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Switchgrass genomic diversity, ploidy, and evolution: novel insights from a network-based SNP discovery protocol

PLoS genetics, 2013-01, Vol.9 (1), p.e1003215-e1003215

2013

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GAPIT: genome association and prediction integrated tool

Bioinformatics, 2012-09, Vol.28 (18), p.2397-2399

2012

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Evaluation of RR‐BLUP Genomic Selection Models that Incorporate Peak Genome‐Wide Association Study Signals in Maize and Sorghum

The plant genome, 2019-03, Vol.12 (1), p.1-14

2019

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simplePHENOTYPES: SIMulation of pleiotropic, linked and epistatic phenotypes

BMC bioinformatics, 2020-10, Vol.21 (1), p.1-491, Article 491

2020

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polyRAD: Genotype Calling with Uncertainty from Sequencing Data in Polyploids and Diploids

G3 : genes - genomes - genetics, 2019-03, Vol.9 (3), p.663-673

2019

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GAPIT Version 2: An Enhanced Integrated Tool for Genomic Association and Prediction

The plant genome, 2016-07, Vol.9 (2), p.1-9

2016

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Accelerating the switchgrass (Panicum virgatum L.) breeding cycle using genomic selection approaches

PloS one, 2014-11, Vol.9 (11), p.e112227-e112227

2014

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Lessons from Dwarf8 on the strengths and weaknesses of structured association mapping

PLoS genetics, 2013-02, Vol.9 (2), p.e1003246-e1003246

2013

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From association to prediction: statistical methods for the dissection and selection of complex traits in plants

Current opinion in plant biology, 2015-04, Vol.24, p.110-118

2015

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A foundation for provitamin A biofortification of maize: genome-wide association and genomic prediction models of carotenoid levels

Genetics (Austin), 2014-12, Vol.198 (4), p.1699-1716

2014

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Regularized multi-trait multi-locus linear mixed models for genome-wide association studies and genomic selection in crops

BMC bioinformatics, 2023-10, Vol.24 (1), p.1-399, Article 399

2023

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Characterization of Biosynthetic Pathways for the Production of the Volatile Homoterpenes DMNT and TMTT in Zea mays

The Plant cell, 2016-10, Vol.28 (10), p.2651-2665

2016

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Healthy Planet, Healthy Youth: A Food Systems Education and Promotion Intervention to Improve Adolescent Diet Quality and Reduce Food Waste

Nutrients, 2019-08, Vol.11 (8), p.1869

2019

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Genetic Architecture of Soybean Yield and Agronomic Traits

G3 : genes - genomes - genetics, 2018-10, Vol.8 (10), p.3367-3375

2018

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Exploration of Life-Course Factors Influencing Phenotypic Outcomes in Crops

Plant and cell physiology, 2020-08, Vol.61 (8), p.1381-1383

2020

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A population-level statistic for assessing Mendelian behavior of genotyping-by-sequencing data from highly duplicated genomes

BMC bioinformatics, 2022-03, Vol.23 (1), p.101-101, Article 101

2022

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Inhibition of ethylene involved in resistance to E. turcicum in an exotic-derived double haploid maize population

Frontiers in plant science, 2023-10, Vol.14, p.1272951-1272951

2023

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The regulatory landscape of early maize inflorescence development

Genome Biology, 2020-07, Vol.21 (1), p.165-165, Article 165

2020

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Reductions in leaf area index, pod production, seed size, and harvest index drive yield loss to high temperatures in soybean

Journal of experimental botany, 2023-03, Vol.74 (5), p.1629-1641

2023

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An Assessment of the Factors Influencing the Prediction Accuracy of Genomic Prediction Models Across Multiple Environments

Frontiers in genetics, 2021-07, Vol.12, p.689319-689319

2021

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A first look at the ability to use genomic prediction for improving the ratooning ability of sugarcane

Frontiers in plant science, 2023-08, Vol.14, p.1205999-1205999

2023

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Crop modeling suggests limited transpiration would increase yield of sorghum across drought-prone regions of the United States

Frontiers in plant science, 2024-01, Vol.14, p.1283339-1283339

2024

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mGWAS Uncovers Gln-Glucosinolate Seed-Specific Interaction and its Role in Metabolic Homeostasis

Plant physiology (Bethesda), 2020-06, Vol.183 (2), p.483-500

2020

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Genomic Prediction of Single Crosses in the Early Stages of a Maize Hybrid Breeding Pipeline

G3 : genes - genomes - genetics, 2016-11, Vol.6 (11), p.3443-3453

2016

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Genetic variation associated with PPO-inhibiting herbicide tolerance in sorghum

PloS one, 2020-10, Vol.15 (10), p.e0233254-e0233254

2020

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Switchgrass genomic diversity, ploidy, and evolution: novel insights from a network-based SNP discovery protocol

GAPIT: genome association and prediction integrated tool

Evaluation of RR‐BLUP Genomic Selection Models that Incorporate Peak Genome‐Wide Association Study Signals in Maize and Sorghum

simplePHENOTYPES: SIMulation of pleiotropic, linked and epistatic phenotypes

polyRAD: Genotype Calling with Uncertainty from Sequencing Data in Polyploids and Diploids

GAPIT Version 2: An Enhanced Integrated Tool for Genomic Association and Prediction

Accelerating the switchgrass (Panicum virgatum L.) breeding cycle using genomic selection approaches

Lessons from Dwarf8 on the strengths and weaknesses of structured association mapping

From association to prediction: statistical methods for the dissection and selection of complex traits in plants

A foundation for provitamin A biofortification of maize: genome-wide association and genomic prediction models of carotenoid levels

Regularized multi-trait multi-locus linear mixed models for genome-wide association studies and genomic selection in crops

Characterization of Biosynthetic Pathways for the Production of the Volatile Homoterpenes DMNT and TMTT in Zea mays

Healthy Planet, Healthy Youth: A Food Systems Education and Promotion Intervention to Improve Adolescent Diet Quality and Reduce Food Waste

Genetic Architecture of Soybean Yield and Agronomic Traits

Exploration of Life-Course Factors Influencing Phenotypic Outcomes in Crops

A population-level statistic for assessing Mendelian behavior of genotyping-by-sequencing data from highly duplicated genomes

Inhibition of ethylene involved in resistance to E. turcicum in an exotic-derived double haploid maize population

The regulatory landscape of early maize inflorescence development

Reductions in leaf area index, pod production, seed size, and harvest index drive yield loss to high temperatures in soybean

An Assessment of the Factors Influencing the Prediction Accuracy of Genomic Prediction Models Across Multiple Environments

A first look at the ability to use genomic prediction for improving the ratooning ability of sugarcane

Crop modeling suggests limited transpiration would increase yield of sorghum across drought-prone regions of the United States

mGWAS Uncovers Gln-Glucosinolate Seed-Specific Interaction and its Role in Metabolic Homeostasis

Genomic Prediction of Single Crosses in the Early Stages of a Maize Hybrid Breeding Pipeline

Genetic variation associated with PPO-inhibiting herbicide tolerance in sorghum

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