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So you think you can PLS-DA?

BMC bioinformatics, 2020-12, Vol.21 (Suppl 1), p.2-2, Article 2

2020

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A dynamic and intricate regulatory network determines Pseudomonas aeruginosa virulence

Nucleic acids research, 2013-01, Vol.41 (1), p.1-20

2013

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Metagenomics, Metatranscriptomics, and Metabolomics Approaches for Microbiome Analysis

Evolutionary Bioinformatics, 2016-05, Vol.2016 (S1), p.5-16

2016

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The gut microbiome and neuropsychiatric disorders: implications for attention deficit hyperactivity disorder (ADHD)

Journal of medical microbiology, 2020-01, Vol.69 (1), p.14-24

2020

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Inhibition of Quorum Sensing-Controlled Virulence Factor Production in Pseudomonas aeruginosa by South Florida Plant Extracts

Antimicrobial Agents and Chemotherapy, 2008-01, Vol.52 (1), p.198-203

2008

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New dynamic microreactor system to mimic biofilm formation and test anti-biofilm activity of nanoparticles

Applied microbiology and biotechnology, 2022-04, Vol.106 (7), p.2729-2738

2022

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Attention Deficit Hyperactivity Disorder (ADHD) and the gut microbiome: An ecological perspective

PloS one, 2023-08, Vol.18 (8), p.e0273890

2023

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Causal effects in microbiomes using interventional calculus

Scientific reports, 2021-03, Vol.11 (1), p.5724-5724, Article 5724

2021

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Inferring directional relationships in microbial communities using signed Bayesian networks

BMC genomics, 2020-12, Vol.21 (Suppl 6), p.663-663, Article 663

2020

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The regulatory repertoire of Pseudomonas aeruginosa AmpC ß-lactamase regulator AmpR includes virulence genes

PloS one, 2012-03, Vol.7 (3), p.e34067

2012

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Potential Autoimmunity Resulting from Molecular Mimicry between SARS-CoV-2 Spike and Human Proteins

Viruses, 2022-06, Vol.14 (7), p.1415

2022

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Current concepts in the pathogenesis and treatment of chronic suppurative otitis media

Journal of medical microbiology, 2015-10, Vol.64 (10), p.1103-1116

2015

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Multi-Run Concrete Autoencoder to Identify Prognostic lncRNAs for 12 Cancers

International journal of molecular sciences, 2021-11, Vol.22 (21), p.11919

2021

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Unfolding and de-confounding: biologically meaningful causal inference from longitudinal multi-omic networks using METALICA

mSystems, 2024-10, Vol.9 (10), p.e0130323

2024

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Forensic investigation into the origin of Pseudomonas aeruginosa PA14 - old but not lost

Journal of medical microbiology, 2018-08, Vol.67 (8), p.1019-1021

Mathee, Kalai

2018

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Differences in gut microbiota between Dutch and South-Asian Surinamese: potential implications for type 2 diabetes mellitus

Scientific reports, 2024-02, Vol.14 (1), p.4585-14, Article 4585

2024

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Dynamics of Pseudomonas aeruginosa genome evolution

Proceedings of the National Academy of Sciences - PNAS, 2008-02, Vol.105 (8), p.3100-3105

2008

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Prior exposure to microcystin alters host gut resistome and is associated with dysregulated immune homeostasis in translatable mouse models

Scientific reports, 2022-07, Vol.12 (1), p.1-19, Article 11516

2022

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Pseudomonas aeruginosa MifS-MifR Two-Component System Is Specific for α-Ketoglutarate Utilization

PloS one, 2015-06, Vol.10 (6), p.e0129629-e0129629

2015

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Identification of Novel Genomic Islands in Liverpool Epidemic Strain of Pseudomonas aeruginosa Using Segmentation and Clustering

Frontiers in microbiology, 2016-08, Vol.7, p.1210-1210

2016

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Characterization of N-acylhomoserine lactone-degrading bacteria associated with the Zingiber officinale (ginger) rhizosphere: co-existence of quorum quenching and quorum sensing in Acinetobacter and Burkholderia

