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Amyotrophic Lateral Sclerosis associated FUS mutation shortens mitochondria and induces neurotoxicity

Scientific reports, 2018-10, Vol.8 (1), p.15575-15, Article 15575

2018

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Ribothrypsis, a novel process of canonical mRNA decay, mediates ribosome-phased mRNA endonucleolysis

Nature structural & molecular biology, 2018-04, Vol.25 (4), p.302-310

2018

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Functional microRNA targets in protein coding sequences

Bioinformatics (Oxford, England), 2012-03, Vol.28 (6), p.771-776

2012

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SamQL: a structured query language and filtering tool for the SAM/BAM file format

BMC bioinformatics, 2021-10, Vol.22 (1), p.1-474, Article 474

2021

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DIANA-LncBase: experimentally verified and computationally predicted microRNA targets on long non-coding RNAs

Nucleic acids research, 2013-01, Vol.41 (Database issue), p.D239-D245

2013

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Mili and Miwi target RNA repertoire reveals piRNA biogenesis and function of Miwi in spermiogenesis

Nature structural & molecular biology, 2012-08, Vol.19 (8), p.773-781

2012

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Retention of CD19 intron 2 contributes to CART-19 resistance in leukemias with subclonal frameshift mutations in CD19

Leukemia, 2020-04, Vol.34 (4), p.1202-1207

2020

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The RNA helicase MOV10L1 binds piRNA precursors to initiate piRNA processing

Genes & development, 2015-03, Vol.29 (6), p.617-629

2015

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Lost in translation: an assessment and perspective for computational microRNA target identification

Bioinformatics, 2009-12, Vol.25 (23), p.3049-3055

2009

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The MOV10 RNA helicase is a dosage-dependent host restriction factor for LINE1 retrotransposition in mice

PLoS genetics, 2023-05, Vol.19 (5), p.e1010566-e1010566

2023

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CLIPSeqTools--a novel bioinformatics CLIP-seq analysis suite

RNA (Cambridge), 2016-01, Vol.22 (1), p.1-9

2016

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Kc167, a widely used Drosophila cell line, contains an active primary piRNA pathway

RNA (Cambridge), 2017-01, Vol.23 (1), p.108-118

2017

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Gene body DNA hydroxymethylation restricts the magnitude of transcriptional changes during aging

Nature communications, 2024-07, Vol.15 (1), p.6357-22, Article 6357

2024

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Accurate microRNA target prediction correlates with protein repression levels

BMC bioinformatics, 2009-09, Vol.10 (1), p.295-295, Article 295

2009

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Mitochondrial protein BmPAPI modulates the length of mature piRNAs

RNA (Cambridge), 2013-10, Vol.19 (10), p.1405-1418

2013

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The DIANA-mirExTra web server: from gene expression data to microRNA function

PloS one, 2010-02, Vol.5 (2), p.e9171-e9171

2010

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Identification of In Vivo, Conserved, TAF15 RNA Binding Sites Reveals the Impact of TAF15 on the Neuronal Transcriptome

Cell reports (Cambridge), 2013-02, Vol.3 (2), p.301-308

2013

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Sequence-dependent but not sequence-specific piRNA adhesion traps mRNAs to the germ plasm

Nature (London), 2016-03, Vol.531 (7594), p.390-394

2016

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TERA-Seq: true end-to-end sequencing of native RNA molecules for transcriptome characterization

Nucleic acids research, 2021-11, Vol.49 (20), p.e115-e115

2021

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TarBase 6.0: capturing the exponential growth of miRNA targets with experimental support

Nucleic acids research, 2012-01, Vol.40 (Database issue), p.D222-D229

2012

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DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways

Nucleic acids research, 2012-07, Vol.40 (Web Server issue), p.W498-W504

2012

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FUS regulates genes coding for RNA-binding proteins in neurons by binding to their highly conserved introns

RNA (Cambridge), 2013-04, Vol.19 (4), p.498-509

2013

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Ribonucleic Acid-Mediated Control of Protein Translation Under Stress

Antioxidants & redox signaling, 2023-08, Vol.39 (4-6), p.374-389

2023

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A MicroRNA Precursor Surveillance System in Quality Control of MicroRNA Synthesis

Molecular cell, 2014-09, Vol.55 (6), p.868-879

2014

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cCLIP-Seq: Retrieval of Chimeric Reads from HITS-CLIP (CLIP-Seq) Libraries

Methods in molecular biology (Clifton, N.J.), 2018-01, Vol.1680, p.87

2018

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Amyotrophic Lateral Sclerosis associated FUS mutation shortens mitochondria and induces neurotoxicity

Ribothrypsis, a novel process of canonical mRNA decay, mediates ribosome-phased mRNA endonucleolysis

Functional microRNA targets in protein coding sequences

SamQL: a structured query language and filtering tool for the SAM/BAM file format

DIANA-LncBase: experimentally verified and computationally predicted microRNA targets on long non-coding RNAs

Mili and Miwi target RNA repertoire reveals piRNA biogenesis and function of Miwi in spermiogenesis

Retention of CD19 intron 2 contributes to CART-19 resistance in leukemias with subclonal frameshift mutations in CD19

The RNA helicase MOV10L1 binds piRNA precursors to initiate piRNA processing

Lost in translation: an assessment and perspective for computational microRNA target identification

The MOV10 RNA helicase is a dosage-dependent host restriction factor for LINE1 retrotransposition in mice

CLIPSeqTools--a novel bioinformatics CLIP-seq analysis suite

Kc167, a widely used Drosophila cell line, contains an active primary piRNA pathway

Gene body DNA hydroxymethylation restricts the magnitude of transcriptional changes during aging

Accurate microRNA target prediction correlates with protein repression levels

Mitochondrial protein BmPAPI modulates the length of mature piRNAs

The DIANA-mirExTra web server: from gene expression data to microRNA function

Identification of In Vivo, Conserved, TAF15 RNA Binding Sites Reveals the Impact of TAF15 on the Neuronal Transcriptome

Sequence-dependent but not sequence-specific piRNA adhesion traps mRNAs to the germ plasm

TERA-Seq: true end-to-end sequencing of native RNA molecules for transcriptome characterization

TarBase 6.0: capturing the exponential growth of miRNA targets with experimental support

DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways

FUS regulates genes coding for RNA-binding proteins in neurons by binding to their highly conserved introns

Ribonucleic Acid-Mediated Control of Protein Translation Under Stress

A MicroRNA Precursor Surveillance System in Quality Control of MicroRNA Synthesis

cCLIP-Seq: Retrieval of Chimeric Reads from HITS-CLIP (CLIP-Seq) Libraries

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