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Harvesting the promising fruits of genomics: applying genome sequencing technologies to crop breeding

PLoS biology, 2014-06, Vol.12 (6), p.e1001883-e1001883

2014

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Genomic selection and association mapping in rice (Oryza sativa): effect of trait genetic architecture, training population composition, marker number and statistical model on accuracy of rice genomic selection in elite, tropical rice breeding lines

PLoS genetics, 2015-02, Vol.11 (2), p.e1004982-e1004982

2015

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Genetic architecture of cold tolerance in rice (Oryza sativa) determined through high resolution genome-wide analysis

PloS one, 2017-03, Vol.12 (3), p.e0172133-e0172133

2017

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Genome-wide association mapping for yield and other agronomic traits in an elite breeding population of tropical rice (Oryza sativa)

PloS one, 2015-03, Vol.10 (3), p.e0119873-e0119873

2015

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Genetic architecture of aluminum tolerance in rice (Oryza sativa) determined through genome-wide association analysis and QTL mapping

PLoS genetics, 2011-08, Vol.7 (8), p.e1002221

2011

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An improved 7K SNP array, the C7AIR, provides a wealth of validated SNP markers for rice breeding and genetics studies

PloS one, 2020-05, Vol.15 (5), p.e0232479-e0232479

2020

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When more is better: how data sharing would accelerate genomic selection of crop plants

The New phytologist, 2016-12, Vol.212 (4), p.814-826

2016

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Open access resources for genome-wide association mapping in rice

Nature communications, 2016-02, Vol.7 (1), p.10532-10532, Article 10532

2016

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Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

Nature communications, 2011-09, Vol.2 (1), p.467-467, Article 467

2011

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Natural variation underlies alterations in Nramp aluminum transporter (NRAT1) expression and function that play a key role in rice aluminum tolerance

Proceedings of the National Academy of Sciences - PNAS, 2014-04, Vol.111 (17), p.6503-6508

2014

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Genomic Diversity and Introgression in O. sativa Reveal the Impact of Domestication and Breeding on the Rice Genome

PloS one, 2010-05, Vol.5 (5), p.e10780-e10780

2010

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An imputation platform to enhance integration of rice genetic resources

Nature communications, 2018-08, Vol.9 (1), p.3519-10, Article 3519

2018

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origin and evolution of fragrance in rice (Oryza sativa L.)

Proceedings of the National Academy of Sciences - PNAS, 2009-08, Vol.106 (34), p.14444-14449

2009

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Genomics of gene banks: A case study in rice

American journal of botany, 2012-02, Vol.99 (2), p.407-423

2012

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High‐throughput two‐dimensional root system phenotyping platform facilitates genetic analysis of root growth and development

Plant, cell and environment, 2013-02, Vol.36 (2), p.454-466

2013

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Correction: Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number and Statistical Model on Accuracy of Rice Genomic Selection in Elite, Tropical Rice Breeding Lines

PLoS genetics, 2015-06, Vol.11 (6), p.e1005350-e1005350

2015

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Genome-wide patterns of nucleotide polymorphism in domesticated rice

PLoS genetics, 2007-09, Vol.3 (9), p.1745-1756

2007

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rice bacterial blight resistance gene xa5 encodes a novel form of disease resistance

Molecular plant-microbe interactions, 2004-12, Vol.17 (12), p.1348-1354

2004

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The buffering capacity of stems: genetic architecture of nonstructural carbohydrates in cultivated Asian rice, Oryza sativa

The New phytologist, 2017-07, Vol.215 (2), p.658-671

2017

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Regulator of Awn Elongation 3 , an E3 ubiquitin ligase, is responsible for loss of awns during African rice domestication

Proceedings of the National Academy of Sciences - PNAS, 2023-01, Vol.120 (4), p.e2207105120-e2207105120

2023

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Natural variation of rice strigolactone biosynthesis is associated with the deletion of two MAX1 orthologs

Proceedings of the National Academy of Sciences - PNAS, 2014-02, Vol.111 (6), p.2379-2384

2014

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Bridging old and new: diversity and evaluation of high iron-associated stress response of rice cultivated in West Africa

Journal of experimental botany, 2020-07, Vol.71 (14), p.4188-4200

2020

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Genome wide association analysis of root hair traits in rice reveals novel genomic regions controlling epidermal cell differentiation

BMC plant biology, 2023-01, Vol.23 (1), p.6-6, Article 6

2023

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Global dissemination of a single mutation conferring white pericarp in rice

PLoS genetics, 2007-08, Vol.3 (8), p.e133-e133

2007

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Fine mapping of a grain-weight quantitative trait locus in the pericentromeric region of rice chromosome 3

Genetics (Austin), 2004-12, Vol.168 (4), p.2187-2195

2004

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Harvesting the promising fruits of genomics: applying genome sequencing technologies to crop breeding

Genomic selection and association mapping in rice (Oryza sativa): effect of trait genetic architecture, training population composition, marker number and statistical model on accuracy of rice genomic selection in elite, tropical rice breeding lines

Genetic architecture of cold tolerance in rice (Oryza sativa) determined through high resolution genome-wide analysis

Genome-wide association mapping for yield and other agronomic traits in an elite breeding population of tropical rice (Oryza sativa)

Genetic architecture of aluminum tolerance in rice (Oryza sativa) determined through genome-wide association analysis and QTL mapping

An improved 7K SNP array, the C7AIR, provides a wealth of validated SNP markers for rice breeding and genetics studies

When more is better: how data sharing would accelerate genomic selection of crop plants

Open access resources for genome-wide association mapping in rice

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

Natural variation underlies alterations in Nramp aluminum transporter (NRAT1) expression and function that play a key role in rice aluminum tolerance

Genomic Diversity and Introgression in O. sativa Reveal the Impact of Domestication and Breeding on the Rice Genome

An imputation platform to enhance integration of rice genetic resources

origin and evolution of fragrance in rice (Oryza sativa L.)

Genomics of gene banks: A case study in rice

High‐throughput two‐dimensional root system phenotyping platform facilitates genetic analysis of root growth and development

Correction: Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number and Statistical Model on Accuracy of Rice Genomic Selection in Elite, Tropical Rice Breeding Lines

Genome-wide patterns of nucleotide polymorphism in domesticated rice

rice bacterial blight resistance gene xa5 encodes a novel form of disease resistance

The buffering capacity of stems: genetic architecture of nonstructural carbohydrates in cultivated Asian rice, Oryza sativa

Regulator of Awn Elongation 3 , an E3 ubiquitin ligase, is responsible for loss of awns during African rice domestication

Natural variation of rice strigolactone biosynthesis is associated with the deletion of two MAX1 orthologs

Bridging old and new: diversity and evaluation of high iron-associated stress response of rice cultivated in West Africa

Genome wide association analysis of root hair traits in rice reveals novel genomic regions controlling epidermal cell differentiation

Global dissemination of a single mutation conferring white pericarp in rice

Fine mapping of a grain-weight quantitative trait locus in the pericentromeric region of rice chromosome 3

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