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SCODE: an efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation

Bioinformatics (Oxford, England), 2017-08, Vol.33 (15), p.2314-2321

2017

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Functional heterogeneity of embryonic stem cells revealed through translational amplification of an early endodermal transcript

PLoS biology, 2010-05, Vol.8 (5), p.e1000379-e1000379

2010

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Pluripotency governed by Sox2 via regulation of Oct3/4 expression in mouse embryonic stem cells

Nature cell biology, 2007-06, Vol.9 (6), p.625-635

2007

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Mouse B-Type Lamins Are Required for Proper Organogenesis But Not by Embryonic Stem Cells

Science (American Association for the Advancement of Science), 2011-12, Vol.334 (6063), p.1706-1710

2011

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Zscan4 regulates telomere elongation and genomic stability in ES cells

Nature (London), 2010-04, Vol.464 (7290), p.858-863

2010

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Prenatal arsenic exposure alters gene expression in the adult liver to a proinflammatory state contributing to accelerated atherosclerosis

PloS one, 2012-06, Vol.7 (6), p.e38713

2012

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AGEMAP: a gene expression database for aging in mice

PLoS genetics, 2007-11, Vol.3 (11), p.e201-e201

2007

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Loss of Imprinting of Igf2 Alters Intestinal Maturation and Tumorigenesis in Mice

Science (American Association for the Advancement of Science), 2005-03, Vol.307 (5717), p.1976-1978

2005

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Database for mRNA Half-Life of 19 977 Genes Obtained by DNA Microarray Analysis of Pluripotent and Differentiating Mouse Embryonic Stem Cells

DNA research, 2009-02, Vol.16 (1), p.45-58

2009

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Functional and long-lived melanocytes from human pluripotent stem cells with transient ectopic expression of JMJD3

Stem cell research & therapy, 2023-09, Vol.14 (1), p.1-242, Article 242

2023

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Klf4 Cooperates with Oct3/4 and Sox2 To Activate the Lefty1 Core Promoter in Embryonic Stem Cells

Molecular and Cellular Biology, 2006-10, Vol.26 (20), p.7772-7782

2006

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Induction of human pluripotent stem cells into kidney tissues by synthetic mRNAs encoding transcription factors

Scientific reports, 2019-01, Vol.9 (1), p.913-913, Article 913

2019

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Dissecting Oct3/4-regulated gene networks in embryonic stem cells by expression profiling

PloS one, 2006-12, Vol.1 (1), p.e26-e26

2006

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BAF250B‐Associated SWI/SNF Chromatin‐Remodeling Complex Is Required to Maintain Undifferentiated Mouse Embryonic Stem Cells

Stem cells (Dayton, Ohio), 2008-05, Vol.26 (5), p.1155-1165

2008

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Efficient differentiation of human pluripotent stem cells into skeletal muscle cells by combining RNA-based MYOD1-expression and POU5F1-silencing

Scientific reports, 2018-01, Vol.8 (1), p.1189-13, Article 1189

2018

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ExAtlas: An interactive online tool for meta-analysis of gene expression data

Journal of bioinformatics and computational biology, 2015-12, Vol.13 (6), p.1550019

2015

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Exhaustive Search for Over-represented DNA Sequence Motifs with CisFinder

DNA research, 2009-10, Vol.16 (5), p.261-273

2009

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Transient ectopic expression of the histone demethylase JMJD3 accelerates the differentiation of human pluripotent stem cells

Development (Cambridge), 2016-10, Vol.143 (20), p.3674-3685

2016

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A web-based tool for principal component and significance analysis of microarray data

Bioinformatics, 2005-05, Vol.21 (10), p.2548-2549

2005

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Essential role of chromatin remodeling protein Bptf in early mouse embryos and embryonic stem cells

PLoS genetics, 2008-10, Vol.4 (10), p.e1000241-e1000241

2008

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Identification of Pou5f1, Sox2, and Nanog downstream target genes with statistical confidence by applying a novel algorithm to time course microarray and genome-wide chromatin immunoprecipitation data

BMC genomics, 2008-06, Vol.9 (1), p.269-269, Article 269

2008

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Developmental Arrest and Mouse Antral Not-Surrounded Nucleolus Oocytes

Biology of reproduction, 2013, Vol.88 (1), p.2-2

2013

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Transient bursts of Zscan4 expression are accompanied by the rapid derepression of heterochromatin in mouse embryonic stem cells

DNA research, 2015-10, Vol.22 (5), p.307-318

2015

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A genetically engineered ovarian cancer mouse model based on fallopian tube transformation mimics human high-grade serous carcinoma development

The Journal of pathology, 2014-07, Vol.233 (3), p.228-237

2014

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SCODE: an efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation

Functional heterogeneity of embryonic stem cells revealed through translational amplification of an early endodermal transcript

Pluripotency governed by Sox2 via regulation of Oct3/4 expression in mouse embryonic stem cells

Mouse B-Type Lamins Are Required for Proper Organogenesis But Not by Embryonic Stem Cells

Zscan4 regulates telomere elongation and genomic stability in ES cells

Prenatal arsenic exposure alters gene expression in the adult liver to a proinflammatory state contributing to accelerated atherosclerosis

AGEMAP: a gene expression database for aging in mice

Loss of Imprinting of Igf2 Alters Intestinal Maturation and Tumorigenesis in Mice

Database for mRNA Half-Life of 19 977 Genes Obtained by DNA Microarray Analysis of Pluripotent and Differentiating Mouse Embryonic Stem Cells

Functional and long-lived melanocytes from human pluripotent stem cells with transient ectopic expression of JMJD3

Klf4 Cooperates with Oct3/4 and Sox2 To Activate the Lefty1 Core Promoter in Embryonic Stem Cells

Induction of human pluripotent stem cells into kidney tissues by synthetic mRNAs encoding transcription factors

Dissecting Oct3/4-regulated gene networks in embryonic stem cells by expression profiling

BAF250B‐Associated SWI/SNF Chromatin‐Remodeling Complex Is Required to Maintain Undifferentiated Mouse Embryonic Stem Cells

Efficient differentiation of human pluripotent stem cells into skeletal muscle cells by combining RNA-based MYOD1-expression and POU5F1-silencing

ExAtlas: An interactive online tool for meta-analysis of gene expression data

Uncovering Early Response of Gene Regulatory Networks in ESCs by Systematic Induction of Transcription Factors

Exhaustive Search for Over-represented DNA Sequence Motifs with CisFinder

Transient ectopic expression of the histone demethylase JMJD3 accelerates the differentiation of human pluripotent stem cells

A web-based tool for principal component and significance analysis of microarray data

Essential role of chromatin remodeling protein Bptf in early mouse embryos and embryonic stem cells

Identification of Pou5f1, Sox2, and Nanog downstream target genes with statistical confidence by applying a novel algorithm to time course microarray and genome-wide chromatin immunoprecipitation data

Developmental Arrest and Mouse Antral Not-Surrounded Nucleolus Oocytes

Transient bursts of Zscan4 expression are accompanied by the rapid derepression of heterochromatin in mouse embryonic stem cells

A genetically engineered ovarian cancer mouse model based on fallopian tube transformation mimics human high-grade serous carcinoma development

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