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Cistrome Partitioning Reveals Convergence of Somatic Mutations and Risk Variants on Master Transcription Regulators in Primary Prostate Tumors

Cancer cell, 2019-12, Vol.36 (6), p.674-689.e6

2019

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Noncoding somatic and inherited single-nucleotide variants converge to promote ESR1 expression in breast cancer

Nature genetics, 2016-10, Vol.48 (10), p.1260-1266

2016

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Sa1894 SINGLE-CELL TRAJECTORY ANALYSIS IN MYELOID CELLS REVEALS CELLULAR SUBSTATE SPECIFIC INFORMATION ABOUT THE PATHOBIOLOGY OF ULCERATIVE COLITIS

Gastroenterology (New York, N.Y. 1943), 2024-05, Vol.166 (5), p.S-568-S-568

2024

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Identifying clusters of cis -regulatory elements underpinning TAD structures and lineage-specific regulatory networks

Genome research, 2019-10, Vol.29 (10), p.1733-1743

2019

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Tu1746 SINGLE-CELL TRANSCRIPTOMICS REVEAL TISSUE NEUTROPHIL HETEROGENEITY AND NEUTROPHIL-INFLAMMATORY FIBROBLAST SIGNALING PATHWAYS ASSOCIATED WITH RESISTANCE TO APPROVED THERAPIES IN ULCERATIVE COLITIS

Gastroenterology (New York, N.Y. 1943), 2024-05, Vol.166 (5), p.S-1404-S-1404

2024

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1137 ELEVATED OSM/OSMR EXPRESSION IN INFLAMED MUCOSAL TISSUE REFLECTS AN INFLAMMATORY CASCADE MEDIATED BY NEUTROPHIL:STROMAL INTERACTIONS ASSOCIATED WITH RESIDUAL DISEASE IN TREATMENT-REFRACTORY UC PATIENTS

Gastroenterology (New York, N.Y. 1943), 2024-05, Vol.166 (5), p.S-264-S-264

2024

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Noncoding mutations target cis-regulatory elements of the FOXA1 plexus in prostate cancer

Nature communications, 2020-01, Vol.11 (1), p.441-13, Article 441

2020

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Role of Noncoding Single Nucleotide Variants on Transcription Factors’ Activity in Cancer

Mazrooei, Parisa

2019

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CRISPRi screens reveal a DNA methylation-mediated 3D genome dependent causal mechanism in prostate cancer

Nature communications, 2021-03, Vol.12 (1), p.1781-15, Article 1781

2021

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Mutations in Noncoding Cis -Regulatory Elements Reveal Cancer Driver Cistromes in Luminal Breast Cancer

Molecular cancer research, 2022-01, Vol.20 (1), p.102-113

2022

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The logic of transcriptional regulator recruitment architecture at cis -regulatory modules controlling liver functions

Genome research, 2017-06, Vol.27 (6), p.985-996

2017

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Organizing combinatorial transcription factor recruitment at cis-regulatory modules

Transcription, 2018-08, Vol.9 (4), p.233-239

2018

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Collusion detection in sequential games

Mazrooei, Parisa

2012

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Social Networking Approach for Building Trust in E-commerce

Journal of communication and computer, 2010-06, Vol.7 (6), p.49-53

2010

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Automating Collusion Detection in Sequential Games

Proceedings of the ... AAAI Conference on Artificial Intelligence, 2013-06, Vol.27 (1), p.675-682

2013

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Proximity User Identification Using Correlogram

Intelligent Information Processing V, p.343-351

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A note on the P-time algorithms for solving the maximum independent set problem

2009 2nd Conference on Data Mining and Optimization, 2009, p.65-70

2009

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Cistrome Partitioning Reveals Convergence of Somatic Mutations and Risk Variants on Master Transcription Regulators in Primary Prostate Tumors

Noncoding somatic and inherited single-nucleotide variants converge to promote ESR1 expression in breast cancer

Sa1894 SINGLE-CELL TRAJECTORY ANALYSIS IN MYELOID CELLS REVEALS CELLULAR SUBSTATE SPECIFIC INFORMATION ABOUT THE PATHOBIOLOGY OF ULCERATIVE COLITIS

Identifying clusters of cis -regulatory elements underpinning TAD structures and lineage-specific regulatory networks

Tu1746 SINGLE-CELL TRANSCRIPTOMICS REVEAL TISSUE NEUTROPHIL HETEROGENEITY AND NEUTROPHIL-INFLAMMATORY FIBROBLAST SIGNALING PATHWAYS ASSOCIATED WITH RESISTANCE TO APPROVED THERAPIES IN ULCERATIVE COLITIS

1137 ELEVATED OSM/OSMR EXPRESSION IN INFLAMED MUCOSAL TISSUE REFLECTS AN INFLAMMATORY CASCADE MEDIATED BY NEUTROPHIL:STROMAL INTERACTIONS ASSOCIATED WITH RESIDUAL DISEASE IN TREATMENT-REFRACTORY UC PATIENTS

Noncoding mutations target cis-regulatory elements of the FOXA1 plexus in prostate cancer

Role of Noncoding Single Nucleotide Variants on Transcription Factors’ Activity in Cancer

CRISPRi screens reveal a DNA methylation-mediated 3D genome dependent causal mechanism in prostate cancer

Mutations in Noncoding Cis -Regulatory Elements Reveal Cancer Driver Cistromes in Luminal Breast Cancer

The logic of transcriptional regulator recruitment architecture at cis -regulatory modules controlling liver functions

Organizing combinatorial transcription factor recruitment at cis-regulatory modules

Collusion detection in sequential games

Social Networking Approach for Building Trust in E-commerce

Automating Collusion Detection in Sequential Games

Proximity User Identification Using Correlogram

A note on the P-time algorithms for solving the maximum independent set problem

Somatic Mutations and Risk-Variants Converge on Cis-Regulatory Elements to Reveal the Cancer Driver Transcription Regulators in Primary Prostate Tumors

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