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A three-dimensional RNA motif mediates directional trafficking of Potato spindle tuber viroid from epidermal to palisade mesophyll cells in Nicotiana benthamiana

PLoS pathogens, 2019-10, Vol.15 (10), p.e1008147

2019

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The Nucleic Acid Database: new features and capabilities

Nucleic acids research, 2014-01, Vol.42 (Database issue), p.D114-D122

2014

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Automated classification of RNA 3D motifs and the RNA 3D Motif Atlas

RNA (Cambridge), 2013-10, Vol.19 (10), p.1327-1340

2013

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The building blocks and motifs of RNA architecture

Current opinion in structural biology, 2006-06, Vol.16 (3), p.279-287

2006

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RNA 3-dimensional structural motifs as a critical constraint of viroid RNA evolution

PLoS pathogens, 2018-02, Vol.14 (2), p.e1006801-e1006801

2018

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Functional analysis reveals G/U pairs critical for replication and trafficking of an infectious non-coding viroid RNA

Nucleic acids research, 2020-04, Vol.48 (6), p.3134-3155

2020

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Correction: A three-dimensional RNA motif mediates directional trafficking of Potato spindle tuber viroid from epidermal to palisade mesophyll cells in Nicotiana benthamiana

PLoS pathogens, 2022-03, Vol.18 (3), p.e1010421-e1010421

2022

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Allelic RNA Motifs in Regulating Systemic Trafficking of Potato Spindle Tuber Viroid

Viruses, 2018-03, Vol.10 (4), p.160

2018

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An RNA-centric historical narrative around the Protein Data Bank

The Journal of biological chemistry, 2021-01, Vol.296, p.100555-100555, Article 100555

2021

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Quantum Chemical Studies of Nucleic Acids: Can We Construct a Bridge to the RNA Structural Biology and Bioinformatics Communities?

The journal of physical chemistry. B, 2010-12, Vol.114 (48), p.15723-15741

2010

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Engineering cooperative tecto-RNA complexes having programmable stoichiometries

Nucleic acids research, 2011-04, Vol.39 (7), p.2903-2917

2011

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Frequency and isostericity of RNA base pairs

Nucleic acids research, 2009-04, Vol.37 (7), p.2294-2312

2009

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Context-sensitivity of isosteric substitutions of non-Watson–Crick basepairs in recurrent RNA 3D motifs

Nucleic acids research, 2021-09, Vol.49 (16), p.9574-9593

2021

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Noncanonical Hydrogen Bonding in Nucleic Acids. Benchmark Evaluation of Key Base–Phosphate Interactions in Folded RNA Molecules Using Quantum-Chemical Calculations and Molecular Dynamics Simulations

The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory, 2011-10, Vol.115 (41), p.11277-11292

2011

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Generating New Specific RNA Interaction Interfaces Using C-Loops

Journal of the American Chemical Society, 2006-12, Vol.128 (50), p.16131-16137

2006

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Self-assembled RNA nanostructures

Science (American Association for the Advancement of Science), 2014-08, Vol.345 (6198), p.732-733

2014

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The non-Watson-Crick base pairs and their associated isostericity matrices

Nucleic acids research, 2002-08, Vol.30 (16), p.3497-3531

2002

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RNA nanotechnology for computer design and in vivo computation

Philosophical transactions of the Royal Society of London. Series A: Mathematical, physical, and engineering sciences, 2013-10, Vol.371 (2000), p.20120310-20120310