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Identification of candidate novel production variants on the Bos taurus chromosome X

Journal of dairy science, 2023-11, Vol.106 (11), p.7799-7815

2023

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The evolving role of Fourier-transform mid-infrared spectroscopy in genetic improvement of dairy cattle

Journal of animal science and biotechnology, 2020-04, Vol.11 (1), p.39-39, Article 39

2020

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Leveraging genetically simple traits to identify small-effect variants for complex phenotypes

BMC genomics, 2016-11, Vol.17 (1), p.858-858, Article 858

2016

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Short communication: Identification of the pseudoautosomal region in the Hereford bovine reference genome assembly ARS-UCD1.2

Journal of dairy science, 2019-04, Vol.102 (4), p.3254-3258

2019

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Bovine mammary gland X chromosome inactivation

Journal of dairy science, 2017-07, Vol.100 (7), p.5491-5500

2017

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The evolving role of Fourier-transform mid-infrared spectroscopy in geneticimprovement of dairy cattle

畜牧与生物技术杂志（英文版）, 2020, Vol.11 (3), p.626-638

2020

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Using QTL to Identify Genes and Pathways Underlying the Regulation and Production of Milk Components in Cattle

Animals (Basel), 2023-03, Vol.13 (5), p.911

Lopdell, Thomas John

2023

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Genetic variation in histone modifications and gene expression identifies regulatory variants in the mammary gland of cattle

BMC genomics, 2022-12, Vol.23 (1), p.815-815, Article 815

2022

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A new mechanism for a familiar mutation - bovine DGAT1 K232A modulates gene expression through multi-junction exon splice enhancement

BMC genomics, 2020-08, Vol.21 (1), p.591-591, Article 591

2020

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Allele-specific binding variants causing ChIP-seq peak height of histone modification are not enriched in expression QTL annotations

Genetics selection evolution (Paris), 2024-06, Vol.56 (1), p.50-11, Article 50

2024

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Comparison of the genetic characteristics of directly measured and Fourier-transform mid-infrared-predicted bovine milk fatty acids and proteins

Journal of dairy science, 2022-12, Vol.105 (12), p.9763-9791

2022

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DNA and RNA-sequence based GWAS highlights membrane-transport genes as key modulators of milk lactose content

BMC genomics, 2017-12, Vol.18 (1), p.968-968, Article 968

2017

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HandyCNV: Standardized Summary, Annotation, Comparison, and Visualization of Copy Number Variant, Copy Number Variation Region, and Runs of Homozygosity

Frontiers in genetics, 2021-09, Vol.12, p.731355-731355

2021

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A common regulatory haplotype doubles lactoferrin concentration in milk

Genetics selection evolution (Paris), 2024-03, Vol.56 (1), p.22-18, Article 22

2024

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Sequence-based genome-wide association study of individual milk mid-infrared wavenumbers in mixed-breed dairy cattle

Genetics selection evolution (Paris), 2021-07, Vol.53 (1), p.62-62, Article 62

2021

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Genome-wide association analysis reveals QTL and candidate mutations involved in white spotting in cattle

Genetics selection evolution (Paris), 2019-11, Vol.51 (1), p.62-62, Article 62

2019

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Non-additive association analysis using proxy phenotypes identifies novel cattle syndromes

Nature genetics, 2021-07, Vol.53 (7), p.949-954

2021

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Screening for phenotypic outliers identifies an unusually low concentration of a β-lactoglobulin B protein isoform in bovine milk caused by a synonymous SNP

Genetics selection evolution (Paris), 2022-03, Vol.54 (1), p.22-22, Article 22

2022

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Multiple QTL underlie milk phenotypes at the CSF2RB locus

Genetics selection evolution (Paris), 2019-01, Vol.51 (1), p.3-3, Article 3

2019

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Widespread cis -regulation of RNA editing in a large mammal

RNA (Cambridge), 2019-03, Vol.25 (3), p.319-335

2019

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Development of SpCas9-expressing bovine mammary epithelial cell lines

In vitro cellular & developmental biology. Animal, 2023-03, Vol.59 (3), p.163-165

2023

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Expression variants of the lipogenic AGPAT6 gene affect diverse milk composition phenotypes in Bos taurus

PloS one, 2014-01, Vol.9 (1), p.e85757-e85757

2014

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Non-additive QTL mapping of lactation traits in 124,000 cattle reveals novel recessive loci

Genetics selection evolution (Paris), 2022-01, Vol.54 (1), p.5-5, Article 5

2022

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Functionally reciprocal mutations of the prolactin signalling pathway define hairy and slick cattle

Nature communications, 2014-12, Vol.5 (1), p.5861-5861, Article 5861

2014

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Sequence-based Association Analysis Reveals an MGST1 eQTL with Pleiotropic Effects on Bovine Milk Composition

Scientific reports, 2016-05, Vol.6 (1), p.25376-25376, Article 25376

2016

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Identification of candidate novel production variants on the Bos taurus chromosome X

The evolving role of Fourier-transform mid-infrared spectroscopy in genetic improvement of dairy cattle

Leveraging genetically simple traits to identify small-effect variants for complex phenotypes

Short communication: Identification of the pseudoautosomal region in the Hereford bovine reference genome assembly ARS-UCD1.2

Bovine mammary gland X chromosome inactivation

The evolving role of Fourier-transform mid-infrared spectroscopy in geneticimprovement of dairy cattle

Using QTL to Identify Genes and Pathways Underlying the Regulation and Production of Milk Components in Cattle

Genetic variation in histone modifications and gene expression identifies regulatory variants in the mammary gland of cattle

A new mechanism for a familiar mutation - bovine DGAT1 K232A modulates gene expression through multi-junction exon splice enhancement

Allele-specific binding variants causing ChIP-seq peak height of histone modification are not enriched in expression QTL annotations

Comparison of the genetic characteristics of directly measured and Fourier-transform mid-infrared-predicted bovine milk fatty acids and proteins

DNA and RNA-sequence based GWAS highlights membrane-transport genes as key modulators of milk lactose content

HandyCNV: Standardized Summary, Annotation, Comparison, and Visualization of Copy Number Variant, Copy Number Variation Region, and Runs of Homozygosity

A common regulatory haplotype doubles lactoferrin concentration in milk

Sequence-based genome-wide association study of individual milk mid-infrared wavenumbers in mixed-breed dairy cattle

Genome-wide association analysis reveals QTL and candidate mutations involved in white spotting in cattle

Non-additive association analysis using proxy phenotypes identifies novel cattle syndromes

Screening for phenotypic outliers identifies an unusually low concentration of a β-lactoglobulin B protein isoform in bovine milk caused by a synonymous SNP

Multiple QTL underlie milk phenotypes at the CSF2RB locus

Widespread cis -regulation of RNA editing in a large mammal

Development of SpCas9-expressing bovine mammary epithelial cell lines

Expression variants of the lipogenic AGPAT6 gene affect diverse milk composition phenotypes in Bos taurus

Non-additive QTL mapping of lactation traits in 124,000 cattle reveals novel recessive loci

Functionally reciprocal mutations of the prolactin signalling pathway define hairy and slick cattle

Sequence-based Association Analysis Reveals an MGST1 eQTL with Pleiotropic Effects on Bovine Milk Composition

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