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Phylogenomic analyses reveal a deep history of hybridization and polyploidy in the Neotropical genus Lachemilla (Rosaceae)

The New phytologist, 2018-06, Vol.218 (4), p.1668-1684

2018

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On the hybrid origin of the C2 Salsola divaricata agg. (Amaranthaceae) from C3 and C4 parental lineages

The New phytologist, 2022-06, Vol.234 (5), p.1876-1890

2022

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Phylogenomics insights into gene evolution, rapid species diversification, and morphological innovation of the apple tribe (Maleae, Rosaceae)

The New phytologist, 2023-12, Vol.240 (5), p.2102-2120

2023

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Extensive allopolyploidy in the neotropical genus Lachemilla (Rosaceae) revealed by PCR‐based target enrichment of the nuclear ribosomal DNA cistron and plastid phylogenomics

American journal of botany, 2019-03, Vol.106 (3), p.415-437

2019

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A phylogenomic perspective on gene tree conflict and character evolution in Caprifoliaceae using target enrichment data, with Zabelioideae recognized as a new subfamily

Journal of systematics and evolution : JSE, 2021-09, Vol.59 (5), p.897-914

2021

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Phylogenomic analyses in Phrymaceae reveal extensive gene tree discordance in relationships among major clades

American journal of botany, 2022-06, Vol.109 (6), p.1035-1046

2022

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Chloroplast primers for clade‐wide phylogenetic studies of Thalictrum

Applications in plant sciences, 2019-10, Vol.7 (10), p.e11294-n/a

2019

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New insights into infrageneric relationships of Lonicera (Caprifoliaceae) as revealed by nuclear ribosomal DNA cistron data and plastid phylogenomics

Journal of systematics and evolution : JSE, 2024-05, Vol.62 (3), p.333-357

2024

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Nuclear and plastid phylogenomic analyses provide insights into the reticulate evolution, species delimitation, and biogeography of the Sino‐Japanese disjunctive Diabelia (Caprifoliaceae)

Journal of systematics and evolution : JSE, 2022-11, Vol.60 (6), p.1331-1343

2022

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Lachemilla jaramilloi and L. talamanquensis spp. nov. (Rosaceae) from Ecuador and Costa Rica

Nordic journal of botany, 2012-12, Vol.30 (6), p.732-736

2012

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Disentangling Sources of Gene Tree Discordance in Phylogenomic Data Sets: Testing Ancient Hybridizations in Amaranthaceae s.l

Systematic biology, 2021-02, Vol.70 (2), p.219-235

2021

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Analysis of Paralogs in Target Enrichment Data Pinpoints Multiple Ancient Polyploidy Events in Alchemilla s.l. (Rosaceae)

Systematic biology, 2021-12, Vol.71 (1), p.190-207

2021

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On the hybrid origin of the C 2 Salsola divaricata agg. (Amaranthaceae) from C 3 and C 4 parental lineages

The New phytologist, 2022-06, Vol.234 (5), p.1876-1890

2022

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Genome sequence and salinity adaptation of the desert shrub Nitraria sibirica (Nitrariaceae, Sapindales)

DNA research, 2023-06, Vol.30 (3)

2023

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Three new species of Lachemilla (Rosaceae) from South America

PhytoKeys, 2019-07, Vol.127 (83), p.93-119

2019

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Phylogenomic Analyses of Alismatales Shed Light into Adaptations to Aquatic Environments

Molecular biology and evolution, 2022-05, Vol.39 (5)

2022

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Fluidigm2PURC: Automated processing and haplotype inference for double‐barcoded PCR amplicons

Applications in plant sciences, 2018-06, Vol.6 (6), p.e01156-n/a

2018

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Target sequence capture data shed light on the deeper evolutionary relationships of subgenus Chamaecerasus in Lonicera (Caprifoliaceae)

Molecular phylogenetics and evolution, 2023-07, Vol.184, p.107808-107808, Article 107808

2023

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Phylogeny and Evolution of the Neotropical Radiation of Lachemilla (Rosaceae): Uncovering a History of Reticulate Evolution and Implications for Infrageneric Classification

Systematic botany, 2018-01, Vol.43 (1), p.17-34

2018

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Phylogenomic analyses of the East Asian endemic Abelia (Caprifoliaceae) shed insights into the temporal and spatial diversification history with widespread hybridization

