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ENMTools 1.0: an R package for comparative ecological biogeography

Ecography (Copenhagen), 2021-04, Vol.44 (4), p.504-511

2021

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Bayesian Analysis of Biogeography when the Number of Areas is Large

Systematic biology, 2013-11, Vol.62 (6), p.789-804

2013

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Model Selection in Historical Biogeography Reveals that Founder-Event Speciation Is a Crucial Process in Island Clades

Systematic biology, 2014-11, Vol.63 (6), p.951-970

Matzke, Nicholas J.

2014

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Recent origin and rapid speciation of Neotropical orchids in the world’s richest plant biodiversity hotspot

The New phytologist, 2017-07, Vol.215 (2), p.891-905

2017

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Primary endosymbiosis events date to the later Proterozoic with cross-calibrated phylogenetic dating of duplicated ATPase proteins

Proceedings of the National Academy of Sciences - PNAS, 2013-07, Vol.110 (30), p.12355-12360

2013

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Treating Fossils as Terminal Taxa in Divergence Time Estimation Reveals Ancient Vicariance Patterns in the Palpimanoid Spiders

Systematic biology, 2013-03, Vol.62 (2), p.264-284

2013

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The incidence and implications of clouds for cloud forest plant water relations

Ecology letters, 2013-03, Vol.16 (3), p.307-314

2013

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Empirical and Bayesian approaches to fossil-only divergence times: A study across three reptile clades

PloS one, 2017-02, Vol.12 (2), p.e0169885-e0169885

2017

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Spatiotemporal Diversification of the True Frogs (Genus Rana): A Historical Framework for a Widely Studied Group of Model Organisms

Systematic biology, 2016-09, Vol.65 (5), p.824-842

2016

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Whole mitochondrial genome sequencing of domestic horses reveals incorporation of extensive wild horse diversity during domestication

BMC evolutionary biology, 2011-11, Vol.11 (1), p.328

2011

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Flagellar export apparatus and ATP synthetase: Homology evidenced by synteny predating the Last Universal Common Ancestor

BioEssays, 2021-07, Vol.43 (7), p.e2100004-n/a

2021

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Vitalism in New Zealand science education

Science (American Association for the Advancement of Science), 2024-07, Vol.385 (6705), p.152-152

Matzke, Nicholas J

2024

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Dating the Species Network: Allopolyploidy and Repetitive DNA Evolution in American Daisies (Melampodium sect. Melampodium, Asteraceae)

Systematic biology, 2018-11, Vol.67 (6), p.1010-1024

2018

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Genome duplication and multiple evolutionary origins of complex migratory behavior in Salmonidae

Molecular phylogenetics and evolution, 2013-12, Vol.69 (3), p.514-523

2013

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Taxon cycle predictions supported by model‐based inference in Indo‐Pacific trap‐jaw ants (Hymenoptera: Formicidae: Odontomachus)

Molecular ecology, 2018-10, Vol.27 (20), p.4090-4107

2018

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Including autapomorphies is important for paleontological tip-dating with clocklike data, but not with non-clock data

PeerJ (San Francisco, CA), 2018-04, Vol.6, p.e4553-e4553, Article e4553

2018

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Conservation paleobiology needs phylogenetic methods

Ecography (Copenhagen), 2014-11, Vol.37 (11), p.1109-1122

2014

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From The Origin of Species to the origin of bacterial flagella

Nature reviews. Microbiology, 2006-10, Vol.4 (10), p.784-790

2006

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Statistical Comparison of Trait-Dependent Biogeographical Models Indicates That Podocarpaceae Dispersal Is Influenced by Both Seed Cone Traits and Geographical Distance

Systematic biology, 2020-01, Vol.69 (1), p.61-75

2020

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Statistical comparison of DEC and DEC+J is identical to comparison of two ClaSSE submodels, and is therefore valid

Journal of biogeography, 2022-10, Vol.49 (10), p.1805-1824

Matzke, Nicholas J.

2022

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Ancestral Sequence Reconstructions of MotB Are Proton-Motile and Require MotA for Motility

Frontiers in microbiology, 2020-12, Vol.11, p.625837-625837

2020

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Habitat preference modulates trans-oceanic dispersal in a terrestrial vertebrate

Proceedings of the Royal Society. B, Biological sciences, 2019-06, Vol.286 (1904), p.20182575-20182575

2019

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Corrigendum: Ancestral Sequence Reconstructions of MotB Are Proton-Motile and Require MotA for Motility

Frontiers in microbiology, 2021-03, Vol.12, p.650373-650373

2021

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Inferring node dates from tip dates in fossil Canidae: the importance of tree priors

Biology letters (2005), 2016-08, Vol.12 (8), p.20160328-20160328

2016

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ENMTools 1.0: an R package for comparative ecological biogeography

Bayesian Analysis of Biogeography when the Number of Areas is Large

Model Selection in Historical Biogeography Reveals that Founder-Event Speciation Is a Crucial Process in Island Clades

Recent origin and rapid speciation of Neotropical orchids in the world’s richest plant biodiversity hotspot

Primary endosymbiosis events date to the later Proterozoic with cross-calibrated phylogenetic dating of duplicated ATPase proteins

Treating Fossils as Terminal Taxa in Divergence Time Estimation Reveals Ancient Vicariance Patterns in the Palpimanoid Spiders

The incidence and implications of clouds for cloud forest plant water relations

Climate refugia: joint inference from fossil records, species distribution models and phylogeography

Empirical and Bayesian approaches to fossil-only divergence times: A study across three reptile clades

Spatiotemporal Diversification of the True Frogs (Genus Rana): A Historical Framework for a Widely Studied Group of Model Organisms

Whole mitochondrial genome sequencing of domestic horses reveals incorporation of extensive wild horse diversity during domestication

Flagellar export apparatus and ATP synthetase: Homology evidenced by synteny predating the Last Universal Common Ancestor

Vitalism in New Zealand science education

Dating the Species Network: Allopolyploidy and Repetitive DNA Evolution in American Daisies (Melampodium sect. Melampodium, Asteraceae)

Genome duplication and multiple evolutionary origins of complex migratory behavior in Salmonidae

Taxon cycle predictions supported by model‐based inference in Indo‐Pacific trap‐jaw ants (Hymenoptera: Formicidae: Odontomachus)

Including autapomorphies is important for paleontological tip-dating with clocklike data, but not with non-clock data

Conservation paleobiology needs phylogenetic methods

From The Origin of Species to the origin of bacterial flagella

Statistical Comparison of Trait-Dependent Biogeographical Models Indicates That Podocarpaceae Dispersal Is Influenced by Both Seed Cone Traits and Geographical Distance

Statistical comparison of DEC and DEC+J is identical to comparison of two ClaSSE submodels, and is therefore valid

Ancestral Sequence Reconstructions of MotB Are Proton-Motile and Require MotA for Motility

Habitat preference modulates trans-oceanic dispersal in a terrestrial vertebrate

Corrigendum: Ancestral Sequence Reconstructions of MotB Are Proton-Motile and Require MotA for Motility

Inferring node dates from tip dates in fossil Canidae: the importance of tree priors

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