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Protein Ensembles: How Does Nature Harness Thermodynamic Fluctuations for Life? The Diverse Functional Roles of Conformational Ensembles in the Cell

Chemical reviews, 2016-06, Vol.116 (11), p.6516-6551

2016

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Release of Cytochrome C from Bax Pores at the Mitochondrial Membrane

Scientific reports, 2017-06, Vol.7 (1), p.2635-13, Article 2635

2017

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Enzyme dynamics point to stepwise conformational selection in catalysis

Current opinion in chemical biology, 2010-10, Vol.14 (5), p.652-659

2010

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Principles and Overview of Sampling Methods for Modeling Macromolecular Structure and Dynamics

PLoS Computational Biology, 2016-04, Vol.12 (4), p.e1004619

2016

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Principles of Protein−Protein Interactions: What are the Preferred Ways For Proteins To Interact?

Chemical reviews, 2008-04, Vol.108 (4), p.1225-1244

2008

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Correlation of N-glycan dynamics and interaction network with allosteric antigen binding and Fc receptor recognition

Exploration of Immunology, 2021-04, Vol.1 (1), p.27-36

Ma, Buyong

2021

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Zinc ions promote Alzheimer Aβ aggregation via population shift of polymorphic states

Proceedings of the National Academy of Sciences - PNAS, 2010-05, Vol.107 (21), p.9490-9495

2010

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Selective Molecular Recognition in Amyloid Growth and Transmission and Cross-Species Barriers

Journal of molecular biology, 2012-08, Vol.421 (2-3), p.172-184

2012

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The Underappreciated Role of Allostery in the Cellular Network

Annual review of biophysics, 2013-01, Vol.42 (1), p.169-189

2013

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Antigen binding allosterically promotes Fc receptor recognition

mAbs, 2019-01, Vol.11 (1), p.58-74

2019

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Stabilities and Conformations of Alzheimer's β-Amyloid Peptide Oligomers (Aβ16-22, Aβ16-35, and Aβ10-35): Sequence Effects

Proceedings of the National Academy of Sciences - PNAS, 2002-10, Vol.99 (22), p.14126-14131

2002

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The Origin of Allosteric Functional Modulation: Multiple Pre-existing Pathways

Structure (London), 2009-08, Vol.17 (8), p.1042-1050

2009

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Mapping the Conformation Space of Wildtype and Mutant H-Ras with a Memetic, Cellular, and Multiscale Evolutionary Algorithm

PLoS computational biology, 2015-09, Vol.11 (9), p.e1004470

2015

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Data Mining Suggests That CXCL14 Gene Silencing in Colon Cancer Is Due to Promoter Methylation

International journal of molecular sciences, 2023-11, Vol.24 (22), p.16027

2023

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Druggable orthosteric and allosteric hot spots to target protein-protein interactions

Current pharmaceutical design, 2014, Vol.20 (8), p.1293-1301

2014

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Is allostery an intrinsic property of all dynamic proteins?

Proteins, structure, function, and bioinformatics, 2004-11, Vol.57 (3), p.433-443

2004

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Allosteric Effects of the Oncogenic RasQ61L Mutant on Raf-RBD

Structure (London), 2015-03, Vol.23 (3), p.505-516

2015

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Multiple conformational selection and induced fit events take place in allosteric propagation

Biophysical chemistry, 2014-02, Vol.186, p.22-30

2014

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Protein dynamics and conformational selection in bidirectional signal transduction

BMC biology, 2012-01, Vol.10 (1), p.2-2, Article 2

2012

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Hot Regions in Protein–Protein Interactions: The Organization and Contribution of Structurally Conserved Hot Spot Residues

Journal of molecular biology, 2005-02, Vol.345 (5), p.1281-1294

2005

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Conformational selection in amyloid-based immunotherapy: Survey of crystal structures of antibody-amyloid complexes

Biochimica et biophysica acta, 2016-11, Vol.1860 (11), p.2672-2681

2016

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Conformational Distribution and α‑Helix to β‑Sheet Transition of Human Amylin Fragment Dimer

Biomacromolecules, 2014-01, Vol.15 (1), p.122-131

2014

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Visualizing RNA conformational and architectural heterogeneity in solution

Nature communications, 2023-02, Vol.14 (1), p.714-714, Article 714

2023

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Promiscuous and specific recognition among ephrins and Eph receptors

Biochimica et biophysica acta. Proteins and proteomics, 2014-10, Vol.1844 (10), p.1729-1740

2014

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Protein Ensembles: How Does Nature Harness Thermodynamic Fluctuations for Life? The Diverse Functional Roles of Conformational Ensembles in the Cell

Release of Cytochrome C from Bax Pores at the Mitochondrial Membrane

Enzyme dynamics point to stepwise conformational selection in catalysis

Principles and Overview of Sampling Methods for Modeling Macromolecular Structure and Dynamics

Principles of Protein−Protein Interactions: What are the Preferred Ways For Proteins To Interact?

Correlation of N-glycan dynamics and interaction network with allosteric antigen binding and Fc receptor recognition

Zinc ions promote Alzheimer Aβ aggregation via population shift of polymorphic states

Selective Molecular Recognition in Amyloid Growth and Transmission and Cross-Species Barriers

Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer’s Disease, Parkinson’s Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis

The Underappreciated Role of Allostery in the Cellular Network

Antigen binding allosterically promotes Fc receptor recognition

Stabilities and Conformations of Alzheimer's β-Amyloid Peptide Oligomers (Aβ16-22, Aβ16-35, and Aβ10-35): Sequence Effects

The Origin of Allosteric Functional Modulation: Multiple Pre-existing Pathways

Mapping the Conformation Space of Wildtype and Mutant H-Ras with a Memetic, Cellular, and Multiscale Evolutionary Algorithm

Data Mining Suggests That CXCL14 Gene Silencing in Colon Cancer Is Due to Promoter Methylation

Druggable orthosteric and allosteric hot spots to target protein-protein interactions

Is allostery an intrinsic property of all dynamic proteins?

Allosteric Effects of the Oncogenic RasQ61L Mutant on Raf-RBD

Multiple conformational selection and induced fit events take place in allosteric propagation

Protein dynamics and conformational selection in bidirectional signal transduction

Hot Regions in Protein–Protein Interactions: The Organization and Contribution of Structurally Conserved Hot Spot Residues

Conformational selection in amyloid-based immunotherapy: Survey of crystal structures of antibody-amyloid complexes

Conformational Distribution and α‑Helix to β‑Sheet Transition of Human Amylin Fragment Dimer

Visualizing RNA conformational and architectural heterogeneity in solution

Promiscuous and specific recognition among ephrins and Eph receptors

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