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Maximum allowed solvent accessibilites of residues in proteins

PloS one, 2013-11, Vol.8 (11), p.e80635-e80635

2013

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Systematic humanization of yeast genes reveals conserved functions and genetic modularity

Science (American Association for the Advancement of Science), 2015-05, Vol.348 (6237), p.921-925

2015

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Functional Sites Induce Long-Range Evolutionary Constraints in Enzymes

PLoS biology, 2016-05, Vol.14 (5), p.e1002452

2016

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Identifying structural variation in haploid microbial genomes from short-read resequencing data using breseq

BMC genomics, 2014-11, Vol.15 (1), p.1039-1039

2014

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Geometric Constraints Dominate the Antigenic Evolution of Influenza H3N2 Hemagglutinin

PLoS pathogens, 2015-05, Vol.11 (5), p.e1004940

2015

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Alternate Splicing of Dysferlin C2A Confers Ca2+-Dependent and Ca2+-Independent Binding for Membrane Repair

Structure (London), 2014-01, Vol.22 (1), p.104-115

2014

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Predicting growth conditions from internal metabolic fluxes in an in-silico model of E. coli

PloS one, 2014-12, Vol.9 (12), p.e114608-e114608

2014

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Modeling coding-sequence evolution within the context of residue solvent accessibility

BMC evolutionary biology, 2012-09, Vol.12 (1), p.179, Article 179

2012

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Lower Activation in Frontal Cortex and Posterior Cingulate Cortex Observed during Sex Determination Test in Early-Stage Dementia of the Alzheimer Type

Frontiers in aging neuroscience, 2017-05, Vol.9, p.156-156

2017

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Integrating sequence variation and protein structure to identify sites under selection

Molecular biology and evolution, 2013-01, Vol.30 (1), p.36-44

2013

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Analyzing machupo virus-receptor binding by molecular dynamics simulations

PeerJ (San Francisco, CA), 2014-02, Vol.2, p.e266

2014

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Predicting Evolutionary Site Variability from Structure in Viral Proteins: Buriedness, Packing, Flexibility, and Design

Journal of molecular evolution, 2014-10, Vol.79 (3-4), p.130-142

2014

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The utility of protein structure as a predictor of site-wise dN/dS varies widely among HIV-1 proteins

Journal of the Royal Society interface, 2015-10, Vol.12 (111), p.20150579

2015

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Cross-species comparison of site-specific evolutionary-rate variation in influenza haemagglutinin

Philosophical transactions of the Royal Society of London. Series B. Biological sciences, 2013-03, Vol.368 (1614), p.20120334

2013

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Sequence amplification via cell passaging creates spurious signals of positive adaptation in influenza virus H3N2 hemagglutinin

Virus evolution, 2016-07, Vol.2 (2), p.vew026

2016

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Computational and Functional Analysis of the Virus-Receptor Interface Reveals Host Range Trade-Offs in New World Arenaviruses

Journal of virology, 2015-11, Vol.89 (22), p.11643-11653

2015

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Time dependence of evolutionary metrics during the 2009 pandemic influenza virus outbreak

Virus evolution, 2015-08, Vol.1 (1), p.vev006

2015

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White Matter Deterioration May Foreshadow Impairment of Emotional Valence Determination in Early-Stage Dementia of the Alzheimer Type

Frontiers in aging neuroscience, 2017-03, Vol.9, p.37-37

2017

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Geometric Constraints Dominate the Antigenic Evolution of Influenza H3N2 Hemagglutinin: e1004940

PLoS pathogens, 2015-05, Vol.11 (5)

2015

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The utility of protein structure as a predictor of site-wise d N /d S varies widely among HIV-1 proteins

Journal of the Royal Society interface, 2015-10, Vol.12 (111), p.20150579

2015

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Evolution. Systematic humanization of yeast genes reveals conserved functions and genetic modularity

Science (American Association for the Advancement of Science), 2015-05, Vol.348 (6237), p.921

2015

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Predicting Growth Conditions from Internal Metabolic Fluxes in an In-Silico Model of E. coli: e114608

PloS one, 2014-12, Vol.9 (12)

2014

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Mismatch repair deficiency predicts response of solid tumors to PD-1 blockade

Science (American Association for the Advancement of Science), 2017-07, Vol.357 (6349), p.409-413

2017

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Poly(ADP-ribose) Metabolism Is Essential for Proper Nucleoprotein Exchange During Mouse Spermiogenesis

Biology of reproduction, 2011-02, Vol.84 (2), p.218-228

2011

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Antimicrobial Prophylaxis for Children with Vesicoureteral Reflux

The New England journal of medicine, 2014-06, Vol.370 (25), p.2367-2376

2014

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Maximum allowed solvent accessibilites of residues in proteins

Systematic humanization of yeast genes reveals conserved functions and genetic modularity

Functional Sites Induce Long-Range Evolutionary Constraints in Enzymes

Identifying structural variation in haploid microbial genomes from short-read resequencing data using breseq

Geometric Constraints Dominate the Antigenic Evolution of Influenza H3N2 Hemagglutinin

Alternate Splicing of Dysferlin C2A Confers Ca2+-Dependent and Ca2+-Independent Binding for Membrane Repair

Predicting growth conditions from internal metabolic fluxes in an in-silico model of E. coli

Modeling coding-sequence evolution within the context of residue solvent accessibility

Lower Activation in Frontal Cortex and Posterior Cingulate Cortex Observed during Sex Determination Test in Early-Stage Dementia of the Alzheimer Type

Integrating sequence variation and protein structure to identify sites under selection

Analyzing machupo virus-receptor binding by molecular dynamics simulations

Predicting Evolutionary Site Variability from Structure in Viral Proteins: Buriedness, Packing, Flexibility, and Design

The utility of protein structure as a predictor of site-wise dN/dS varies widely among HIV-1 proteins

Cross-species comparison of site-specific evolutionary-rate variation in influenza haemagglutinin

Sequence amplification via cell passaging creates spurious signals of positive adaptation in influenza virus H3N2 hemagglutinin

Computational and Functional Analysis of the Virus-Receptor Interface Reveals Host Range Trade-Offs in New World Arenaviruses

Time dependence of evolutionary metrics during the 2009 pandemic influenza virus outbreak

White Matter Deterioration May Foreshadow Impairment of Emotional Valence Determination in Early-Stage Dementia of the Alzheimer Type

Geometric Constraints Dominate the Antigenic Evolution of Influenza H3N2 Hemagglutinin: e1004940

The utility of protein structure as a predictor of site-wise d N /d S varies widely among HIV-1 proteins

Evolution. Systematic humanization of yeast genes reveals conserved functions and genetic modularity

Predicting Growth Conditions from Internal Metabolic Fluxes in an In-Silico Model of E. coli: e114608

Mismatch repair deficiency predicts response of solid tumors to PD-1 blockade

Poly(ADP-ribose) Metabolism Is Essential for Proper Nucleoprotein Exchange During Mouse Spermiogenesis

Antimicrobial Prophylaxis for Children with Vesicoureteral Reflux

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