BMC microbiology, 2011-03, Vol.11 (1), p.51-51

2011

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Microbiome Dysbiosis Shows Strong Association of Gut-Derived Altered Metabolomic Profile in Gulf War Chronic Multisymptom Illness Symptom Persistence Following Western Diet Feeding and Development of Obesity

International journal of molecular sciences, 2023-02, Vol.24 (4), p.4245

2023

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Pseudomonas aeruginosa Regulated Intramembrane Proteolysis: Protease MucP Can Overcome Mutations in the AlgO Periplasmic Protease To Restore Alginate Production in Nonmucoid Revertants

Journal of bacteriology, 2018-08, Vol.200 (16)

2018

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Structural and Functional Characterization of Pseudomonas aeruginosa Global Regulator AmpR

Journal of bacteriology, 2014-11, Vol.196 (22), p.3890-3902

2014

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Plasmin Cascade Mediates Thrombotic Events in SARS-CoV-2 Infection via Complement and Platelet-Activating Systems

IEEE open journal of engineering in medicine and biology, 2020-01, Vol.1, p.220-227

2020

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So you think you can PLS-DA?

A dynamic and intricate regulatory network determines Pseudomonas aeruginosa virulence

Metagenomics, Metatranscriptomics, and Metabolomics Approaches for Microbiome Analysis

The gut microbiome and neuropsychiatric disorders: implications for attention deficit hyperactivity disorder (ADHD)

Inhibition of Quorum Sensing-Controlled Virulence Factor Production in Pseudomonas aeruginosa by South Florida Plant Extracts

New dynamic microreactor system to mimic biofilm formation and test anti-biofilm activity of nanoparticles

Attention Deficit Hyperactivity Disorder (ADHD) and the gut microbiome: An ecological perspective

Causal effects in microbiomes using interventional calculus

Inferring directional relationships in microbial communities using signed Bayesian networks

The regulatory repertoire of Pseudomonas aeruginosa AmpC ß-lactamase regulator AmpR includes virulence genes

Potential Autoimmunity Resulting from Molecular Mimicry between SARS-CoV-2 Spike and Human Proteins

Current concepts in the pathogenesis and treatment of chronic suppurative otitis media

Multi-Run Concrete Autoencoder to Identify Prognostic lncRNAs for 12 Cancers

Unfolding and de-confounding: biologically meaningful causal inference from longitudinal multi-omic networks using METALICA

Forensic investigation into the origin of Pseudomonas aeruginosa PA14 - old but not lost

Differences in gut microbiota between Dutch and South-Asian Surinamese: potential implications for type 2 diabetes mellitus

Dynamics of Pseudomonas aeruginosa genome evolution

Prior exposure to microcystin alters host gut resistome and is associated with dysregulated immune homeostasis in translatable mouse models

Pseudomonas aeruginosa MifS-MifR Two-Component System Is Specific for α-Ketoglutarate Utilization

Identification of Novel Genomic Islands in Liverpool Epidemic Strain of Pseudomonas aeruginosa Using Segmentation and Clustering

Characterization of N-acylhomoserine lactone-degrading bacteria associated with the Zingiber officinale (ginger) rhizosphere: co-existence of quorum quenching and quorum sensing in Acinetobacter and Burkholderia

Microbiome Dysbiosis Shows Strong Association of Gut-Derived Altered Metabolomic Profile in Gulf War Chronic Multisymptom Illness Symptom Persistence Following Western Diet Feeding and Development of Obesity

Pseudomonas aeruginosa Regulated Intramembrane Proteolysis: Protease MucP Can Overcome Mutations in the AlgO Periplasmic Protease To Restore Alginate Production in Nonmucoid Revertants

Structural and Functional Characterization of Pseudomonas aeruginosa Global Regulator AmpR

Plasmin Cascade Mediates Thrombotic Events in SARS-CoV-2 Infection via Complement and Platelet-Activating Systems

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