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iSNO-PseAAC: predict cysteine S-nitrosylation sites in proteins by incorporating position specific amino acid propensity into pseudo amino acid composition

PloS one, 2013-02, Vol.8 (2), p.e55844-e55844

2013

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iNitro-Tyr: prediction of nitrotyrosine sites in proteins with general pseudo amino acid composition

PloS one, 2014-08, Vol.9 (8), p.e105018-e105018

2014

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Identifying phenotype-associated subpopulations by integrating bulk and single-cell sequencing data

Nature biotechnology, 2022-04, Vol.40 (4), p.527-538

2022

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iSulf-Cys: Prediction of S-sulfenylation Sites in Proteins with Physicochemical Properties of Amino Acids

PloS one, 2016-04, Vol.11 (4), p.e0154237-e0154237

2016

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Aucubin alleviates oxidative stress and inflammation via Nrf2-mediated signaling activity in experimental traumatic brain injury

Journal of neuroinflammation, 2020-06, Vol.17 (1), p.188-188, Article 188

2020

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PathExpSurv: pathway expansion for explainable survival analysis and disease gene discovery

BMC bioinformatics, 2023-11, Vol.24 (1), p.434-434, Article 434

2023

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Framework and algorithms for identifying honest blocks in blockchain

PloS one, 2020-01, Vol.15 (1), p.e0227531-e0227531

2020

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Somatic mutations in SF3B1 aberrant‐negative MDS‐RS most commonly involved in TP53 genes

Journal of cellular and molecular medicine, 2022-06, Vol.26 (12), p.3586-3589

2022

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SIRT1 Promotes M2 Microglia Polarization via Reducing ROS-Mediated NLRP3 Inflammasome Signaling After Subarachnoid Hemorrhage

Frontiers in immunology, 2021-11, Vol.12, p.770744-770744

2021

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Incorporating network diffusion and peak location information for better single-cell ATAC-seq data analysis

Briefings in bioinformatics, 2024-01, Vol.25 (2)

2024

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iSNO-AAPair: incorporating amino acid pairwise coupling into PseAAC for predicting cysteine S-nitrosylation sites in proteins

PeerJ (San Francisco, CA), 2013-10, Vol.1, p.e171-e171

2013

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Discovery of co-occurring driver pathways in cancer

BMC bioinformatics, 2014-08, Vol.15 (1), p.271-271, Article 271

2014

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Exploration of the role of gene mutations in myelodysplastic syndromes through a sequencing design involving a small number of target genes

Scientific reports, 2017-02, Vol.7 (1), p.43113-43113, Article 43113

2017

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DHEA Attenuates Microglial Activation via Induction of JMJD3 in Experimental Subarachnoid Haemorrhage

Journal of neuroinflammation, 2019-11, Vol.16 (1), p.243-243, Article 243

2019

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Peroxiredoxin 2 activates microglia by interacting with Toll-like receptor 4 after subarachnoid hemorrhage

Journal of neuroinflammation, 2018-03, Vol.15 (1), p.87-87, Article 87

2018

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TP53 mutations predict decitabine‐induced complete responses in patients with myelodysplastic syndromes

British journal of haematology, 2017-02, Vol.176 (4), p.600-608

2017

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Reproductive strategies of animal‐pollinated plants on high mountains: A review of studies from the “Third Pole”

Journal of systematics and evolution : JSE, 2021-11, Vol.59 (6), p.1159-1169

2021

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Resveratrol Attenuates Acute Inflammatory Injury in Experimental Subarachnoid Hemorrhage in Rats via Inhibition of TLR4 Pathway

International journal of molecular sciences, 2016-08, Vol.17 (8), p.1331-1331

2016

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Recombinant milk fat globule-EGF factor-8 reduces apoptosis via integrin β3/FAK/PI3K/AKT signaling pathway in rats after traumatic brain injury

Cell death & disease, 2018-08, Vol.9 (9), p.845-17, Article 845

2018

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iSuc-PseAAC: predicting lysine succinylation in proteins by incorporating peptide position-specific propensity

