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Global epidemiology of capsular group W meningococcal disease (1970–2015): Multifocal emergence and persistence of hypervirulent sequence type (ST)-11 clonal complex

Vaccine, 2016-03, Vol.34 (13), p.1515-1523

2016

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Use of Multilocus Variable Number of Tandem Repeats Analysis Genotyping to Determine the Role of Asymptomatic Carriers in Clostridium difficile Transmission

Clinical infectious diseases, 2013-10, Vol.57 (8), p.1094-1102

2013

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Genomic Epidemiology of an Endoscope-Associated Outbreak of Klebsiella pneumoniae Carbapenemase (KPC)-Producing K. pneumoniae

PloS one, 2015-12, Vol.10 (12), p.e0144310-e0144310

2015

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Systematic detection of horizontal gene transfer across genera among multidrug-resistant bacteria in a single hospital

eLife, 2020-04, Vol.9

2020

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Association of Relapse of Clostridium difficile Disease with BI/NAP1/027

Journal of Clinical Microbiology, 2012-12, Vol.50 (12), p.4078-4082

2012

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Evolution of Outbreak-Causing Carbapenem-Resistant Klebsiella pneumoniae ST258 at a Tertiary Care Hospital over 8 Years

mBio, 2019-09, Vol.10 (5)

2019

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Predictive model for severe COVID-19 using SARS-CoV-2 whole-genome sequencing and electronic health record data, March 2020-May 2021

PloS one, 2022-07, Vol.17 (7), p.e0271381-e0271381

2022

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Genomic characterization of SARS-CoV-2 from vaccine breakthrough cases in Allegheny County, Pennsylvania

PloS one, 2022-08, Vol.17 (8), p.e0272954

2022

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Prevalence of Clostridium difficile in Uncooked Ground Meat Products from Pittsburgh, Pennsylvania

Applied and Environmental Microbiology, 2012-06, Vol.78 (12), p.4183-4186

2012

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Control of an Outbreak of Infection with the Hypervirulent Clostridium difficile BI Strain in a University Hospital Using a Comprehensive "Bundle" Approach

Clinical infectious diseases, 2007-11, Vol.45 (10), p.1266-1273

2007

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tcdC Genotypes Associated with Severe TcdC Truncation in an Epidemic Clone and Other Strains of Clostridium difficile

Journal of Clinical Microbiology, 2007-01, Vol.45 (1), p.215-221

2007

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Integron-mediated multidrug resistance in a global collection of nontyphoidal Salmonella enterica isolates

Emerging infectious diseases, 2009-03, Vol.15 (3), p.388-396

2009

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High Frequency of Rifampin Resistance Identified in an Epidemic Clostridium difficile Clone from a Large Teaching Hospital

Clinical infectious diseases, 2009-02, Vol.48 (4), p.425-429

2009

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Two Cases of Newly Characterized Neisseria Species, Brazil

Emerging infectious diseases, 2020-02, Vol.26 (2), p.366-369

2020

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Population Structure and Capsular Switching of Invasive Neisseria meningitidis Isolates in the Pre-Meningococcal Conjugate Vaccine Era—United States, 2000–2005

The Journal of infectious diseases, 2010-04, Vol.201 (8), p.1208-1224

2010

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Genomic Epidemiology of Hypervirulent Serogroup W, ST-11 Neisseria meningitidis

EBioMedicine, 2015-10, Vol.2 (10), p.1447-1455

2015

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Whole-genome sequencing surveillance and machine learning for healthcare outbreak detection and investigation: A systematic review and summary

Antimicrobial stewardship & healthcare epidemiology : ASHE, 2022, Vol.2 (1), p.e91-e91, Article e91

2022

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Genomic Diversity of Hospital-Acquired Infections Revealed through Prospective Whole-Genome Sequencing-Based Surveillance

mSystems, 2022-06, Vol.7 (3), p.e0138421-e0138421

2022

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Multilocus Variable-Number Tandem-Repeat Analysis for Investigation of Clostridium difficile Transmission in Hospitals

Journal of Clinical Microbiology, 2006-07, Vol.44 (7), p.2558-2566

2006

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Whole genome sequencing to investigate the emergence of clonal complex 23 Neisseria meningitidis serogroup Y disease in the United States

