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Asymmetric Conservation within Pairs of Co-Occurred Motifs Mediates Weak Direct Binding of Transcription Factors in ChIP-Seq Data

International journal of molecular sciences, 2020-08, Vol.21 (17), p.6023

2020

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Detection of regulatory SNPs in human genome using ChIP-seq ENCODE data

PloS one, 2013-10, Vol.8 (10), p.e78833-e78833

2013

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Novel approach to functional SNPs discovery from genome‐wide data reveals promising variants for colon cancer risk

Human mutation, 2018-06, Vol.39 (6), p.851-859

2018

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Application of experimentally verified transcription factor binding sites models for computational analysis of ChIP-Seq data

BMC genomics, 2014-01, Vol.15 (1), p.80-80

2014

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Hypertension Accelerates the Progression of Alzheimer-Like Pathology in a Mouse Model of the Disease

Hypertension (Dallas, Tex. 1979), 2015-01, Vol.65 (1), p.218-224

2015

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Netrin-4 inhibits angiogenesis via binding to neogenin and recruitment of Unc5B

Proceedings of the National Academy of Sciences - PNAS, 2008-08, Vol.105 (34), p.12491-12496

2008

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Seismic activity of major hidden faults in the Priamurye region

E3S Web of Conferences, 2020, Vol.192, p.4010

2020

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Effective transcription factor binding site prediction using a combination of optimization, a genetic algorithm and discriminant analysis to capture distant interactions

BMC bioinformatics, 2007-12, Vol.8 (1), p.481-481, Article 481

2007

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Neuropilin-1 and neuropilin-2 act as coreceptors, potentiating proangiogenic activity

Blood, 2008-02, Vol.111 (4), p.2036-2045

2008

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Structural variants of glucocorticoid receptor binding sites and different versions of positive glucocorticoid responsive elements: Analysis of GR-TRRD database

The Journal of steroid biochemistry and molecular biology, 2009-05, Vol.115 (1), p.1-8

2009

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Identification of thyroid hormone receptor homologs in the fluke Opisthorchis felineus (Platyhelminthes)

Molecular and biochemical parasitology, 2014-03, Vol.194 (1-2), p.64-68

2014

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Possible link between the synthesis of GR alpha isoforms and eIF2 alpha phosphorylation state

Medical hypotheses, 2012-12, Vol.79 (6), p.709-712

2012

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Small Interfering RNAs Induce Target-Independent Inhibition of Tumor Growth and Vasculature Remodeling in a Mouse Model of Hepatocellular Carcinoma

The American journal of pathology, 2010-12, Vol.177 (6), p.3192-3201

2010

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HGF receptor up-regulation contributes to the angiogenic phenotype of human endothelial cells and promotes angiogenesis in vitro

Blood, 2003-06, Vol.101 (12), p.4816-4822

2003

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Cross-talk between the VEGF-A and HGF signalling pathways in endothelial cells

Biology of the cell, 2009-09, Vol.101 (9), p.525-539

2009

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Diabetic Ephrin-B2-Stimulated Peripheral Blood Mononuclear Cells Enhance Poststroke Recovery in Mice

Stem cells international, 2018-01, Vol.2018 (2018), p.1-17

2018

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Ortho-aminoazotoluene activates mouse constitutive androstane receptor (mCAR) and increases expression of mCAR target genes

Toxicology and applied pharmacology, 2011-08, Vol.255 (1), p.76-85

2011

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A single ChIP-seq dataset is sufficient for comprehensive analysis of motifs co-occurrence with MCOT package

Nucleic acids research, 2019-12, Vol.47 (21), p.e139-e139

2019

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Stress Transfer and the Impact of the India-Eurasia Collision and the Western Pacific Subduction on the Geodynamics of the Asian Continent

Open journal of earthquake research, 2022, Vol.11 (4), p.73-88

2022

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Combined experimental and computational approaches to study the regulatory elements in eukaryotic genes

