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Milestoning without a Reaction Coordinate

Journal of chemical theory and computation, 2010-06, Vol.6 (6), p.1805-1817

2010

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Gene essentiality and synthetic lethality in haploid human cells

Science (American Association for the Advancement of Science), 2015-11, Vol.350 (6264), p.1092-1096

2015

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Genome-Wide Mutation Scoring for Machine-Learning-Based Antimicrobial Resistance Prediction

International journal of molecular sciences, 2021-12, Vol.22 (23), p.13049

2021

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Early-onset inflammatory bowel disease and common variable immunodeficiency–like disease caused by IL-21 deficiency

Journal of allergy and clinical immunology, 2014-06, Vol.133 (6), p.1651-1659.e12

2014

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A coarse-grained potential for fold recognition and molecular dynamics simulations of proteins

Proteins, structure, function, and bioinformatics, 2009-09, Vol.76 (4), p.822-836

2009

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Allosteric transitions of supramolecular systems explored by network models: application to chaperonin GroEL

PLoS computational biology, 2009-04, Vol.5 (4), p.e1000360-e1000360

2009

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Systematic characterization of BAF mutations provides insights into intracomplex synthetic lethalities in human cancers

Nature genetics, 2019-09, Vol.51 (9), p.1399-1410

2019

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Complement Activation in Peritoneal Dialysis-Induced Arteriolopathy

Journal of the American Society of Nephrology, 2018-01, Vol.29 (1), p.268-282

2018

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Learning From Limited Data: Towards Best Practice Techniques for Antimicrobial Resistance Prediction From Whole Genome Sequencing Data

Frontiers in cellular and infection microbiology, 2021-02, Vol.11, p.610348-610348

2021

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Metagenomic Antimicrobial Susceptibility Testing from Simulated Native Patient Samples

Antibiotics (Basel), 2023-02, Vol.12 (2), p.366

2023

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Effects of Alanyl-Glutamine Treatment on the Peritoneal Dialysis Effluent Proteome Reveal Pathomechanism-Associated Molecular Signatures

Molecular & cellular proteomics, 2018-03, Vol.17 (3), p.516-532

2018

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Automated antimicrobial susceptibility testing and antimicrobial resistance genotyping using Illumina and Oxford Nanopore Technologies sequencing data among Enterobacteriaceae

Frontiers in microbiology, 2022-08, Vol.13, p.973605-973605

2022

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FASIL-MS: An Integrated Proteomic and Bioinformatic Workflow To Universally Quantitate In Vivo-Acetylated Positional Isomers

Journal of proteome research, 2016-08, Vol.15 (8), p.2579-2594

2016

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Type I Interferon Signaling Disrupts the Hepatic Urea Cycle and Alters Systemic Metabolism to Suppress T Cell Function

Immunity (Cambridge, Mass.), 2019-12, Vol.51 (6), p.1074-1087.e9

2019

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Characterization of host proteins interacting with the lymphocytic choriomeningitis virus L protein

PLoS pathogens, 2017-12, Vol.13 (12), p.e1006758-e1006758

2017

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Experiments and Comprehensive Simulations of the Formation of a Helical Turn

The journal of physical chemistry. B, 2012-06, Vol.116 (23), p.6598-6610

2012

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Identifying Kinase Substrates via a Heavy ATP Kinase Assay and Quantitative Mass Spectrometry

Scientific reports, 2016-06, Vol.6 (1), p.28107-28107, Article 28107

2016

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High-throughput drug screening identifies the ATR-CHK1 pathway as a therapeutic vulnerability of CALR mutated hematopoietic cells

Blood cancer journal (New York), 2021-07, Vol.11 (7), p.137-137, Article 137

2021

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Mapping the Human Kinome in Response to DNA Damage

Cell reports (Cambridge), 2019-01, Vol.26 (3), p.555-563.e6

2019

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Building and exploring an integrated human kinase network: Global organization and medical entry points

Journal of proteomics, 2014-07, Vol.107 (100), p.113-127

2014

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Mass spectrometric analysis of synaptosomal membrane preparations for the determination of brain receptors, transporters and channels

Proteomics (Weinheim), 2016-11, Vol.16 (22), p.2911-2920

2016

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Building and assessing atomic models of proteins from structural templates: Learning and benchmarks

Proteins, structure, function, and bioinformatics, 2009-09, Vol.76 (4), p.930-945

2009

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Milestoning without a Reaction Coordinate

Gene essentiality and synthetic lethality in haploid human cells

Genome-Wide Mutation Scoring for Machine-Learning-Based Antimicrobial Resistance Prediction

Early-onset inflammatory bowel disease and common variable immunodeficiency–like disease caused by IL-21 deficiency

A coarse-grained potential for fold recognition and molecular dynamics simulations of proteins

Allosteric transitions of supramolecular systems explored by network models: application to chaperonin GroEL

Systematic characterization of BAF mutations provides insights into intracomplex synthetic lethalities in human cancers

Complement Activation in Peritoneal Dialysis-Induced Arteriolopathy

Artemisinins Target GABA A Receptor Signaling and Impair α Cell Identity

Learning From Limited Data: Towards Best Practice Techniques for Antimicrobial Resistance Prediction From Whole Genome Sequencing Data

Metagenomic Antimicrobial Susceptibility Testing from Simulated Native Patient Samples

Effects of Alanyl-Glutamine Treatment on the Peritoneal Dialysis Effluent Proteome Reveal Pathomechanism-Associated Molecular Signatures

Automated antimicrobial susceptibility testing and antimicrobial resistance genotyping using Illumina and Oxford Nanopore Technologies sequencing data among Enterobacteriaceae

FASIL-MS: An Integrated Proteomic and Bioinformatic Workflow To Universally Quantitate In Vivo-Acetylated Positional Isomers

Type I Interferon Signaling Disrupts the Hepatic Urea Cycle and Alters Systemic Metabolism to Suppress T Cell Function

24-Norursodeoxycholic acid reshapes immunometabolism in CD8+ T cells and alleviates hepatic inflammation

MTHFD1 interaction with BRD4 links folate metabolism to transcriptional regulation

Characterization of host proteins interacting with the lymphocytic choriomeningitis virus L protein

Experiments and Comprehensive Simulations of the Formation of a Helical Turn

Identifying Kinase Substrates via a Heavy ATP Kinase Assay and Quantitative Mass Spectrometry

High-throughput drug screening identifies the ATR-CHK1 pathway as a therapeutic vulnerability of CALR mutated hematopoietic cells

Mapping the Human Kinome in Response to DNA Damage

Building and exploring an integrated human kinase network: Global organization and medical entry points

Mass spectrometric analysis of synaptosomal membrane preparations for the determination of brain receptors, transporters and channels

Building and assessing atomic models of proteins from structural templates: Learning and benchmarks

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