PloS one, 2012-04, Vol.7 (4), p.e35699-e35699

2012

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Multilocus Variable-Number Tandem-Repeat Analysis and Multilocus Sequence Typing Reveal Genetic Relationships among Clostridium difficile Isolates Genotyped by Restriction Endonuclease Analysis

Journal of Clinical Microbiology, 2010-02, Vol.48 (2), p.412-418

2010

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Estimating risk of C. difficile transmission from PCR positive but cytotoxin negative cases

PloS one, 2014-02, Vol.9 (2), p.e88262

2014

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Antigenic Shift and Increased Incidence of Meningococcal Disease

The Journal of infectious diseases, 2006-05, Vol.193 (9), p.1266-1274

2006

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First detection of SARS‐CoV‐2 Omicron BA.4 variant in Western Pennsylvania, United States

Journal of medical virology, 2022-09, Vol.94 (9), p.4053-4055

2022

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Perirectal Swab Surveillance for Clostridium difficile by Use of Selective Broth Preamplification and Real-Time PCR Detection of tcdB

Journal of Clinical Microbiology, 2011-11, Vol.49 (11), p.3788-3793

2011

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Global epidemiology of capsular group W meningococcal disease (1970–2015): Multifocal emergence and persistence of hypervirulent sequence type (ST)-11 clonal complex

Use of Multilocus Variable Number of Tandem Repeats Analysis Genotyping to Determine the Role of Asymptomatic Carriers in Clostridium difficile Transmission

Genomic Epidemiology of an Endoscope-Associated Outbreak of Klebsiella pneumoniae Carbapenemase (KPC)-Producing K. pneumoniae

Systematic detection of horizontal gene transfer across genera among multidrug-resistant bacteria in a single hospital

Association of Relapse of Clostridium difficile Disease with BI/NAP1/027

Evolution of Outbreak-Causing Carbapenem-Resistant Klebsiella pneumoniae ST258 at a Tertiary Care Hospital over 8 Years

Predictive model for severe COVID-19 using SARS-CoV-2 whole-genome sequencing and electronic health record data, March 2020-May 2021

Genomic characterization of SARS-CoV-2 from vaccine breakthrough cases in Allegheny County, Pennsylvania

Prevalence of Clostridium difficile in Uncooked Ground Meat Products from Pittsburgh, Pennsylvania

Control of an Outbreak of Infection with the Hypervirulent Clostridium difficile BI Strain in a University Hospital Using a Comprehensive "Bundle" Approach

tcdC Genotypes Associated with Severe TcdC Truncation in an Epidemic Clone and Other Strains of Clostridium difficile

Integron-mediated multidrug resistance in a global collection of nontyphoidal Salmonella enterica isolates

High Frequency of Rifampin Resistance Identified in an Epidemic Clostridium difficile Clone from a Large Teaching Hospital

Two Cases of Newly Characterized Neisseria Species, Brazil

Population Structure and Capsular Switching of Invasive Neisseria meningitidis Isolates in the Pre-Meningococcal Conjugate Vaccine Era—United States, 2000–2005

Genomic Epidemiology of Hypervirulent Serogroup W, ST-11 Neisseria meningitidis

Whole-genome sequencing surveillance and machine learning for healthcare outbreak detection and investigation: A systematic review and summary

Genomic Diversity of Hospital-Acquired Infections Revealed through Prospective Whole-Genome Sequencing-Based Surveillance

Multilocus Variable-Number Tandem-Repeat Analysis for Investigation of Clostridium difficile Transmission in Hospitals

Whole genome sequencing to investigate the emergence of clonal complex 23 Neisseria meningitidis serogroup Y disease in the United States

Multilocus Variable-Number Tandem-Repeat Analysis and Multilocus Sequence Typing Reveal Genetic Relationships among Clostridium difficile Isolates Genotyped by Restriction Endonuclease Analysis

Estimating risk of C. difficile transmission from PCR positive but cytotoxin negative cases

Antigenic Shift and Increased Incidence of Meningococcal Disease

First detection of SARS‐CoV‐2 Omicron BA.4 variant in Western Pennsylvania, United States

Perirectal Swab Surveillance for Clostridium difficile by Use of Selective Broth Preamplification and Real-Time PCR Detection of tcdB

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