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Genetic manipulation of gut microbes enables single-gene interrogation in a complex microbiome

Cell, 2022-02, Vol.185 (3), p.547-562.e22

2022

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Transferable Immunoglobulin A–Coated Odoribacter splanchnicus in Responders to Fecal Microbiota Transplantation for Ulcerative Colitis Limits Colonic Inflammation

Gastroenterology (New York, N.Y. 1943), 2022-01, Vol.162 (1), p.166-178

2022

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The subgingival microbial community of feline periodontitis and gingivostomatitis: characterization and comparison between diseased and healthy cats

Scientific reports, 2019-08, Vol.9 (1), p.12340-10, Article 12340

2019

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Adherent-invasive E. coli metabolism of propanediol in Crohn’s disease regulates phagocytes to drive intestinal inflammation

Cell host & microbe, 2021-04, Vol.29 (4), p.607-619.e8

2021

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Milk microbiome and bacterial load following dry cow therapy without antibiotics in dairy cows with healthy mammary gland

Scientific reports, 2017-08, Vol.7 (1), p.8067-10, Article 8067

2017

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Altered microbiomes in bovine digital dermatitis lesions, and the gut as a pathogen reservoir

PloS one, 2015-03, Vol.10 (3), p.e0120504-e0120504

2015

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Prepartum and postpartum rumen fluid microbiomes: characterization and correlation with production traits in dairy cows

Applied and Environmental Microbiology, 2015-02, Vol.81 (4), p.1327-1337

2015

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The upper respiratory tract microbiome and its potential role in bovine respiratory disease and otitis media

Scientific reports, 2016-07, Vol.6 (1), p.29050-29050, Article 29050

2016

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Uterine Microbiota Progression from Calving until Establishment of Metritis in Dairy Cows

Applied and environmental microbiology, 2015-09, Vol.81 (18), p.6324-6332

2015

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Longitudinal metagenomic profiling of bovine milk to assess the impact of intramammary treatment using a third-generation cephalosporin

Scientific reports, 2016-11, Vol.6 (1), p.37565-37565, Article 37565

2016

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Eating for Two: Diet and the Microbiome in Ulcerative Colitis

Journal of Crohn's and colitis, 2022-03, Vol.16 (3), p.341-342

2022

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Deciphering upper respiratory tract microbiota complexity in healthy calves and calves that develop respiratory disease using shotgun metagenomics

Journal of dairy science, 2017-02, Vol.100 (2), p.1445-1458

2017

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Shotgun Metagenomic Sequencing Reveals Functional Genes and Microbiome Associated with Bovine Digital Dermatitis

PloS one, 2015-07, Vol.10 (7), p.e0133674-e0133674

2015

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The association of hyperketonemia with fecal and rumen microbiota at time of diagnosis in a case-control cohort of early lactation cows

BMC veterinary research, 2022-11, Vol.18 (1), p.411-411, Article 411

2022

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Ingestion of Milk Containing Very Low Concentration of Antimicrobials: Longitudinal Effect on Fecal Microbiota Composition in Preweaned Calves

PloS one, 2016-01, Vol.11 (1), p.e0147525-e0147525

2016

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Evaluation of milk sample fractions for characterization of milk microbiota from healthy and clinical mastitis cows

PloS one, 2018-03, Vol.13 (3), p.e0193671-e0193671

2018

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Blood as a route of transmission of uterine pathogens from the gut to the uterus in cows

Microbiome, 2017-08, Vol.5 (1), p.109-109, Article 109

2017

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The Bos taurus maternal microbiome: Role in determining the progeny early-life upper respiratory tract microbiome and health

PloS one, 2019-03, Vol.14 (3), p.e0208014-e0208014

2019

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Impacts of feeding preweaned calves milk containing drug residues on the functional profile of the fecal microbiota

Scientific reports, 2018-01, Vol.8 (1), p.554-12, Article 554

2018

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Uterine Microbiota and Immune Parameters Associated with Fever in Dairy Cows with Metritis

