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Robust Plant Cell Tracking in Fluorescence Microscopy 3D+T Series

2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI), 2022, p.1-4

2022

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In Toto Imaging and Reconstruction of Post-Implantation Mouse Development at the Single-Cell Level

Cell, 2018-10, Vol.175 (3), p.859-876.e33

2018

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A tree-topology preserving pairing for 3D/2D registration

International journal for computer assisted radiology and surgery, 2015-06, Vol.10 (6), p.913-923

2015

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Planar cell polarity genes frizzled4 and frizzled6 exert patterning influence on arterial vessel morphogenesis

PloS one, 2017-03, Vol.12 (3), p.e0171033-e0171033

2017

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Robust mosaicing with correction of motion distortions and tissue deformations for in vivo fibered microscopy

Medical image analysis, 2006-10, Vol.10 (5), p.673-692

2006

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A three-dimensional histological atlas of the human basal ganglia. II. Atlas deformation strategy and evaluation in deep brain stimulation for Parkinson disease

Journal of neurosurgery, 2009-02, Vol.110 (2), p.208-219

2009

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Contact area–dependent cell communication and the morphological invariance of ascidian embryogenesis

Science (American Association for the Advancement of Science), 2020-07, Vol.369 (6500)

2020

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3D Coronary Vessel Tree Tracking in X-Ray Projections

Functional Imaging and Modeling of the Heart, p.388-396

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Assessing the ability of the 2D Fisher–KPP equation to model cell-sheet wound closure

Mathematical biosciences, 2014-06, Vol.252, p.45-59

2014

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A pre-clinical assessment of an atlas-based automatic segmentation tool for the head and neck

Radiotherapy and oncology, 2009-12, Vol.93 (3), p.474-478

2009

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Model-Based Detection of Tubular Structures in 3D Images

Computer vision and image understanding, 2000-11, Vol.80 (2), p.130-171

2000

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Blockwise processing applied to brain microvascular network study

IEEE transactions on medical imaging, 2006-10, Vol.25 (10), p.1319-1328

2006

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Coherent temporal extrapolation of labeled images

2017 IEEE 14th International Symposium on Biomedical Imaging (ISBI 2017), 2017, p.433-436

2017

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Imaging plant growth in 4D: robust tissue reconstruction and lineaging at cell resolution

Nature methods, 2010-07, Vol.7 (7), p.547-553

2010

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Embryo-scale epithelial buckling forms a propagating furrow that initiates gastrulation

Nature communications, 2022-06, Vol.13 (1), p.3348-3348, Article 3348

2022

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A multiscale analysis of early flower development in Arabidopsis provides an integrated view of molecular regulation and growth control

Developmental cell, 2021-02, Vol.56 (4), p.540-556.e8

2021

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Intensity-based matching and registration for 3D correlative microscopy with large discrepancies

2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018), 2018, p.493-496

2018

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3D Coronary Vessel Tracking in X-Ray Projections

Functional Imaging and Modelling of the Heart, p.204-215

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Temporal epilepsy lesions may be detected by the voxel-based quantitative analysis of brain FDG-PET images using an original block-matching normalization software

Annals of nuclear medicine, 2016-05, Vol.30 (4), p.272-278

2016

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A Framework for Creating Population Specific Multimodal Brain Atlas Using Clinical T1 and Diffusion Tensor Images

Computational Diffusion MRI, p.99-108

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Detecting Symmetry in Ascidian Embryo

2024 IEEE International Symposium on Biomedical Imaging (ISBI), 2024, p.1-4

2024

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A stochastic framework to model axon interactions within growing neuronal populations

PLoS computational biology, 2018-12, Vol.14 (12), p.e1006627-e1006627

2018

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Iterative Closest Curve: A Framework for Curvilinear Structure Registration Application to 2D/3D Coronary Arteries Registration

Medical Image Computing and Computer-Assisted Intervention – MICCAI 2013, 2013, Vol.16 (Pt 1), p.179-186

2013

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Atlas-based delineation of lymph node levels in head and neck computed tomography images

Radiotherapy and oncology, 2008-05, Vol.87 (2), p.281-289

2008

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Dentalmaps: Automatic Dental Delineation for Radiotherapy Planning in Head-and-Neck Cancer

International journal of radiation oncology, biology, physics, 2012-04, Vol.82 (5), p.1858-1865

2012

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Robust Plant Cell Tracking in Fluorescence Microscopy 3D+T Series

In Toto Imaging and Reconstruction of Post-Implantation Mouse Development at the Single-Cell Level

A tree-topology preserving pairing for 3D/2D registration

Planar cell polarity genes frizzled4 and frizzled6 exert patterning influence on arterial vessel morphogenesis

Robust mosaicing with correction of motion distortions and tissue deformations for in vivo fibered microscopy

A three-dimensional histological atlas of the human basal ganglia. II. Atlas deformation strategy and evaluation in deep brain stimulation for Parkinson disease

Contact area–dependent cell communication and the morphological invariance of ascidian embryogenesis

3D Coronary Vessel Tree Tracking in X-Ray Projections

Assessing the ability of the 2D Fisher–KPP equation to model cell-sheet wound closure

A pre-clinical assessment of an atlas-based automatic segmentation tool for the head and neck

Model-Based Detection of Tubular Structures in 3D Images

Blockwise processing applied to brain microvascular network study

Coherent temporal extrapolation of labeled images

Imaging plant growth in 4D: robust tissue reconstruction and lineaging at cell resolution

Embryo-scale epithelial buckling forms a propagating furrow that initiates gastrulation

A multiscale analysis of early flower development in Arabidopsis provides an integrated view of molecular regulation and growth control

Intensity-based matching and registration for 3D correlative microscopy with large discrepancies

3D Coronary Vessel Tracking in X-Ray Projections

Temporal epilepsy lesions may be detected by the voxel-based quantitative analysis of brain FDG-PET images using an original block-matching normalization software

A Framework for Creating Population Specific Multimodal Brain Atlas Using Clinical T1 and Diffusion Tensor Images

Detecting Symmetry in Ascidian Embryo

A stochastic framework to model axon interactions within growing neuronal populations

Iterative Closest Curve: A Framework for Curvilinear Structure Registration Application to 2D/3D Coronary Arteries Registration

Atlas-based delineation of lymph node levels in head and neck computed tomography images

Dentalmaps: Automatic Dental Delineation for Radiotherapy Planning in Head-and-Neck Cancer

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