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Research in Computational Molecular Biology: 20th Annual Conference, RECOMB 2016, Santa Monica, CA, USA, April 17-21, 2016, Proceedings

Singh, Mona

1st ed. 2016, 2016

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SPICi: a fast clustering algorithm for large biological networks

Bioinformatics, 2010-04, Vol.26 (8), p.1105-1111

2010

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Predicting functionally important residues from sequence conservation

Bioinformatics, 2007-08, Vol.23 (15), p.1875-1882

2007

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Comparative genomic analysis reveals varying levels of mammalian adaptation to coronavirus infections

PLoS computational biology, 2021-11, Vol.17 (11), p.e1009560

2021

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molBLOCKS: decomposing small molecule sets and uncovering enriched fragments

Bioinformatics (Oxford, England), 2014-07, Vol.30 (14), p.2081-2083

2014

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Metabolite discovery through global annotation of untargeted metabolomics data

Nature methods, 2021-11, Vol.18 (11), p.1377-1385

2021

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From hub proteins to hub modules: the relationship between essentiality and centrality in the yeast interactome at different scales of organization

PLoS computational biology, 2013-02, Vol.9 (2), p.e1002910-e1002910

2013

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Primate protein-ligand interfaces exhibit significant conservation and unveil human-specific evolutionary drivers

PLoS computational biology, 2023-03, Vol.19 (3), p.e1010966

2023

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Two critical positions in zinc finger domains are heavily mutated in three human cancer types

PLoS computational biology, 2018-06, Vol.14 (6), p.e1006290-e1006290

2018

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RFECS: a random-forest based algorithm for enhancer identification from chromatin state

PLoS computational biology, 2013-03, Vol.9 (3), p.e1002968

2013

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Interaction-based discovery of functionally important genes in cancers

Nucleic acids research, 2014-02, Vol.42 (3), p.e18-e18

2014

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A Biophysical Model of CRISPR/Cas9 Activity for Rational Design of Genome Editing and Gene Regulation

PLoS computational biology, 2016-01, Vol.12 (1), p.e1004724-e1004724

2016

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Allicin enhances antimicrobial activity of macrophages during Mycobacterium tuberculosis infection

Journal of ethnopharmacology, 2019-10, Vol.243, p.111634-111634, Article 111634

2019

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Genome-Wide Detection and Analysis of Multifunctional Genes

PLoS computational biology, 2015-10, Vol.11 (10), p.e1004467-e1004467

2015

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Efficient ReML inference in variance component mixed models using a Min-Max algorithm

PLoS computational biology, 2022-01, Vol.18 (1), p.e1009659

2022

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A comprehensive survey of small-molecule binding pockets in proteins

PLoS computational biology, 2013-10, Vol.9 (10), p.e1003302

2013

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G-quadruplex DNA sequences are evolutionarily conserved and associated with distinct genomic features in Saccharomyces cerevisiae

PLoS computational biology, 2010-07, Vol.6 (7), p.e1000861-e1000861

2010

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Neuronal identities derived by misexpression of the POU IV sensory determinant in a protovertebrate

Proceedings of the National Academy of Sciences - PNAS, 2022-01, Vol.119 (4), p.1

2022

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Predicting protein ligand binding sites by combining evolutionary sequence conservation and 3D structure

PLoS computational biology, 2009-12, Vol.5 (12), p.e1000585

2009

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Differential analysis between somatic mutation and germline variation profiles reveals cancer-related genes

Genome medicine, 2017-08, Vol.9 (1), p.79-79, Article 79

2017

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Characterization and prediction of residues determining protein functional specificity

Bioinformatics, 2008-07, Vol.24 (13), p.1473-1480

2008

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Simple topological features reflect dynamics and modularity in protein interaction networks

PLoS computational biology, 2013-10, Vol.9 (10), p.e1003243-e1003243

2013

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Protein domain-level landscape of cancer-type-specific somatic mutations

PLoS computational biology, 2015-03, Vol.11 (3), p.e1004147-e1004147

2015

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Activation of Kappa Opioid Receptor Regulates the Hypothermic Response to Calorie Restriction and Limits Body Weight Loss

Current biology, 2019-12, Vol.29 (24), p.4291-4299.e4

2019

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Revealing Pathway Dynamics in Heart Diseases by Analyzing Multiple Differential Networks

PLoS computational biology, 2015-06, Vol.11 (6), p.e1004332-e1004332

2015

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Research in Computational Molecular Biology: 20th Annual Conference, RECOMB 2016, Santa Monica, CA, USA, April 17-21, 2016, Proceedings

SPICi: a fast clustering algorithm for large biological networks

Predicting functionally important residues from sequence conservation

Comparative genomic analysis reveals varying levels of mammalian adaptation to coronavirus infections

molBLOCKS: decomposing small molecule sets and uncovering enriched fragments

Metabolite discovery through global annotation of untargeted metabolomics data

From hub proteins to hub modules: the relationship between essentiality and centrality in the yeast interactome at different scales of organization

Primate protein-ligand interfaces exhibit significant conservation and unveil human-specific evolutionary drivers

Two critical positions in zinc finger domains are heavily mutated in three human cancer types

RFECS: a random-forest based algorithm for enhancer identification from chromatin state

Interaction-based discovery of functionally important genes in cancers

A Biophysical Model of CRISPR/Cas9 Activity for Rational Design of Genome Editing and Gene Regulation

Allicin enhances antimicrobial activity of macrophages during Mycobacterium tuberculosis infection

Genome-Wide Detection and Analysis of Multifunctional Genes

Efficient ReML inference in variance component mixed models using a Min-Max algorithm

A comprehensive survey of small-molecule binding pockets in proteins

G-quadruplex DNA sequences are evolutionarily conserved and associated with distinct genomic features in Saccharomyces cerevisiae

Neuronal identities derived by misexpression of the POU IV sensory determinant in a protovertebrate

Predicting protein ligand binding sites by combining evolutionary sequence conservation and 3D structure

Differential analysis between somatic mutation and germline variation profiles reveals cancer-related genes

Characterization and prediction of residues determining protein functional specificity

Simple topological features reflect dynamics and modularity in protein interaction networks

Protein domain-level landscape of cancer-type-specific somatic mutations

Activation of Kappa Opioid Receptor Regulates the Hypothermic Response to Calorie Restriction and Limits Body Weight Loss

Revealing Pathway Dynamics in Heart Diseases by Analyzing Multiple Differential Networks

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