Annals of botany, 2022-01, Vol.129 (2), p.201-216

2022

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Performance of gene expression analyses using de novo assembled transcripts in polyploid species

Bioinformatics, 2019-11, Vol.35 (21), p.4314-4320

2019

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Biogeographic analysis based on phylogenomic data supports multiple ancient dispersals that facilitated the eastern Asia–North America–Mexico disjunction in the subfamily Linnaeoideae (Caprifoliaceae)

Journal of systematics and evolution : JSE, 2024-09, Vol.62 (5), p.1025-1036

2024

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Lachemilla mexiquense (Rosaceae), a new species from Mexico

PhytoKeys, 2016-03, Vol.62 (62), p.25-32

Morales-Briones, Diego F

2016

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Primers for Castilleja and their Utility Across Orobanchaceae: I. Chloroplast Primers

Applications in plant sciences, 2017-09, Vol.5 (9)

2017

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Primers for Castilleja and their utility across Orobanchaceae: I. Chloroplast primers1

Applications in plant sciences, 2017-09, Vol.5 (9), p.n/a

2017

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Phylogenomic analyses reveal a deep history of hybridization and polyploidy in the Neotropical genus Lachemilla (Rosaceae)

On the hybrid origin of the C2 Salsola divaricata agg. (Amaranthaceae) from C3 and C4 parental lineages

Phylogenomics insights into gene evolution, rapid species diversification, and morphological innovation of the apple tribe (Maleae, Rosaceae)

Extensive allopolyploidy in the neotropical genus Lachemilla (Rosaceae) revealed by PCR‐based target enrichment of the nuclear ribosomal DNA cistron and plastid phylogenomics

A phylogenomic perspective on gene tree conflict and character evolution in Caprifoliaceae using target enrichment data, with Zabelioideae recognized as a new subfamily

Phylogenomic analyses in Phrymaceae reveal extensive gene tree discordance in relationships among major clades

Chloroplast primers for clade‐wide phylogenetic studies of Thalictrum

New insights into infrageneric relationships of Lonicera (Caprifoliaceae) as revealed by nuclear ribosomal DNA cistron data and plastid phylogenomics

Nuclear and plastid phylogenomic analyses provide insights into the reticulate evolution, species delimitation, and biogeography of the Sino‐Japanese disjunctive Diabelia (Caprifoliaceae)

Lachemilla jaramilloi and L. talamanquensis spp. nov. (Rosaceae) from Ecuador and Costa Rica

Disentangling Sources of Gene Tree Discordance in Phylogenomic Data Sets: Testing Ancient Hybridizations in Amaranthaceae s.l

Analysis of Paralogs in Target Enrichment Data Pinpoints Multiple Ancient Polyploidy Events in Alchemilla s.l. (Rosaceae)

On the hybrid origin of the C 2 Salsola divaricata agg. (Amaranthaceae) from C 3 and C 4 parental lineages

Genome sequence and salinity adaptation of the desert shrub Nitraria sibirica (Nitrariaceae, Sapindales)

Three new species of Lachemilla (Rosaceae) from South America

Phylogenomic Analyses of Alismatales Shed Light into Adaptations to Aquatic Environments

Fluidigm2PURC: Automated processing and haplotype inference for double‐barcoded PCR amplicons

Target sequence capture data shed light on the deeper evolutionary relationships of subgenus Chamaecerasus in Lonicera (Caprifoliaceae)

Phylogeny and Evolution of the Neotropical Radiation of Lachemilla (Rosaceae): Uncovering a History of Reticulate Evolution and Implications for Infrageneric Classification

Phylogenomic analyses of the East Asian endemic Abelia (Caprifoliaceae) shed insights into the temporal and spatial diversification history with widespread hybridization

Performance of gene expression analyses using de novo assembled transcripts in polyploid species

Biogeographic analysis based on phylogenomic data supports multiple ancient dispersals that facilitated the eastern Asia–North America–Mexico disjunction in the subfamily Linnaeoideae (Caprifoliaceae)

Lachemilla mexiquense (Rosaceae), a new species from Mexico

Primers for Castilleja and their Utility Across Orobanchaceae: I. Chloroplast Primers

Primers for Castilleja and their utility across Orobanchaceae: I. Chloroplast primers1

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