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Recent Advances in Understanding σ70-Dependent Transcription Initiation Mechanisms

Journal of molecular biology, 2019-09, Vol.431 (20), p.3947-3959

2019

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Isolation and characterization of two virulent Aeromonads associated with haemorrhagic septicaemia and tail-rot disease in farmed climbing perch Anabas testudineus

Scientific reports, 2021-03, Vol.11 (1), p.5826-10, Article 5826

2021

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Transcription initiation at a consensus bacterial promoter proceeds via a 'bind-unwind-load-and-lock' mechanism

eLife, 2021-10, Vol.10

2021

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Genome-wide association studies using 50 K rice genic SNP chip unveil genetic architecture for anaerobic germination of deep-water rice population of Assam, India

Molecular genetics and genomics : MGG, 2020-09, Vol.295 (5), p.1211-1226

2020

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Genome-wide identification and development of miniature inverted-repeat transposable elements and intron length polymorphic markers in tea plant (Camellia sinensis)

Scientific reports, 2022-09, Vol.12 (1), p.16233-16233, Article 16233

2022

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The RNA polymerase clamp interconverts dynamically among three states and is stabilized in a partly closed state by ppGpp

Nucleic acids research, 2018-08, Vol.46 (14), p.7284-7295

2018

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Structural Basis of Transcription Inhibition by Fidaxomicin (Lipiarmycin A3)

Molecular cell, 2018-04, Vol.70 (1), p.60-71.e15

2018

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Identification and mapping of quantitative trait loci (QTL) and epistatic QTL for salinity tolerance at seedling stage in traditional aromatic short grain rice landrace Kolajoha (Oryza sativa L.) of Assam, India

Euphytica, 2020-05, Vol.216 (5), Article 75

2020

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Macromolecular crowding has opposite effects on two critical sub‐steps of transcription initiation

FEBS letters, 2024-05, Vol.598 (9), p.1022-1033

2024

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Monitoring Structural Transitions in RNA Polymerase using Single Molecule FRET

Biophysical journal, 2019-02, Vol.116 (3), p.298a-298a

Mazumder, Abhishek

2019

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Spatial and Temporal Dynamics of Fish Species Assemblage and Distribution in the Kameng River, Northeast India

National Academy of Sciences, India. Proceedings. Section B. Biological Sciences, 2021-03, Vol.91 (1), p.123-130

2021

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Cover Feature: Bleaching‐resistant, Near‐continuous Single‐molecule Fluorescence and FRET Based on Fluorogenic and Transient DNA Binding (ChemPhysChem 12/2023)

Chemphyschem, 2023-06, Vol.24 (12), p.n/a

2023

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Single-Molecule Fret Analysis of Key Protein Conformational Changes During Promoter Escape by RNA Polymerase

Biophysical journal, 2021-02, Vol.120 (3), p.109a-109a

2021

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Understanding natural genetic variation for nutritional quality in grain and identification of superior haplotypes in deepwater rice genotypes of Assam, India

Gene, 2024-11, Vol.928, p.148801, Article 148801

2024

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Closing and opening of the RNA polymerase trigger loop

Proceedings of the National Academy of Sciences - PNAS, 2020-07, Vol.117 (27), p.15642-15649

2020

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Bleaching‐resistant, Near‐continuous Single‐molecule Fluorescence and FRET Based on Fluorogenic and Transient DNA Binding

Chemphyschem, 2023-06, Vol.24 (12), p.e202300175-n/a

2023

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Single-molecule Analysis Reveals the Mechanism for DNA Opening in Transcription Initiation

Biophysical journal, 2020-02, Vol.118 (3), p.29a-29a

2020

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Psilorhynchus nahlongthai, a new fish species (Teleostei: Psilorhynchidae) from the Brahmaputra drainage, northeast India

Journal of fish biology, 2020-03, Vol.96 (3), p.642-650

2020

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Transcriptional dynamics of Zn-accumulation in developing kernels of maize reveals important Zn-uptake mechanisms

Genomics (San Diego, Calif.), 2020-09, Vol.112 (5), p.3435-3447

2020

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Nanopore-tweezers analysis of translocation by Escherichia coli RNA polymerase and yeast RNA polymerase II

