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The phenomenon of strain degeneration in biotechnologically relevant fungi

Applied microbiology and biotechnology, 2023-08, Vol.107 (15), p.4745-4758

2023

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In Vitro Characterization of a Nuclear Receptor-like Domain of the Xylanase Regulator 1 from Trichoderma reesei

Journal of fungi (Basel), 2022-11, Vol.8 (12), p.1254

2022

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FunOrder: A robust and semi-automated method for the identification of essential biosynthetic genes through computational molecular co-evolution

PLoS computational biology, 2021-09, Vol.17 (9), p.e1009372-e1009372

2021

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Novel approach in whole genome mining and transcriptome analysis reveal conserved RiPPs in Trichoderma spp

BMC genomics, 2020-03, Vol.21 (1), p.258-12, Article 258

2020

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Bi-directionalized promoter systems allow methanol-free production of hard-to-express peroxygenases with Komagataella Phaffii

Microbial cell factories, 2024-06, Vol.23 (1), p.177-14

2024

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Transformation System for Hypocrea jecorina (Trichoderma reesei) That Favors Homologous Integration and Employs Reusable Bidirectionally Selectable Markers

Applied and Environmental Microbiology, 2011-01, Vol.77 (1), p.114-121

2011

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Transcriptional Regulation of xyr1, Encoding the Main Regulator of the Xylanolytic and Cellulolytic Enzyme System in Hypocrea jecorina

Applied and Environmental Microbiology, 2008-11, Vol.74 (21), p.6554-6562

2008

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In Vivo Study of the Sorbicillinoid Gene Cluster in Trichoderma reesei

Frontiers in microbiology, 2017-10, Vol.8, p.2037-2037

2017

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Genomic deletions in Aureobasidium pullulans by an AMA1 plasmid for gRNA and CRISPR/Cas9 expression

Fungal biology and biotechnology, 2024-06, Vol.11 (1), p.6-10, Article 6

2024

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A bioinformatic-assisted workflow for genome-wide identification of ncRNAs

NAR genomics and bioinformatics, 2022-09, Vol.4 (3)

2022

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Identification and functional characterization of novel xylose transporters from the cell factories Aspergillus niger and Trichoderma reesei

Biotechnology for biofuels, 2016-07, Vol.9 (1), Article 148

2016

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An overview on current molecular tools for heterologous gene expression in Trichoderma

Fungal biology and biotechnology, 2021-10, Vol.8 (1), p.1-11, Article 11

2021

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Protein secretion and associated stress in industrially employed filamentous fungi

Applied microbiology and biotechnology, 2024-12, Vol.108 (1), p.92-92, Article 92

2024

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A current view on long noncoding RNAs in yeast and filamentous fungi

Applied microbiology and biotechnology, 2018-09, Vol.102 (17), p.7319-7331

2018

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The pentose phosphate pathway in industrially relevant fungi: crucial insights for bioprocessing

Applied microbiology and biotechnology, 2021-05, Vol.105 (10), p.4017-4031

2021

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d-Xylose Concentration-Dependent Hydrolase Expression Profiles and the Function of CreA and XlnR in Aspergillus niger

Applied and Environmental Microbiology, 2012-05, Vol.78 (9), p.3145-3155

2012

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Truncation of the transcriptional repressor protein Cre1 in Trichoderma reesei Rut-C30 turns it into an activator

Fungal biology and biotechnology, 2018-08, Vol.5 (1), p.15-18, Article 15

2018

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D-Xylose as a Repressor or Inducer of Xylanase Expression in Hypocrea jecorina (Trichoderma reesei)

Applied and Environmental Microbiology, 2010-03, Vol.76 (6), p.1770-1776

2010

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The Potential of Synthetic Biology for Trichoderma reesei

Methods in molecular biology (Clifton, N.J.), 2021, Vol.2234, p.45

2021

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FunOrder 2.0 – a method for the fully automated curation of co-evolved genes in fungal biosynthetic gene clusters

Frontiers in fungal biology, 2022-10, Vol.3, p.1020623-1020623

2022

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The Relation Between Promoter Chromatin Status, Xyr1 and Cellulase Expression in Trichoderma reesei

Current genomics, 2016-04, Vol.17 (2), p.145-152

2016

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Identification of the Main Regulator Responsible for Synthesis of the Typical Yellow Pigment Produced by Trichoderma reesei

Applied and environmental microbiology, 2016-10, Vol.82 (20), p.6247-6257

2016

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L-Arabitol Is the Actual Inducer of Xylanase Expression in Hypocrea jecorina (Trichoderma reesei)

Applied and Environmental Microbiology, 2011-09, Vol.77 (17), p.5988-5994

2011

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Evaluation of reference genes for transcript analyses in Komagataella phaffii (Pichia pastoris)

Fungal biology and biotechnology, 2023-03, Vol.10 (1), p.7-7, Article 7

2023

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Correction to: The pentose phosphate pathway in industrially relevant fungi: crucial insights for bioprocessing

Applied microbiology and biotechnology, 2021-12, Vol.105 (23), p.9017-9018

2021

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The phenomenon of strain degeneration in biotechnologically relevant fungi

In Vitro Characterization of a Nuclear Receptor-like Domain of the Xylanase Regulator 1 from Trichoderma reesei

FunOrder: A robust and semi-automated method for the identification of essential biosynthetic genes through computational molecular co-evolution

Novel approach in whole genome mining and transcriptome analysis reveal conserved RiPPs in Trichoderma spp

Bi-directionalized promoter systems allow methanol-free production of hard-to-express peroxygenases with Komagataella Phaffii

Transformation System for Hypocrea jecorina (Trichoderma reesei) That Favors Homologous Integration and Employs Reusable Bidirectionally Selectable Markers

Transcriptional Regulation of xyr1, Encoding the Main Regulator of the Xylanolytic and Cellulolytic Enzyme System in Hypocrea jecorina

In Vivo Study of the Sorbicillinoid Gene Cluster in Trichoderma reesei

Genomic deletions in Aureobasidium pullulans by an AMA1 plasmid for gRNA and CRISPR/Cas9 expression

A bioinformatic-assisted workflow for genome-wide identification of ncRNAs

Identification and functional characterization of novel xylose transporters from the cell factories Aspergillus niger and Trichoderma reesei

An overview on current molecular tools for heterologous gene expression in Trichoderma

Protein secretion and associated stress in industrially employed filamentous fungi

A current view on long noncoding RNAs in yeast and filamentous fungi

The pentose phosphate pathway in industrially relevant fungi: crucial insights for bioprocessing

d-Xylose Concentration-Dependent Hydrolase Expression Profiles and the Function of CreA and XlnR in Aspergillus niger

Truncation of the transcriptional repressor protein Cre1 in Trichoderma reesei Rut-C30 turns it into an activator

D-Xylose as a Repressor or Inducer of Xylanase Expression in Hypocrea jecorina (Trichoderma reesei)

The Potential of Synthetic Biology for Trichoderma reesei

FunOrder 2.0 – a method for the fully automated curation of co-evolved genes in fungal biosynthetic gene clusters

The Relation Between Promoter Chromatin Status, Xyr1 and Cellulase Expression in Trichoderma reesei

Identification of the Main Regulator Responsible for Synthesis of the Typical Yellow Pigment Produced by Trichoderma reesei

L-Arabitol Is the Actual Inducer of Xylanase Expression in Hypocrea jecorina (Trichoderma reesei)

Evaluation of reference genes for transcript analyses in Komagataella phaffii (Pichia pastoris)

Correction to: The pentose phosphate pathway in industrially relevant fungi: crucial insights for bioprocessing

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