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Paralogs are revealed by proportion of heterozygotes and deviations in read ratios in genotyping‐by‐sequencing data from natural populations

Molecular ecology resources, 2017-07, Vol.17 (4), p.656-669

2017

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RADseq provides unprecedented insights into molecular ecology and evolutionary genetics: comment on Breaking RAD by Lowry et al. (2016)

Molecular ecology resources, 2017-05, Vol.17 (3), p.356-361

2017

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Retention of a chromosomal inversion from an anadromous ancestor provides the genetic basis for alternative freshwater ecotypes in rainbow trout

Molecular ecology, 2019-03, Vol.28 (6), p.1412-1427

2019

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A mobile sex‐determining region, male‐specific haplotypes and rearing environment influence age at maturity in Chinook salmon

Molecular ecology, 2021-01, Vol.30 (1), p.131-147

2021

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Evidence of sex-bias in gene expression in the brain transcriptome of two populations of rainbow trout (Oncorhynchus mykiss) with divergent life histories

PloS one, 2018-02, Vol.13 (2), p.e0193009-e0193009

2018

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Genomic islands of divergence linked to ecotypic variation in sockeye salmon

Molecular ecology, 2017-01, Vol.26 (2), p.554-570

2017

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Gene flow influences the genomic architecture of local adaptation in six riverine fish species

Molecular ecology, 2023-04, Vol.32 (7), p.1549-1566

2023

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Genomic divergence of hatchery- and natural-origin Chinook salmon (Oncorhynchus tshawytscha) in two supplemented populations

Conservation genetics, 2023-04, Vol.24 (2), p.167-179

2023

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A GT‐seq panel for walleye (Sander vitreus) provides important insights for efficient development and implementation of amplicon panels in non‐model organisms

Molecular ecology resources, 2020-11, Vol.20 (6), p.1706-1722

2020

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A candidate chromosome inversion in Arctic charr ( Salvelinus alpinus ) identified by population genetic analysis techniques

G3 : genes - genomes - genetics, 2021-10, Vol.11 (10)

2021

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Attack of the PCR clones: Rates of clonality have little effect on RAD‐seq genotype calls

Molecular ecology resources, 2020-01, Vol.20 (1), p.66-78

2020

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Power of a dual‐use SNP panel for pedigree reconstruction and population assignment

Ecology and evolution, 2020-09, Vol.10 (17), p.9522-9531

2020

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Genetic and morphological divergence in three strains of brook trout Salvelinus fontinalis commonly stocked in Lake Superior

PloS one, 2014-12, Vol.9 (12), p.e113809-e113809

2014

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Y‐chromosome haplotypes are associated with variation in size and age at maturity in male Chinook salmon

Evolutionary applications, 2020-12, Vol.13 (10), p.2791-2806

2020

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Ontogenetic changes in embryonic and brain gene expression in progeny produced from migratory and resident Oncorhynchus mykiss

Molecular ecology, 2015-04, Vol.24 (8), p.1792-1809

2015

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“Chromosomes and genes, spawned these fateful scenes”: Rapid adaptation in an introduced fish

Molecular ecology, 2018-10, Vol.27 (20), p.3965-3967

2018

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Should I stay or should I go?

Science (American Association for the Advancement of Science), 2020-10, Vol.370 (6516), p.526-527

McKinney, Garrett

2020

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Recombination patterns reveal information about centromere location on linkage maps

Molecular ecology resources, 2016-05, Vol.16 (3), p.655-661

2016

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Parallel signatures of selection at genomic islands of divergence and the major histocompatibility complex in ecotypes of sockeye salmon across Alaska

Molecular ecology, 2019-05, Vol.28 (9), p.2254-2271

2019

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In silico prediction and in vivo validation of Daphnia pulex microRNAs

PloS one, 2014-01, Vol.9 (1), p.e83708-e83708

2014

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Identification of Multiple QTL Hotspots in Sockeye Salmon (Oncorhynchus nerka) Using Genotyping-by-Sequencing and a Dense Linkage Map

