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HiCRep.py: fast comparison of Hi-C contact matrices in Python

Bioinformatics (Oxford, England), 2021-09, Vol.37 (18), p.2996-2997

2021

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Local chromatin fiber folding represses transcription and loop extrusion in quiescent cells

eLife, 2021-11, Vol.10

2021

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Generalized and efficient algorithm for computing multipole energies and gradients based on Cartesian tensors

The Journal of chemical physics, 2015-09, Vol.143 (11), p.114115-114115

Lin, Dejun

2015

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Thermodynamics of Micelle Formation and Membrane Fusion Modulate Antimicrobial Lipopeptide Activity

Biophysical journal, 2015-08, Vol.109 (4), p.750-759

2015

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Single-cell mRNA quantification and differential analysis with Census

Nature methods, 2017-03, Vol.14 (3), p.309-315

2017

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Thermodynamics of Antimicrobial Lipopeptide Binding to Membranes: Origins of Affinity and Selectivity

Biophysical journal, 2014-10, Vol.107 (8), p.1862-1872

2014

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Unsupervised embedding of single-cell Hi-C data

Bioinformatics, 2018-07, Vol.34 (13), p.i96-i104

2018

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Thermodynamics Govern the Mechanism of Antimicrobial Lipopeptides: Insights from Coarse-Grained Molecular Dynamics Simulations

Biophysical journal, 2015-01, Vol.108 (2), p.549a-549a

2015

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A High Performance Cobalt-Doped ZnO Visible Light Photocatalyst and Its Photogenerated Charge Transfer Properties

Nano research, 2011-11, Vol.4 (11), p.1144-1152

2011

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Investigation of the Mechanism of Antimicrobial Lipopeptides using Coarse-Grained Molecular Dynamics Simulations

Biophysical journal, 2014-01, Vol.106 (2), p.89a-89a

2014

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The 4D nucleome project

Nature (London), 2017-09, Vol.549 (7671), p.219-226

2017

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Computational methods for analyzing and modeling genome structure and organization

Wiley interdisciplinary reviews. Mechanisms of disease, 2019-01, Vol.11 (1), p.e1435-n/a

2019

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Estimating the Free Energy to Bind a Potent Antimicrobial Lipopeptide to a Model Membrane Bilayer

Biophysical journal, 2012-01, Vol.102 (3), p.92a-92a

2012

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Characterization of a potent antimicrobial lipopeptide via coarse-grained molecular dynamics

Biochimica et biophysica acta, 2012-02, Vol.1818 (2), p.212-218

2012

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Investigation of the Mechanism of Antimicrobial Lipopeptides using Coarse-Grained Molecular Dynamics Simulations

Biophysical journal, 2013-01, Vol.104 (2), p.602a-602a

2013

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Exploring the Mechanisms of Antimicrobial Lipopeptides with Molecular Simulation

Biophysical journal, 2013-01, Vol.104 (2), p.9a-10a

2013

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Thermodynamics of Antimicrobial Lipopeptides Interaction with Lipid Membranes

Lin, Dejun

2015

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A study on large coherent structures and noise emission in a turbulent round jet

Science China. Physics, mechanics & astronomy, 2014-08, Vol.57 (8), p.1552-1562

2014

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Expression, purification and preliminary crystallographic analysis of human thyroid hormone responsive protein

Acta crystallographica. Section F, Structural biology and crystallization communications, 2011-08, Vol.67 (8), p.941-946

2011

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Three dimensional simulation of internal wave attractors in the Luzon Strait

Acta oceanologica Sinica, 2015-11, Vol.34 (11), p.14-21

2015

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Dynamical mechanism of the stratospheric quasibiennial oscillation impact on the South China Sea Summer Monsoon

Science China. Earth sciences, 2007 (9), p.1424-1432

ZHENG Bin GU DeJun LIN AiLan LI ChunHui

2007

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Mode decomposition of a noise suppressed mixing layer

Theoretical and applied mechanics letters, 2013-01, Vol.3 (4), p.44-48, Article 042007

2013

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Response of Internal Waves to 2005 Typhoon Damrey over the Northwestern Shelf of the South China Sea

Journal of Ocean University of China, 2008-08, Vol.7 (3), p.251-257

2008

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Coarsed-Grained Membrane Force Field Based on Gay–Berne Potential and Electric Multipoles

Many-Body Effects and Electrostatics in Biomolecules, 2016, p.513-532

2016

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Novel Porous Polyethersulfone Beads as Matrix to Immobilize Comamonas testosteroni sp. bdq06 in Quinoline Biodegradation

Chemical research in Chinese universities, 2015-08, Vol.31 (4), p.645-650

2015

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HiCRep.py: fast comparison of Hi-C contact matrices in Python

Local chromatin fiber folding represses transcription and loop extrusion in quiescent cells

Generalized and efficient algorithm for computing multipole energies and gradients based on Cartesian tensors

Thermodynamics of Micelle Formation and Membrane Fusion Modulate Antimicrobial Lipopeptide Activity

Single-cell mRNA quantification and differential analysis with Census

Thermodynamics of Antimicrobial Lipopeptide Binding to Membranes: Origins of Affinity and Selectivity

Unsupervised embedding of single-cell Hi-C data

Thermodynamics Govern the Mechanism of Antimicrobial Lipopeptides: Insights from Coarse-Grained Molecular Dynamics Simulations

A High Performance Cobalt-Doped ZnO Visible Light Photocatalyst and Its Photogenerated Charge Transfer Properties

Investigation of the Mechanism of Antimicrobial Lipopeptides using Coarse-Grained Molecular Dynamics Simulations

The 4D nucleome project

Computational methods for analyzing and modeling genome structure and organization

Estimating the Free Energy to Bind a Potent Antimicrobial Lipopeptide to a Model Membrane Bilayer

Characterization of a potent antimicrobial lipopeptide via coarse-grained molecular dynamics

Investigation of the Mechanism of Antimicrobial Lipopeptides using Coarse-Grained Molecular Dynamics Simulations

Exploring the Mechanisms of Antimicrobial Lipopeptides with Molecular Simulation

Thermodynamics of Antimicrobial Lipopeptides Interaction with Lipid Membranes

A study on large coherent structures and noise emission in a turbulent round jet

Expression, purification and preliminary crystallographic analysis of human thyroid hormone responsive protein

Three dimensional simulation of internal wave attractors in the Luzon Strait

Dynamical mechanism of the stratospheric quasibiennial oscillation impact on the South China Sea Summer Monsoon

Mode decomposition of a noise suppressed mixing layer

Response of Internal Waves to 2005 Typhoon Damrey over the Northwestern Shelf of the South China Sea

Coarsed-Grained Membrane Force Field Based on Gay–Berne Potential and Electric Multipoles

Novel Porous Polyethersulfone Beads as Matrix to Immobilize Comamonas testosteroni sp. bdq06 in Quinoline Biodegradation

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