PloS one, 2016-11, Vol.11 (11), p.e0165740-e0165740

2016

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Agr2-associated ER stress promotes adherent-invasive E. coli dysbiosis and triggers CD103+ dendritic cell IL-23-dependent ileocolitis

Cell reports (Cambridge), 2022-11, Vol.41 (7), p.111637-111637, Article 111637

2022

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Ceftiofur reduced Fusobacterium leading to uterine microbiota alteration in dairy cows with metritis

Animal microbiome, 2021-01, Vol.3 (1), p.15-15, Article 15

2021

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The gut microbiome regulates the clinical efficacy of sulfasalazine therapy for IBD-associated spondyloarthritis

Cell reports. Medicine, 2024-03, Vol.5 (3), p.101431-101431, Article 101431

2024

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Lameness Prevalence and Risk Factors in Large Dairy Farms in Upstate New York. Model Development for the Prediction of Claw Horn Disruption Lesions

PloS one, 2016-01, Vol.11 (1), p.e0146718-e0146718

2016

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Genetic manipulation of gut microbes enables single-gene interrogation in a complex microbiome

Transferable Immunoglobulin A–Coated Odoribacter splanchnicus in Responders to Fecal Microbiota Transplantation for Ulcerative Colitis Limits Colonic Inflammation

The subgingival microbial community of feline periodontitis and gingivostomatitis: characterization and comparison between diseased and healthy cats

Adherent-invasive E. coli metabolism of propanediol in Crohn’s disease regulates phagocytes to drive intestinal inflammation

Milk microbiome and bacterial load following dry cow therapy without antibiotics in dairy cows with healthy mammary gland

Altered microbiomes in bovine digital dermatitis lesions, and the gut as a pathogen reservoir

Prepartum and postpartum rumen fluid microbiomes: characterization and correlation with production traits in dairy cows

The upper respiratory tract microbiome and its potential role in bovine respiratory disease and otitis media

Uterine Microbiota Progression from Calving until Establishment of Metritis in Dairy Cows

Longitudinal metagenomic profiling of bovine milk to assess the impact of intramammary treatment using a third-generation cephalosporin

Eating for Two: Diet and the Microbiome in Ulcerative Colitis

Deciphering upper respiratory tract microbiota complexity in healthy calves and calves that develop respiratory disease using shotgun metagenomics

Shotgun Metagenomic Sequencing Reveals Functional Genes and Microbiome Associated with Bovine Digital Dermatitis

The association of hyperketonemia with fecal and rumen microbiota at time of diagnosis in a case-control cohort of early lactation cows

Ingestion of Milk Containing Very Low Concentration of Antimicrobials: Longitudinal Effect on Fecal Microbiota Composition in Preweaned Calves

Evaluation of milk sample fractions for characterization of milk microbiota from healthy and clinical mastitis cows

Blood as a route of transmission of uterine pathogens from the gut to the uterus in cows

The Bos taurus maternal microbiome: Role in determining the progeny early-life upper respiratory tract microbiome and health

Impacts of feeding preweaned calves milk containing drug residues on the functional profile of the fecal microbiota

Uterine Microbiota and Immune Parameters Associated with Fever in Dairy Cows with Metritis

Agr2-associated ER stress promotes adherent-invasive E. coli dysbiosis and triggers CD103+ dendritic cell IL-23-dependent ileocolitis

Subcutaneous immunization with inactivated bacterial components and purified protein of Escherichia coli, Fusobacterium necrophorum and Trueperella pyogenes prevents puerperal metritis in Holstein dairy cows

Ceftiofur reduced Fusobacterium leading to uterine microbiota alteration in dairy cows with metritis

The gut microbiome regulates the clinical efficacy of sulfasalazine therapy for IBD-associated spondyloarthritis

Lameness Prevalence and Risk Factors in Large Dairy Farms in Upstate New York. Model Development for the Prediction of Claw Horn Disruption Lesions

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