The Journal of heredity, 2016-03, Vol.107 (2), p.122-133

2016

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Long-Term Conservation of Ohnologs Through Partial Tetrasomy Following Whole-Genome Duplication in Salmonidae

G3 : genes - genomes - genetics, 2019-06, Vol.9 (6), p.2017-2028

2019

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The Impacts of Dam Construction and Removal on the Genetics of Recovering Steelhead ( Oncorhynchus mykiss ) Populations across the Elwha River Watershed

Genes, 2021-01, Vol.12 (1), p.89

2021

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Resolving allele dosage in duplicated loci using genotyping‐by‐sequencing data: A path forward for population genetic analysis

Molecular ecology resources, 2018-05, Vol.18 (3), p.570-579

2018

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Comparative Genomic Analyses and a Novel Linkage Map for Cisco ( Coregonus artedi) Provide Insights into Chromosomal Evolution and Rediploidization Across Salmonids

G3 : genes - genomes - genetics, 2020-08, Vol.10 (8), p.2863-2878

2020

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Paralogs are revealed by proportion of heterozygotes and deviations in read ratios in genotyping‐by‐sequencing data from natural populations

RADseq provides unprecedented insights into molecular ecology and evolutionary genetics: comment on Breaking RAD by Lowry et al. (2016)

Retention of a chromosomal inversion from an anadromous ancestor provides the genetic basis for alternative freshwater ecotypes in rainbow trout

A mobile sex‐determining region, male‐specific haplotypes and rearing environment influence age at maturity in Chinook salmon

Evidence of sex-bias in gene expression in the brain transcriptome of two populations of rainbow trout (Oncorhynchus mykiss) with divergent life histories

Genomic islands of divergence linked to ecotypic variation in sockeye salmon

Gene flow influences the genomic architecture of local adaptation in six riverine fish species

Genomic divergence of hatchery- and natural-origin Chinook salmon (Oncorhynchus tshawytscha) in two supplemented populations

A GT‐seq panel for walleye (Sander vitreus) provides important insights for efficient development and implementation of amplicon panels in non‐model organisms

A candidate chromosome inversion in Arctic charr ( Salvelinus alpinus ) identified by population genetic analysis techniques

Attack of the PCR clones: Rates of clonality have little effect on RAD‐seq genotype calls

Power of a dual‐use SNP panel for pedigree reconstruction and population assignment

Genetic and morphological divergence in three strains of brook trout Salvelinus fontinalis commonly stocked in Lake Superior

Y‐chromosome haplotypes are associated with variation in size and age at maturity in male Chinook salmon

Ontogenetic changes in embryonic and brain gene expression in progeny produced from migratory and resident Oncorhynchus mykiss

“Chromosomes and genes, spawned these fateful scenes”: Rapid adaptation in an introduced fish

Should I stay or should I go?

Recombination patterns reveal information about centromere location on linkage maps

Parallel signatures of selection at genomic islands of divergence and the major histocompatibility complex in ecotypes of sockeye salmon across Alaska

In silico prediction and in vivo validation of Daphnia pulex microRNAs

Identification of Multiple QTL Hotspots in Sockeye Salmon (Oncorhynchus nerka) Using Genotyping-by-Sequencing and a Dense Linkage Map

Long-Term Conservation of Ohnologs Through Partial Tetrasomy Following Whole-Genome Duplication in Salmonidae

The Impacts of Dam Construction and Removal on the Genetics of Recovering Steelhead ( Oncorhynchus mykiss ) Populations across the Elwha River Watershed

Resolving allele dosage in duplicated loci using genotyping‐by‐sequencing data: A path forward for population genetic analysis

Comparative Genomic Analyses and a Novel Linkage Map for Cisco ( Coregonus artedi) Provide Insights into Chromosomal Evolution and Rediploidization Across Salmonids

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