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Exercise and probiotics attenuate the development of Alzheimer's disease in transgenic mice: Role of microbiome

Experimental gerontology, 2019-01, Vol.115, p.122-131

2019

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Non-small cell lung cancer patients treated with Anti-PD1 immunotherapy show distinct microbial signatures and metabolic pathways according to progression-free survival and PD-L1 status

Oncoimmunology, 2023-12, Vol.12 (1), p.2204746-2204746

2023

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Alterations of the gut microbiome are associated with epigenetic age acceleration and physical fitness

Aging cell, 2024-04, Vol.23 (4), p.e14101-e14101

2024

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COVIDOUTCOME-estimating COVID severity based on mutation signatures in the SARS-CoV-2 genome

Database : the journal of biological databases and curation, 2021-05, Vol.2021

2021

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Propagation on Molecular Interaction Networks: Prediction of Effective Drug Combinations and Biomarkers in Cancer Treatment

Current pharmaceutical design, 2017-01, Vol.23 (1), p.5

2017

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Multiple Benefits of Plasmid-Mediated Quinolone Resistance Determinants in Klebsiella pneumoniae ST11 High-Risk Clone and Recently Emerging ST307 Clone

Frontiers in microbiology, 2019-02, Vol.10, p.157-157

2019

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A comprehensive time course and correlation analysis of indomethacin-induced inflammation, bile acid alterations and dysbiosis in the rat small intestine

Biochemical pharmacology, 2021-08, Vol.190, p.114590-114590, Article 114590

2021

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CX, DPX, and PCW: Web Servers for the Visualization of Interior and Protruding Regions of Protein Structures in 3D and 1D

Methods in molecular biology (Clifton, N.J.), 2017-01, Vol.1484, p.301

2017

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Association between Gut Microbial Diversity and Carotid Intima-Media Thickness

Medicina (Kaunas, Lithuania), 2021-02, Vol.57 (3), p.195

2021

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Gut Microbiome in Patients with Obstructive Sleep Apnoea

Applied sciences, 2022-02, Vol.12 (4), p.2007

2022

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The Relationship between Atherosclerosis and Gut Microbiome in Patients with Obstructive Sleep Apnoea

Applied sciences, 2022-11, Vol.12 (22), p.11484

2022

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Census of solo LuxR genes in prokaryotic genomes

Frontiers in cellular and infection microbiology, 2015-03, Vol.5, p.20-20

2015

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Biomedical hypothesis generation by text mining and gene prioritization

Protein and peptide letters, 2014-01, Vol.21 (8), p.847

2014

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Bladder cancer-related microbiota: examining differences in urine and tissue samples

Scientific reports, 2020-07, Vol.10 (1), p.11042-11042, Article 11042

2020

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The influence of antibiotics on transitory resistome during gut colonization with CTX-M-15 and OXA-162 producing Klebsiella pneumoniae ST15

Scientific reports, 2021-03, Vol.11 (1), p.6335-10, Article 6335

2021

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ProkBERT family: genomic language models for microbiome applications

Frontiers in microbiology, 2023, Vol.14, p.1331233-1331233

2023

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Colonization Dynamics of Multidrug-Resistant Klebsiella pneumoniae Are Dictated by Microbiota-Cluster Group Behavior over Individual Antibiotic Susceptibility: A Metataxonomic Analysis

Antibiotics (Basel), 2021-03, Vol.10 (3), p.268

2021

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A Network-Based Target Overlap Score for Characterizing Drug Combinations: High Correlation with Cancer Clinical Trial Results

PloS one, 2015-06, Vol.10 (6), p.e0129267-e0129267

2015

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The Nonsteroidal Anti-Inflammatory Drug Ketorolac Alters the Small Intestinal Microbiota and Bile Acids Without Inducing Intestinal Damage or Delaying Peristalsis in the Rat

Frontiers in pharmacology, 2021-06, Vol.12, p.664177-664177

2021

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COVID-19 Infection Alters the Microbiome: Elite Athletes and Sedentary Patients Have Similar Bacterial Flora