Briefings in bioinformatics, 2007-07, Vol.8 (4), p.266-274

2007

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Translation termination in eukaryotes: Polypeptide release factor eRF1 is composed of functionally and structurally distinct domains

RNA (Cambridge), 2000-03, Vol.6 (3), p.381-390, Article S135583820099143X

2000

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Effects of o -aminoazotoluene on liver regeneration and p53 activation in mice susceptible and resistant to hepatocarcinogenesis

Toxicology (Amsterdam), 2008-12, Vol.254 (1), p.91-96

2008

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rSNP_Guide: An integrated database‐tools system for studying SNPs and site‐directed mutations in transcription factor binding sites

Human mutation, 2002-10, Vol.20 (4), p.239-248

2002

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Species-specific effects of the hepatocarcinogens 3′-methyl-4-dimethyl-aminoazobenzene and ortho-aminoazotoluene in mouse and rat liver

Molecular carcinogenesis, 2005-12, Vol.44 (4), p.223-232

2005

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Biochemical characterization of the mouse muscle-specific enolase: developmental changes in electrophoretic variants and selective binding to other proteins

Biochemical journal, 1997-05, Vol.323 ( Pt 3) (3), p.791-800

1997

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Asymmetric Conservation within Pairs of Co-Occurred Motifs Mediates Weak Direct Binding of Transcription Factors in ChIP-Seq Data

Detection of regulatory SNPs in human genome using ChIP-seq ENCODE data

Novel approach to functional SNPs discovery from genome‐wide data reveals promising variants for colon cancer risk

Application of experimentally verified transcription factor binding sites models for computational analysis of ChIP-Seq data

Hypertension Accelerates the Progression of Alzheimer-Like Pathology in a Mouse Model of the Disease

Netrin-4 inhibits angiogenesis via binding to neogenin and recruitment of Unc5B

Seismic activity of major hidden faults in the Priamurye region

Effective transcription factor binding site prediction using a combination of optimization, a genetic algorithm and discriminant analysis to capture distant interactions

Neuropilin-1 and neuropilin-2 act as coreceptors, potentiating proangiogenic activity

Structural variants of glucocorticoid receptor binding sites and different versions of positive glucocorticoid responsive elements: Analysis of GR-TRRD database

Identification of thyroid hormone receptor homologs in the fluke Opisthorchis felineus (Platyhelminthes)

Possible link between the synthesis of GR alpha isoforms and eIF2 alpha phosphorylation state

Small Interfering RNAs Induce Target-Independent Inhibition of Tumor Growth and Vasculature Remodeling in a Mouse Model of Hepatocellular Carcinoma

HGF receptor up-regulation contributes to the angiogenic phenotype of human endothelial cells and promotes angiogenesis in vitro

Cross-talk between the VEGF-A and HGF signalling pathways in endothelial cells

Diabetic Ephrin-B2-Stimulated Peripheral Blood Mononuclear Cells Enhance Poststroke Recovery in Mice

Ortho-aminoazotoluene activates mouse constitutive androstane receptor (mCAR) and increases expression of mCAR target genes

A single ChIP-seq dataset is sufficient for comprehensive analysis of motifs co-occurrence with MCOT package

Stress Transfer and the Impact of the India-Eurasia Collision and the Western Pacific Subduction on the Geodynamics of the Asian Continent

Combined experimental and computational approaches to study the regulatory elements in eukaryotic genes

Translation termination in eukaryotes: Polypeptide release factor eRF1 is composed of functionally and structurally distinct domains

Effects of o -aminoazotoluene on liver regeneration and p53 activation in mice susceptible and resistant to hepatocarcinogenesis

rSNP_Guide: An integrated database‐tools system for studying SNPs and site‐directed mutations in transcription factor binding sites

Species-specific effects of the hepatocarcinogens 3′-methyl-4-dimethyl-aminoazobenzene and ortho-aminoazotoluene in mouse and rat liver

Biochemical characterization of the mouse muscle-specific enolase: developmental changes in electrophoretic variants and selective binding to other proteins

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