Biophysical journal, 2024-02, Vol.123 (3), p.167a-167a

2024

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RNA polymerase clamp conformational dynamics: long-lived states and modulation by crowding, cations, and nonspecific DNA binding

Nucleic acids research, 2021-03, Vol.49 (5), p.2790-2802

2021

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Fractional‐nucleotide translocation in sequence‐dependent pausing by RNA polymerase: Single‐molecule picometer‐resolution nanopore tweezers (SPRNT)

The FASEB journal, 2019-04, Vol.33 (S1), p.221.1-221.1

2019

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A peptide-based synthetic transcription factor selectively activates transcription in a mammalian cell

Chemical communications (Cambridge, England), 2018, Vol.54 (13), p.1611-1614

2018

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Confinement-Free Wide-Field Ratiometric Tracking of Single Fluorescent Molecules

Biophysical journal, 2019-12, Vol.117 (11), p.2141-2153

2019

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Nanopore tweezers show fractional-nucleotide translocation in sequence-dependent pausing by RNA polymerase

Proceedings of the National Academy of Sciences - PNAS, 2024-07, Vol.121 (29), p.e2321017121

2024

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Recent Advances in Understanding σ70-Dependent Transcription Initiation Mechanisms

Isolation and characterization of two virulent Aeromonads associated with haemorrhagic septicaemia and tail-rot disease in farmed climbing perch Anabas testudineus

Transcription initiation at a consensus bacterial promoter proceeds via a 'bind-unwind-load-and-lock' mechanism

Genome-wide association studies using 50 K rice genic SNP chip unveil genetic architecture for anaerobic germination of deep-water rice population of Assam, India

Genome-wide identification and development of miniature inverted-repeat transposable elements and intron length polymorphic markers in tea plant (Camellia sinensis)

The RNA polymerase clamp interconverts dynamically among three states and is stabilized in a partly closed state by ppGpp

Structural Basis of Transcription Inhibition by Fidaxomicin (Lipiarmycin A3)

Identification and mapping of quantitative trait loci (QTL) and epistatic QTL for salinity tolerance at seedling stage in traditional aromatic short grain rice landrace Kolajoha (Oryza sativa L.) of Assam, India

Macromolecular crowding has opposite effects on two critical sub‐steps of transcription initiation

Monitoring Structural Transitions in RNA Polymerase using Single Molecule FRET

Spatial and Temporal Dynamics of Fish Species Assemblage and Distribution in the Kameng River, Northeast India

Cover Feature: Bleaching‐resistant, Near‐continuous Single‐molecule Fluorescence and FRET Based on Fluorogenic and Transient DNA Binding (ChemPhysChem 12/2023)

Single-Molecule Fret Analysis of Key Protein Conformational Changes During Promoter Escape by RNA Polymerase

Understanding natural genetic variation for nutritional quality in grain and identification of superior haplotypes in deepwater rice genotypes of Assam, India

Closing and opening of the RNA polymerase trigger loop

Bleaching‐resistant, Near‐continuous Single‐molecule Fluorescence and FRET Based on Fluorogenic and Transient DNA Binding

Single-molecule Analysis Reveals the Mechanism for DNA Opening in Transcription Initiation

Psilorhynchus nahlongthai, a new fish species (Teleostei: Psilorhynchidae) from the Brahmaputra drainage, northeast India

Transcriptional dynamics of Zn-accumulation in developing kernels of maize reveals important Zn-uptake mechanisms

Nanopore-tweezers analysis of translocation by Escherichia coli RNA polymerase and yeast RNA polymerase II

RNA polymerase clamp conformational dynamics: long-lived states and modulation by crowding, cations, and nonspecific DNA binding

Fractional‐nucleotide translocation in sequence‐dependent pausing by RNA polymerase: Single‐molecule picometer‐resolution nanopore tweezers (SPRNT)

A peptide-based synthetic transcription factor selectively activates transcription in a mammalian cell

Confinement-Free Wide-Field Ratiometric Tracking of Single Fluorescent Molecules

Nanopore tweezers show fractional-nucleotide translocation in sequence-dependent pausing by RNA polymerase

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