Genes, 2021-10, Vol.12 (10), p.1577

2021

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JBioWH: an open-source Java framework for bioinformatics data integration

Database : the journal of biological databases and curation, 2013, Vol.2013, p.bat051-bat051

2013

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Acquired qnrVC1 and blaNDM-1 resistance markers in an international high-risk Pseudomonas aeruginosa ST773 clone

Journal of medical microbiology, 2019-03, Vol.68 (3), p.336-338

2019

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Fast and sensitive alignment of microbial whole genome sequencing reads to large sequence datasets on a desktop PC: application to metagenomic datasets and pathogen identification

PloS one, 2014-07, Vol.9 (7), p.e103441-e103441

2014

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Differential signal sensitivities can contribute to the stability of multispecies bacterial communities

Biology direct, 2017-09, Vol.12 (1), p.22-22, Article 22

2017

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Occurrence of Ordered and Disordered Structural Elements in Postsynaptic Proteins Supports Optimization for Interaction Diversity

Entropy (Basel, Switzerland), 2019-08, Vol.21 (8), p.761

2019

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Exercise and probiotics attenuate the development of Alzheimer's disease in transgenic mice: Role of microbiome

Non-small cell lung cancer patients treated with Anti-PD1 immunotherapy show distinct microbial signatures and metabolic pathways according to progression-free survival and PD-L1 status

Alterations of the gut microbiome are associated with epigenetic age acceleration and physical fitness

COVIDOUTCOME-estimating COVID severity based on mutation signatures in the SARS-CoV-2 genome

Propagation on Molecular Interaction Networks: Prediction of Effective Drug Combinations and Biomarkers in Cancer Treatment

Multiple Benefits of Plasmid-Mediated Quinolone Resistance Determinants in Klebsiella pneumoniae ST11 High-Risk Clone and Recently Emerging ST307 Clone

A comprehensive time course and correlation analysis of indomethacin-induced inflammation, bile acid alterations and dysbiosis in the rat small intestine

CX, DPX, and PCW: Web Servers for the Visualization of Interior and Protruding Regions of Protein Structures in 3D and 1D

Association between Gut Microbial Diversity and Carotid Intima-Media Thickness

Gut Microbiome in Patients with Obstructive Sleep Apnoea

The Relationship between Atherosclerosis and Gut Microbiome in Patients with Obstructive Sleep Apnoea

Census of solo LuxR genes in prokaryotic genomes

Biomedical hypothesis generation by text mining and gene prioritization

Bladder cancer-related microbiota: examining differences in urine and tissue samples

The influence of antibiotics on transitory resistome during gut colonization with CTX-M-15 and OXA-162 producing Klebsiella pneumoniae ST15

ProkBERT family: genomic language models for microbiome applications

Colonization Dynamics of Multidrug-Resistant Klebsiella pneumoniae Are Dictated by Microbiota-Cluster Group Behavior over Individual Antibiotic Susceptibility: A Metataxonomic Analysis

A Network-Based Target Overlap Score for Characterizing Drug Combinations: High Correlation with Cancer Clinical Trial Results

The Nonsteroidal Anti-Inflammatory Drug Ketorolac Alters the Small Intestinal Microbiota and Bile Acids Without Inducing Intestinal Damage or Delaying Peristalsis in the Rat

COVID-19 Infection Alters the Microbiome: Elite Athletes and Sedentary Patients Have Similar Bacterial Flora

JBioWH: an open-source Java framework for bioinformatics data integration

Acquired qnrVC1 and blaNDM-1 resistance markers in an international high-risk Pseudomonas aeruginosa ST773 clone

Fast and sensitive alignment of microbial whole genome sequencing reads to large sequence datasets on a desktop PC: application to metagenomic datasets and pathogen identification

Differential signal sensitivities can contribute to the stability of multispecies bacterial communities

Occurrence of Ordered and Disordered Structural Elements in Postsynaptic Proteins Supports Optimization for Interaction Diversity

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