Scientific reports, 2015-06, Vol.5 (1), p.10184-10184, Article 10184

2015

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Transitions from distyly to homostyly are associated with floral evolution in the buckwheat genus (Fagopyrum)

American journal of botany, 2017-08, Vol.104 (8), p.1232-1240

2017

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A genetic development route analysis on MDS subset carrying initial epigenetic gene mutations

Scientific reports, 2020-01, Vol.10 (1), p.826-826, Article 826

2020

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Resolvin D1 Attenuates Innate Immune Reactions in Experimental Subarachnoid Hemorrhage Rat Model

Molecular neurobiology, 2021-05, Vol.58 (5), p.1963-1977

2021

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Osteopontin attenuates early brain injury through regulating autophagy‐apoptosis interaction after subarachnoid hemorrhage in rats

CNS neuroscience & therapeutics, 2019-10, Vol.25 (10), p.1162-1172

2019

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Heterostyly promotes compatible pollination in buckwheats: Comparisons of intraflower, intraplant, and interplant pollen flow in distylous and homostylous Fagopyrum

American journal of botany, 2018-01, Vol.105 (1), p.108-116

2018

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iSNO-PseAAC: predict cysteine S-nitrosylation sites in proteins by incorporating position specific amino acid propensity into pseudo amino acid composition

iNitro-Tyr: prediction of nitrotyrosine sites in proteins with general pseudo amino acid composition

Identifying phenotype-associated subpopulations by integrating bulk and single-cell sequencing data

iSulf-Cys: Prediction of S-sulfenylation Sites in Proteins with Physicochemical Properties of Amino Acids

Aucubin alleviates oxidative stress and inflammation via Nrf2-mediated signaling activity in experimental traumatic brain injury

PathExpSurv: pathway expansion for explainable survival analysis and disease gene discovery

Framework and algorithms for identifying honest blocks in blockchain

Somatic mutations in SF3B1 aberrant‐negative MDS‐RS most commonly involved in TP53 genes

SIRT1 Promotes M2 Microglia Polarization via Reducing ROS-Mediated NLRP3 Inflammasome Signaling After Subarachnoid Hemorrhage

Incorporating network diffusion and peak location information for better single-cell ATAC-seq data analysis

iSNO-AAPair: incorporating amino acid pairwise coupling into PseAAC for predicting cysteine S-nitrosylation sites in proteins

Discovery of co-occurring driver pathways in cancer

Exploration of the role of gene mutations in myelodysplastic syndromes through a sequencing design involving a small number of target genes

DHEA Attenuates Microglial Activation via Induction of JMJD3 in Experimental Subarachnoid Haemorrhage

Peroxiredoxin 2 activates microglia by interacting with Toll-like receptor 4 after subarachnoid hemorrhage

TP53 mutations predict decitabine‐induced complete responses in patients with myelodysplastic syndromes

Reproductive strategies of animal‐pollinated plants on high mountains: A review of studies from the “Third Pole”

Resveratrol Attenuates Acute Inflammatory Injury in Experimental Subarachnoid Hemorrhage in Rats via Inhibition of TLR4 Pathway

Recombinant milk fat globule-EGF factor-8 reduces apoptosis via integrin β3/FAK/PI3K/AKT signaling pathway in rats after traumatic brain injury

iSuc-PseAAC: predicting lysine succinylation in proteins by incorporating peptide position-specific propensity

Transitions from distyly to homostyly are associated with floral evolution in the buckwheat genus (Fagopyrum)

A genetic development route analysis on MDS subset carrying initial epigenetic gene mutations

Resolvin D1 Attenuates Innate Immune Reactions in Experimental Subarachnoid Hemorrhage Rat Model

Osteopontin attenuates early brain injury through regulating autophagy‐apoptosis interaction after subarachnoid hemorrhage in rats

Heterostyly promotes compatible pollination in buckwheats: Comparisons of intraflower, intraplant, and interplant pollen flow in distylous and homostylous Fagopyrum

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