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Identifying driver pathways based on a parameter-free model and a partheno-genetic algorithm

BMC bioinformatics, 2023-05, Vol.24 (1), p.211-211, Article 211

2023

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Mdwgan-gp: data augmentation for gene expression data based on multiple discriminator WGAN-GP

BMC bioinformatics, 2023-11, Vol.24 (1), p.1-427, Article 427

2023

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A model and algorithm for identifying driver pathways based on weighted non-binary mutation matrix

Applied intelligence (Dordrecht, Netherlands), 2022, Vol.52 (1), p.127-140

2022

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ICDM-GEHC: identifying cancer driver module based on graph embedding and hierarchical clustering

Complex & intelligent systems, 2024-06, Vol.10 (3), p.3411-3427

2024

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United Neighborhood Closeness Centrality and Orthology for Predicting Essential Proteins

IEEE/ACM transactions on computational biology and bioinformatics, 2020-07, Vol.17 (4), p.1451-1458

2020

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Identifying common driver modules by equilibrating coverage and mutual exclusivity across pan-cancer data

Neurocomputing (Amsterdam), 2022-07, Vol.492, p.408-420

2022

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AGImpute: imputation of scRNA-seq data based on a hybrid GAN with dropouts identification

Bioinformatics (Oxford, England), 2024-02, Vol.40 (2)

2024

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A model and multi-core parallel co-evolution algorithm for identifying cancer driver pathways

Engineering applications of artificial intelligence, 2024-08, Vol.134, p.108658, Article 108658

2024

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Predicting essential proteins based on subcellular localization, orthology and PPI networks

BMC bioinformatics, 2016-08, Vol.17 Suppl 8 (Suppl 8), p.279-279, Article 279

2016

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A nonlinear model and an algorithm for identifying cancer driver pathways

Applied soft computing, 2022-11, Vol.129, p.109578, Article 109578

2022

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Identification of cancer-related module in protein-protein interaction network based on gene prioritization

Journal of bioinformatics and computational biology, 2022-02, Vol.20 (1), p.2150031

2022

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IDM-SPS: Identifying driver module with somatic mutation, PPI network and subcellular localization

Engineering applications of artificial intelligence, 2021-11, Vol.106, p.104482, Article 104482

2021

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A model and cooperative co-evolution algorithm for identifying driver pathways based on the integrated data and PPI network

Expert systems with applications, 2023-02, Vol.212, p.118753, Article 118753

2023

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Two novel models and a parthenogenetic algorithm for detecting common driver pathways from pan-cancer data

Engineering applications of artificial intelligence, 2020-11, Vol.96, p.104010, Article 104010

2020

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Identification of cancer driver genes based on dynamic incentive model

IEEE/ACM transactions on computational biology and bioinformatics, 2024-09, Vol.PP, p.1-12

2024

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A novel extended Pareto Optimality Consensus model for predicting essential proteins

Journal of theoretical biology, 2019-11, Vol.480, p.141-149

2019

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Identification of cancer driver genes based on hierarchical weak consensus model

Health information science and systems, 2024-03, Vol.12 (1), p.21-21, Article 21

2024

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Essential proteins discovery based on dominance relationship and neighborhood similarity centrality

Health information science and systems, 2023-11, Vol.11 (1), p.55-55, Article 55

2023

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IntroGRN: Gene Regulatory Network Inference from Single-Cell RNA Data Based on Introspective VAE

Bioinformatics Research and Applications, 2024, Vol.14954, p.427-438

2024

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Identifying driver genes in cancer based on Pareto optimality consensus

2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2022, p.740-743

2022

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Immune response in Balb／c mice induced by recombinant spike protein of severe acute respiratory syndrome coronavirus

Chinese medical journal, 2005-05, Vol.118 (10), p.857-860

2005

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Serum Biomarkers for Inflammatory Bowel Disease

Frontiers in medicine, 2020-04, Vol.7, p.123-123

2020

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Therapeutic potential of the secreted Kazal-type serine protease inhibitor SPINK4 in colitis

Nature communications, 2024-07, Vol.15 (1), p.5874-17, Article 5874

2024

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Protocadherin 20 maintains intestinal barrier function to protect against Crohn's disease by targeting ATF6

Genome Biology, 2023-07, Vol.24 (1), p.159-159, Article 159

2023

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MALAT1 Maintains the Intestinal Mucosal Homeostasis in Crohn’s Disease via the miR-146b-5p-CLDN11/NUMB Pathway

Journal of Crohn's and colitis, 2021-09, Vol.15 (9), p.1542-1557

2021

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Identifying driver pathways based on a parameter-free model and a partheno-genetic algorithm

Mdwgan-gp: data augmentation for gene expression data based on multiple discriminator WGAN-GP

A model and algorithm for identifying driver pathways based on weighted non-binary mutation matrix

ICDM-GEHC: identifying cancer driver module based on graph embedding and hierarchical clustering

United Neighborhood Closeness Centrality and Orthology for Predicting Essential Proteins

Identifying common driver modules by equilibrating coverage and mutual exclusivity across pan-cancer data

AGImpute: imputation of scRNA-seq data based on a hybrid GAN with dropouts identification

A model and multi-core parallel co-evolution algorithm for identifying cancer driver pathways

Predicting essential proteins based on subcellular localization, orthology and PPI networks

A nonlinear model and an algorithm for identifying cancer driver pathways

Identification of cancer-related module in protein-protein interaction network based on gene prioritization

IDM-SPS: Identifying driver module with somatic mutation, PPI network and subcellular localization

A model and cooperative co-evolution algorithm for identifying driver pathways based on the integrated data and PPI network

Two novel models and a parthenogenetic algorithm for detecting common driver pathways from pan-cancer data

Identification of cancer driver genes based on dynamic incentive model

A novel extended Pareto Optimality Consensus model for predicting essential proteins

Identification of cancer driver genes based on hierarchical weak consensus model

Essential proteins discovery based on dominance relationship and neighborhood similarity centrality

IntroGRN: Gene Regulatory Network Inference from Single-Cell RNA Data Based on Introspective VAE

Identifying driver genes in cancer based on Pareto optimality consensus

Immune response in Balb／c mice induced by recombinant spike protein of severe acute respiratory syndrome coronavirus

Serum Biomarkers for Inflammatory Bowel Disease

Therapeutic potential of the secreted Kazal-type serine protease inhibitor SPINK4 in colitis

Protocadherin 20 maintains intestinal barrier function to protect against Crohn's disease by targeting ATF6

MALAT1 Maintains the Intestinal Mucosal Homeostasis in Crohn’s Disease via the miR-146b-5p-CLDN11/NUMB Pathway

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