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Explainable artificial intelligence as a reliable annotator of archaeal promoter regions

Scientific reports, 2023-01, Vol.13 (1), p.1763-1763, Article 1763

2023

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Identification of Marker Genes in Infectious Diseases from ScRNA-seq Data Using Interpretable Machine Learning

International journal of molecular sciences, 2024-06, Vol.25 (11), p.5920

2024

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Convergence in Mobility Data Sets From Apple, Google, and Meta

JMIR public health and surveillance, 2023-06, Vol.9, p.e44286-e44286

2023

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The impact of public transportation on the transmission of COVID-19 in Rwanda

Frontiers in public health, 2024-02, Vol.12, p.1345433-1345433

2024

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Evaluating the effectiveness of lockdowns and restrictions during SARS-CoV-2 variant waves in the Canadian province of Nova Scotia

Frontiers in public health, 2023-04, Vol.11, p.1142602-1142602

2023

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Machine learning and statistics shape a novel path in archaeal promoter annotation

BMC bioinformatics, 2022-05, Vol.23 (1), p.171-171, Article 171

2022

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Understanding knowledge, attitudes and practices on Ebola Virus Disease: a multi-site mixed methods survey on preparedness in Rwanda

BMC public health, 2023-12, Vol.23 (1), p.2417-2417, Article 2417

2023

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PoxiPred: An Artificial-Intelligence-Based Method for the Prediction of Potential Antigens and Epitopes to Accelerate Vaccine Development Efforts against Poxviruses

Biology (Basel, Switzerland), 2024-02, Vol.13 (2), p.125

2024

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PASC (Post Acute Sequelae of COVID-19) is associated with decreased neutralizing antibody titers in both biological sexes and increased ANG-2 and GM-CSF in females

Scientific reports, 2024-04, Vol.14 (1), p.9854-9854, Article 9854

2024

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Model-interpreted outcomes of artificial neural networks classifying immune biomarkers associated with severe infections in ICU

Frontiers in immunology, 2023-03, Vol.14, p.1137850-1137850

2023

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Formulation of next-generation polyvalent vaccine candidates against three important poxviruses by targeting DNA-dependent RNA polymerase using an integrated immunoinformatics and molecular modeling approach

Journal of infection and public health, 2024-07, Vol.17 (7), p.102470, Article 102470

2024

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Transcriptomics reveals shared immunosuppressive landscapes in ventilator-associated lower respiratory tract infections (VA-LRTI) patients

Expert review of anti-infective therapy, 2023-10, Vol.21 (10), p.1135-1141

2023

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Complete Genome Sequencing, Annotation, and Mutational Profiling of the Novel Clade I Human Mpox Virus, Kamituga Strain

Journal of infection in developing countries, 2024-04, Vol.18 (4), p.600-608

2024

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Characterization of promoters in archaeal genomes based on DNA structural parameters

MicrobiologyOpen (Weinheim), 2021-10, Vol.10 (5), p.e1230-n/a

2021

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Beyond consensual motifs: an analysis of DNA curvature within Escherichia coli promoters

Biológia, 2022-04, Vol.77 (4), p.1095-1102

2022

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Parallel Dysregulated Immune Response in Severe Forms of COVID-19 and Bacterial Sepsis via Single-Cell Transcriptome Sequencing

Biomedicines, 2023-03, Vol.11 (3), p.778

2023

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DNA structural and physical properties reveal peculiarities in promoter sequences of the bacterium Escherichia coli K-12

SN applied sciences, 2021-08, Vol.3 (8), p.740-10, Article 740

2021

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Genome Evolution and Early Introductions of the SARS-CoV-2 Omicron Variant in Mexico

Virus evolution, 2022, Vol.8 (2), p.veac109-veac109

2022

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MLDSPP: Bacterial Promoter Prediction Tool Using DNA Structural Properties with Machine Learning and Explainable AI

Journal of chemical information and modeling, 2024-04, Vol.64 (7), p.2705-2719

2024

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Multiple Protein Profiler 1.0 (MPP): A Webserver for Predicting and Visualizing Physiochemical Properties of Proteins at the Proteome Level

The Protein Journal, 2024-08, Vol.43 (4), p.711-717

2024

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Inhibition potential of natural flavonoids against selected omicron (B.1.19) mutations in the spike receptor binding domain of SARS-CoV-2: a molecular modeling approach

Journal of biomolecular structure & dynamics, 2023-12, p.1-15

2023

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Genome Alignments

Reference Module in Life Sciences, 2017

2017

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Pressurized liquid extraction coupled in-line with SPE and on-line with HPLC (PLE-SPExHPLC) for the recovery and purification of anthocyanins from SC-CO2 semi-defatted Açaí (Euterpe oleracea)

Food research international, 2022-10, Vol.160, p.111711-111711, Article 111711

2022

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Explainable artificial intelligence as a reliable annotator of archaeal promoter regions

Identification of Marker Genes in Infectious Diseases from ScRNA-seq Data Using Interpretable Machine Learning

Convergence in Mobility Data Sets From Apple, Google, and Meta

The impact of public transportation on the transmission of COVID-19 in Rwanda

Evaluating the effectiveness of lockdowns and restrictions during SARS-CoV-2 variant waves in the Canadian province of Nova Scotia

Machine learning and statistics shape a novel path in archaeal promoter annotation

Understanding knowledge, attitudes and practices on Ebola Virus Disease: a multi-site mixed methods survey on preparedness in Rwanda

PoxiPred: An Artificial-Intelligence-Based Method for the Prediction of Potential Antigens and Epitopes to Accelerate Vaccine Development Efforts against Poxviruses

PASC (Post Acute Sequelae of COVID-19) is associated with decreased neutralizing antibody titers in both biological sexes and increased ANG-2 and GM-CSF in females

Model-interpreted outcomes of artificial neural networks classifying immune biomarkers associated with severe infections in ICU

Formulation of next-generation polyvalent vaccine candidates against three important poxviruses by targeting DNA-dependent RNA polymerase using an integrated immunoinformatics and molecular modeling approach

Transcriptomics reveals shared immunosuppressive landscapes in ventilator-associated lower respiratory tract infections (VA-LRTI) patients

Complete Genome Sequencing, Annotation, and Mutational Profiling of the Novel Clade I Human Mpox Virus, Kamituga Strain

Characterization of promoters in archaeal genomes based on DNA structural parameters

Beyond consensual motifs: an analysis of DNA curvature within Escherichia coli promoters

Parallel Dysregulated Immune Response in Severe Forms of COVID-19 and Bacterial Sepsis via Single-Cell Transcriptome Sequencing

DNA structural and physical properties reveal peculiarities in promoter sequences of the bacterium Escherichia coli K-12

Genome Evolution and Early Introductions of the SARS-CoV-2 Omicron Variant in Mexico

MLDSPP: Bacterial Promoter Prediction Tool Using DNA Structural Properties with Machine Learning and Explainable AI

Multiple Protein Profiler 1.0 (MPP): A Webserver for Predicting and Visualizing Physiochemical Properties of Proteins at the Proteome Level

Inhibition potential of natural flavonoids against selected omicron (B.1.19) mutations in the spike receptor binding domain of SARS-CoV-2: a molecular modeling approach

Genome Alignments

Pressurized liquid extraction coupled in-line with SPE and on-line with HPLC (PLE-SPExHPLC) for the recovery and purification of anthocyanins from SC-CO2 semi-defatted Açaí (Euterpe oleracea)

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