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Germline variant burden in cancer genes correlates with age at diagnosis and somatic mutation burden

Nature communications, 2020-05, Vol.11 (1), p.2438-2438, Article 2438

2020

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Ranking metrics in gene set enrichment analysis: do they matter?

BMC bioinformatics, 2017-05, Vol.18 (1), p.256-256, Article 256

2017

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BatchI: Batch effect Identification in high-throughput screening data using a dynamic programming algorithm

Bioinformatics (Oxford, England), 2019-06, Vol.35 (11), p.1885-1892

2019

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Analysis of the Applicability of microRNAs in Peripheral Blood Leukocytes as Biomarkers of Sensitivity and Exposure to Fractionated Radiotherapy towards Breast Cancer

International journal of molecular sciences, 2021-08, Vol.22 (16), p.8705

2021

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Signal Partitioning Algorithm for Highly Efficient Gaussian Mixture Modeling in Mass Spectrometry

PloS one, 2015-07, Vol.10 (7), p.e0134256-e0134256

2015

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Importance of SNP Dependency Correction and Association Integration for Gene Set Analysis in Genome-Wide Association Studies

Frontiers in genetics, 2021-12, Vol.12, p.767358-767358

2021

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The impact of RNA extraction method on accurate RNA sequencing from formalin-fixed paraffin-embedded tissues

BMC cancer, 2019-12, Vol.19 (1), p.1189-1189, Article 1189

2019

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Neoadjuvant durvalumab plus weekly nab-paclitaxel and dose-dense doxorubicin/cyclophosphamide in triple-negative breast cancer

NPJ breast cancer, 2021-02, Vol.7 (1), p.9-7, Article 9

2021

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Quantifying Spatial Heterogeneity of Tumor-Infiltrating Lymphocytes to Predict Survival of Individual Cancer Patients

Journal of personalized medicine, 2022-07, Vol.12 (7), p.1113

2022

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Treatment scheduling effects on the evolution of drug resistance in heterogeneous cancer cell populations

NPJ breast cancer, 2021-05, Vol.7 (1), p.60-60, Article 60

2021

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Targeted RNAseq assay incorporating unique molecular identifiers for improved quantification of gene expression signatures and transcribed mutation fraction in fixed tumor samples

BMC cancer, 2021-02, Vol.21 (1), p.114-114, Article 114

2021

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Evaluation of zero counts to better understand the discrepancies between bulk and single-cell RNA-Seq platforms

Computational and structural biotechnology journal, 2023-01, Vol.21, p.4663-4674

2023

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Diverse immune response of DNA damage repair-deficient tumors

Cell reports. Medicine, 2021-05, Vol.2 (5), p.100276-100276, Article 100276

2021

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Combining Low-Dose Computer-Tomography-Based Radiomics and Serum Metabolomics for Diagnosis of Malignant Nodules in Participants of Lung Cancer Screening Studies

Biomolecules (Basel, Switzerland), 2024-01, Vol.14 (1), p.44

2024

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Molecular Profiling for Predictors of Radiosensitivity in Patients with Breast or Head-and-Neck Cancer

Cancers, 2020-03, Vol.12 (3), p.753

2020

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Sources of high variance between probe signals in Affymetrix short oligonucleotide microarrays

Sensors (Basel, Switzerland), 2013-12, Vol.14 (1), p.532-548

2013

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Improved Detection of 2D Gel Electrophoresis Spots by Using Gaussian Mixture Model

Bioinformatics Research and Applications, p.284-294

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Molecular differences between younger versus older ER-positive and HER2-negative breast cancers

NPJ breast cancer, 2022-11, Vol.8 (1), p.119-119, Article 119

2022

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Passenger Location Estimation in Public Transport: Evaluating Methods and Camera Placement Impact

IEEE transactions on intelligent transportation systems, 2024-08, p.1-10

2024

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Author Correction: Neoadjuvant durvalumab plus weekly nab-paclitaxel and dose-dense doxorubicin/cyclophosphamide in triple-negative breast cancer

NPJ breast cancer, 2022-02, Vol.8 (1), p.17-17, Article 17

2022

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Influence of single-cell RNA sequencing data integration on the performance of differential gene expression analysis

Frontiers in genetics, 2022-11, Vol.13, p.1009316-1009316

2022

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Short- and long-term effects of radiation exposure at low dose and low dose rate in normal human VH10 fibroblasts

Frontiers in public health, 2023, Vol.11, p.1297942-1297942

2023

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POLCOVID: a multicenter multiclass chest X-ray database (Poland, 2020-2021)

Scientific data, 2023-06, Vol.10 (1), p.348-348, Article 348

2023

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Radiation-induced changes in serum lipidome of head and neck cancer patients

International journal of molecular sciences, 2014-04, Vol.15 (4), p.6609-6624

2014

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Tumor immune microenvironment of self-identified African American and non-African American triple negative breast cancer

NPJ breast cancer, 2022-07, Vol.8 (1), p.88-88, Article 88

2022

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Germline variant burden in cancer genes correlates with age at diagnosis and somatic mutation burden

Ranking metrics in gene set enrichment analysis: do they matter?

BatchI: Batch effect Identification in high-throughput screening data using a dynamic programming algorithm

Analysis of the Applicability of microRNAs in Peripheral Blood Leukocytes as Biomarkers of Sensitivity and Exposure to Fractionated Radiotherapy towards Breast Cancer

Signal Partitioning Algorithm for Highly Efficient Gaussian Mixture Modeling in Mass Spectrometry

Importance of SNP Dependency Correction and Association Integration for Gene Set Analysis in Genome-Wide Association Studies

The impact of RNA extraction method on accurate RNA sequencing from formalin-fixed paraffin-embedded tissues

Neoadjuvant durvalumab plus weekly nab-paclitaxel and dose-dense doxorubicin/cyclophosphamide in triple-negative breast cancer

Quantifying Spatial Heterogeneity of Tumor-Infiltrating Lymphocytes to Predict Survival of Individual Cancer Patients

Treatment scheduling effects on the evolution of drug resistance in heterogeneous cancer cell populations

Targeted RNAseq assay incorporating unique molecular identifiers for improved quantification of gene expression signatures and transcribed mutation fraction in fixed tumor samples

Evaluation of zero counts to better understand the discrepancies between bulk and single-cell RNA-Seq platforms

Diverse immune response of DNA damage repair-deficient tumors

Combining Low-Dose Computer-Tomography-Based Radiomics and Serum Metabolomics for Diagnosis of Malignant Nodules in Participants of Lung Cancer Screening Studies

Molecular Profiling for Predictors of Radiosensitivity in Patients with Breast or Head-and-Neck Cancer

Sources of high variance between probe signals in Affymetrix short oligonucleotide microarrays

Improved Detection of 2D Gel Electrophoresis Spots by Using Gaussian Mixture Model

Molecular differences between younger versus older ER-positive and HER2-negative breast cancers

Passenger Location Estimation in Public Transport: Evaluating Methods and Camera Placement Impact

Author Correction: Neoadjuvant durvalumab plus weekly nab-paclitaxel and dose-dense doxorubicin/cyclophosphamide in triple-negative breast cancer

Influence of single-cell RNA sequencing data integration on the performance of differential gene expression analysis

Short- and long-term effects of radiation exposure at low dose and low dose rate in normal human VH10 fibroblasts

POLCOVID: a multicenter multiclass chest X-ray database (Poland, 2020-2021)

Radiation-induced changes in serum lipidome of head and neck cancer patients

Tumor immune microenvironment of self-identified African American and non-African American triple negative breast cancer

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