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Cancer-Associated Protein Kinase C Mutations Reveal Kinase’s Role as Tumor Suppressor

Cell, 2015-01, Vol.160 (3), p.489-502

2015

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Oncogenic KRAS Regulates Tumor Cell Signaling via Stromal Reciprocation

Cell, 2016-05, Vol.165 (4), p.910-920

2016

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Tumorigenicity and genetic profiling of circulating tumor cells in small-cell lung cancer

Nature medicine, 2014-08, Vol.20 (8), p.897-903

2014

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The Histone Demethylase KDM1A Sustains the Oncogenic Potential of MLL-AF9 Leukemia Stem Cells

Cancer cell, 2012-04, Vol.21 (4), p.473-487

2012

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Simpleaffy: a BioConductor package for Affymetrix Quality Control and data analysis

Bioinformatics, 2005-09, Vol.21 (18), p.3683-3685

2005

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twoddpcr: an R/Bioconductor package and Shiny app for Droplet Digital PCR analysis

Bioinformatics (Oxford, England), 2017-09, Vol.33 (17), p.2743-2745

2017

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Publisher Correction: In silico prediction of housekeeping long intergenic non-coding RNAs reveals HKlincR1 as an essential player in lung cancer cell survival

Scientific reports, 2019-12, Vol.9 (1), p.20211-1, Article 20211

2019

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Traject3d allows label-free identification of distinct co-occurring phenotypes within 3D culture by live imaging

Nature communications, 2022-09, Vol.13 (1), p.5317-5317, Article 5317

2022

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Hybridization interactions between probesets in short oligo microarrays lead to spurious correlations

BMC bioinformatics, 2006-06, Vol.7 (1), p.276-276, Article 276

2006

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A comparison of massively parallel nucleotide sequencing with oligonucleotide microarrays for global transcription profiling

BMC genomics, 2010-05, Vol.11 (1), p.282-282, Article 282

2010

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The utility of MAS5 expression summary and detection call algorithms

BMC bioinformatics, 2007-07, Vol.8 (1), p.273-273, Article 273

2007

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A global non-coding RNA system modulates fission yeast protein levels in response to stress

Nature communications, 2014-05, Vol.5 (1), p.3947-3947, Article 3947

2014

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Investigation of radiosensitivity gene signatures in cancer cell lines

PloS one, 2014-01, Vol.9 (1), p.e86329-e86329

2014

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Eight-channel iTRAQ Enables Comparison of the Activity of Six Leukemogenic Tyrosine Kinases

Molecular & cellular proteomics, 2008-05, Vol.7 (5), p.853-863

2008

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Targeted genetic dependency screen facilitates identification of actionable mutations in FGFR4, MAP3K9, and PAK5 in lung cancer

Proceedings of the National Academy of Sciences - PNAS, 2013-07, Vol.110 (30), p.12426-12431

2013

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Discrepancies in cancer genomic sequencing highlight opportunities for driver mutation discovery

Cancer research (Chicago, Ill.), 2014-11, Vol.74 (22), p.6390-6396

2014

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A model of k -mer surprisal to quantify local sequence information content surrounding splice regions

PeerJ (San Francisco, CA), 2020-11, Vol.8, p.e10063-e10063, Article e10063

2020

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Epithelial and stromal microRNA signatures of columnar cell hyperplasia linking Let-7c to precancerous and cancerous breast cancer cell proliferation

PloS one, 2014-08, Vol.9 (8), p.e105099-e105099

2014

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The removal of multiplicative, systematic bias allows integration of breast cancer gene expression datasets - improving meta-analysis and prediction of prognosis

BMC medical genomics, 2008-09, Vol.1 (1), p.42-42, Article 42

2008

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Quantitative proteomics reveals posttranslational control as a regulatory factor in primary hematopoietic stem cells

Blood, 2006-06, Vol.107 (12), p.4687-4694

2006

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CXCR4 mediated chemotaxis is regulated by 5T4 oncofetal glycoprotein in mouse embryonic cells

PloS one, 2010-04, Vol.5 (4), p.e9982-e9982

2010

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Gastrointestinal differentiation marker Cytokeratin 20 is regulated by homeobox gene CDX1

Proceedings of the National Academy of Sciences - PNAS, 2009-02, Vol.106 (6), p.1936-1941

2009

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An integrated mass-spectrometry pipeline identifies novel protein coding-regions in the human genome

PloS one, 2010-01, Vol.5 (1), p.e8949-e8949

2010

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Using large-scale genomics data to identify driver mutations in lung cancer: methods and challenges

Pharmacogenomics, 2015-07, Vol.16 (10), p.1149-1160

2015

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Oncogenic KRAS Regulates Tumor Cell Signaling via Stromal Reciprocation

Cell, 2016-06, Vol.165 (7), p.1818-1818

2016

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Cancer-Associated Protein Kinase C Mutations Reveal Kinase’s Role as Tumor Suppressor

Oncogenic KRAS Regulates Tumor Cell Signaling via Stromal Reciprocation

Tumorigenicity and genetic profiling of circulating tumor cells in small-cell lung cancer

The Histone Demethylase KDM1A Sustains the Oncogenic Potential of MLL-AF9 Leukemia Stem Cells

Simpleaffy: a BioConductor package for Affymetrix Quality Control and data analysis

twoddpcr: an R/Bioconductor package and Shiny app for Droplet Digital PCR analysis

Publisher Correction: In silico prediction of housekeeping long intergenic non-coding RNAs reveals HKlincR1 as an essential player in lung cancer cell survival

Traject3d allows label-free identification of distinct co-occurring phenotypes within 3D culture by live imaging

Hybridization interactions between probesets in short oligo microarrays lead to spurious correlations

A comparison of massively parallel nucleotide sequencing with oligonucleotide microarrays for global transcription profiling

The utility of MAS5 expression summary and detection call algorithms

A global non-coding RNA system modulates fission yeast protein levels in response to stress

Investigation of radiosensitivity gene signatures in cancer cell lines

Eight-channel iTRAQ Enables Comparison of the Activity of Six Leukemogenic Tyrosine Kinases

Targeted genetic dependency screen facilitates identification of actionable mutations in FGFR4, MAP3K9, and PAK5 in lung cancer

Discrepancies in cancer genomic sequencing highlight opportunities for driver mutation discovery

A model of k -mer surprisal to quantify local sequence information content surrounding splice regions

Epithelial and stromal microRNA signatures of columnar cell hyperplasia linking Let-7c to precancerous and cancerous breast cancer cell proliferation

The removal of multiplicative, systematic bias allows integration of breast cancer gene expression datasets - improving meta-analysis and prediction of prognosis

Quantitative proteomics reveals posttranslational control as a regulatory factor in primary hematopoietic stem cells

CXCR4 mediated chemotaxis is regulated by 5T4 oncofetal glycoprotein in mouse embryonic cells

Gastrointestinal differentiation marker Cytokeratin 20 is regulated by homeobox gene CDX1

An integrated mass-spectrometry pipeline identifies novel protein coding-regions in the human genome

Using large-scale genomics data to identify driver mutations in lung cancer: methods and challenges

Oncogenic KRAS Regulates Tumor Cell Signaling via Stromal Reciprocation

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