA2 drive gastric differentiation and suppress squamous identity in NKX2-1-negative lung cancer

Active BRAF-V600E is the key player in generation of a sessile serrated polyp-specific DNA methylation profile

MEK Inhibitors Reverse Growth of Embryonal Brain Tumors Derived from Oligoneural Precursor Cells

A combination of HLA-DP α and β chain polymorphisms paired with a SNP in the DPB1 3' UTR region, denoting expression levels, are associated with atopic dermatitis

MYC Drives Progression of Small Cell Lung Cancer to a Variant Neuroendocrine Subtype with Vulnerability to Aurora Kinase Inhibition

Large-Scale Candidate Gene Analysis of Spontaneous Clearance of Hepatitis C Virus

Cytotoxic T-Lymphocyte Antigen 4 Gene and Recovery from Hepatitis B Virus Infection

Utilizing nanopore sequencing technology for the rapid and comprehensive characterization of eleven HLA loci; addressing the need for deceased donor expedited HLA typing

miR-155 promotes FLT3-ITD–induced myeloproliferative disease through inhibition of the interferon response

Ancestry adjustment improves genome-wide estimates of regional intolerance

Genomic characterization of HLA class I and class II genes in ethnically diverse sub‐Saharan African populations: A report on novel HLA alleles

Resolving MiSeq-Generated Ambiguities in HLA-DPB1 Typing by Using the Oxford Nanopore Technology

Genomic characterization of MICA gene using multiple next generation sequencing platforms: A validation study

The Impact of Patterns in Linkage Disequilibrium and Sequencing Quality on the Imprint of Balancing Selection

A comparison of deep sequencing of TCRG rearrangements vs traditional capillary electrophoresis for assessment of clonality in T-Cell lymphoproliferative disorders

Characterization of 108 Genomic DNA Reference Materials for 11 Human Leukocyte Antigen Loci: A GeT-RM Collaborative Project

Next-generation HLA typing of 382 International Histocompatibility Working Group reference B-lymphoblastoid cell lines: Report from the 17th International HLA and Immunogenetics Workshop

Reversible LSD1 inhibition with HCI-2509 induces the p53 gene expression signature and disrupts the MYCN signature in high-risk neuroblastoma cells

Discordant Haplotype Sequencing Identifies Functional Variants at the 2q33 Breast Cancer Risk Locus

OR41 Novel HLA alleles identified by next generation sequencing using blood-derived DNA of patients with hematologic disease may influence the search process for the appropriate donor in hematopoietic stem cell transplantation

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