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hybridSPAdes: an algorithm for hybrid assembly of short and long reads

Bioinformatics, 2016-04, Vol.32 (7), p.1009-1015

2016

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Cultivation of a human-associated TM7 phylotype reveals a reduced genome and epibiotic parasitic lifestyle

Proceedings of the National Academy of Sciences - PNAS, 2015-01, Vol.112 (1), p.244-249

2015

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Precision-guided antimicrobial peptide as a targeted modulator of human microbial ecology

Proceedings of the National Academy of Sciences - PNAS, 2015-06, Vol.112 (24), p.7569-7574

2015

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Acquisition and Adaptation of Ultra-small Parasitic Reduced Genome Bacteria to Mammalian Hosts

Cell reports (Cambridge), 2020-07, Vol.32 (3), p.107939-107939, Article 107939

2020

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Episymbiotic Saccharibacteria suppresses gingival inflammation and bone loss in mice through host bacterial modulation

Cell host & microbe, 2021-11, Vol.29 (11), p.1649-1662.e7

2021

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The well-coordinated linkage between acidogenicity and aciduricity via insoluble glucans on the surface of Streptococcus mutans

Scientific reports, 2015-12, Vol.5 (1), p.18015-18015, Article 18015

2015

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The saccharibacterium TM7x elicits differential responses across its host range

The ISME Journal, 2020-12, Vol.14 (12), p.3054-3067

2020

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Rapid evolution of decreased host susceptibility drives a stable relationship between ultrasmall parasite TM7x and its bacterial host

Proceedings of the National Academy of Sciences - PNAS, 2018-11, Vol.115 (48), p.12277-12282

2018

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The social structure of microbial community involved in colonization resistance

The ISME Journal, 2014-03, Vol.8 (3), p.564-574

2014

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Single virus genomics: a new tool for virus discovery

PloS one, 2011-03, Vol.6 (3), p.e17722-e17722

2011

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Rapamycin rejuvenates oral health in aging mice

eLife, 2020-04, Vol.9

2020

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Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum

Proceedings of the National Academy of Sciences - PNAS, 2013-06, Vol.110 (26), p.E2390-E2399

2013

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Quantification of Electron Transfer Rates to a Solid Phase Electron Acceptor through the Stages of Biofilm Formation from Single Cells to Multicellular Communities

Environmental science & technology, 2010-04, Vol.44 (7), p.2721-2727

2010

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Metagenome and Metatranscriptome Analyses Using Protein Family Profiles

PLoS computational biology, 2016-07, Vol.12 (7), p.e1004991-e1004991

2016

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Electrically Conductive Bacterial Nanowires Produced by Shewanella oneidensis Strain MR-1 and Other Microorganisms

Proceedings of the National Academy of Sciences - PNAS, 2006-07, Vol.103 (30), p.11358-11363

2006

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Colonization resistance is dispensable for segregation of oral and gut microbiota

BMC medical genomics, 2023-02, Vol.16 (1), p.31-31, Article 31

2023

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Familial clustering of dysbiotic oral and fecal microbiomes in juvenile dermatomyositis

Scientific reports, 2024-07, Vol.14 (1), p.16158-13, Article 16158

2024

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Meta-omics uncover temporal regulation of pathways across oral microbiome genera during in vitro sugar metabolism

The ISME Journal, 2015-12, Vol.9 (12), p.2605-2619

2015

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Phenotypic and Physiological Characterization of the Epibiotic Interaction Between TM7x and Its Basibiont Actinomyces

Microbial ecology, 2016-01, Vol.71 (1), p.243-255

2016

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Uncovering complex microbiome activities via metatranscriptomics during 24 hours of oral biofilm assembly and maturation

Microbiome, 2018-12, Vol.6 (1), p.217-217, Article 217

2018

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Quorum Sensing Modulates the Epibiotic-Parasitic Relationship Between Actinomyces odontolyticus and Its Saccharibacteria epibiont, a Nanosynbacter lyticus Strain, TM7x

Frontiers in microbiology, 2018-09, Vol.9, p.2049-2049

2018

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Modified SHI medium supports growth of a disease‐state subgingival polymicrobial community in vitro

Molecular oral microbiology, 2021-02, Vol.36 (1), p.37-49

2021

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Multi-cohort shotgun metagenomic analysis of oral and gut microbiota overlap in healthy adults

Scientific data, 2024-01, Vol.11 (1), p.75-75, Article 75

2024

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c-Type cytochrome-dependent formation of U(IV) nanoparticles by Shewanella oneidensis

PLoS biology, 2006-08, Vol.4 (9), p.e268

2006

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Ultrasmall epibiont Nanosynbacter lyticus strain TM7x and host bacteria transcriptional activity after initial host parasitism

Journal of oral microbiology, 2024, Vol.16 (1), p.2287349

2024

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hybridSPAdes: an algorithm for hybrid assembly of short and long reads

Cultivation of a human-associated TM7 phylotype reveals a reduced genome and epibiotic parasitic lifestyle

Precision-guided antimicrobial peptide as a targeted modulator of human microbial ecology

Acquisition and Adaptation of Ultra-small Parasitic Reduced Genome Bacteria to Mammalian Hosts

Episymbiotic Saccharibacteria suppresses gingival inflammation and bone loss in mice through host bacterial modulation

The well-coordinated linkage between acidogenicity and aciduricity via insoluble glucans on the surface of Streptococcus mutans

The saccharibacterium TM7x elicits differential responses across its host range

Rapid evolution of decreased host susceptibility drives a stable relationship between ultrasmall parasite TM7x and its bacterial host

The social structure of microbial community involved in colonization resistance

Single virus genomics: a new tool for virus discovery

Rapamycin rejuvenates oral health in aging mice

Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum

Quantification of Electron Transfer Rates to a Solid Phase Electron Acceptor through the Stages of Biofilm Formation from Single Cells to Multicellular Communities

Metagenome and Metatranscriptome Analyses Using Protein Family Profiles

Electrically Conductive Bacterial Nanowires Produced by Shewanella oneidensis Strain MR-1 and Other Microorganisms

Colonization resistance is dispensable for segregation of oral and gut microbiota

Familial clustering of dysbiotic oral and fecal microbiomes in juvenile dermatomyositis

Meta-omics uncover temporal regulation of pathways across oral microbiome genera during in vitro sugar metabolism

Phenotypic and Physiological Characterization of the Epibiotic Interaction Between TM7x and Its Basibiont Actinomyces

Uncovering complex microbiome activities via metatranscriptomics during 24 hours of oral biofilm assembly and maturation

Quorum Sensing Modulates the Epibiotic-Parasitic Relationship Between Actinomyces odontolyticus and Its Saccharibacteria epibiont, a Nanosynbacter lyticus Strain, TM7x

Modified SHI medium supports growth of a disease‐state subgingival polymicrobial community in vitro

Multi-cohort shotgun metagenomic analysis of oral and gut microbiota overlap in healthy adults

c-Type cytochrome-dependent formation of U(IV) nanoparticles by Shewanella oneidensis

Ultrasmall epibiont Nanosynbacter lyticus strain TM7x and host bacteria transcriptional activity after initial host parasitism

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