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Approximated and User Steerable tSNE for Progressive Visual Analytics

IEEE transactions on visualization and computer graphics, 2017-07, Vol.23 (7), p.1739-1752

2017

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Visual analysis of mass cytometry data by hierarchical stochastic neighbour embedding reveals rare cell types

Nature communications, 2017-11, Vol.8 (1), p.1740-10, Article 1740

2017

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Iron loading is a prominent feature of activated microglia in Alzheimer's disease patients

Acta neuropathologica communications, 2021-02, Vol.9 (1), p.27-27, Article 27

2021

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Heterogeneity of circulating CD8 T-cells specific to islet, neo-antigen and virus in patients with type 1 diabetes mellitus

PloS one, 2018-08, Vol.13 (8), p.e0200818-e0200818

2018

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DeepEyes: Progressive Visual Analytics for Designing Deep Neural Networks

IEEE transactions on visualization and computer graphics, 2018-01, Vol.24 (1), p.98-108

2018

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Assessment of viscous energy loss and the association with three‐dimensional vortex ring formation in left ventricular inflow: In vivo evaluation using four‐dimensional flow MRI

Magnetic resonance in medicine, 2017-02, Vol.77 (2), p.794-805

2017

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Fast Automatic Step Size Estimation for Gradient Descent Optimization of Image Registration

IEEE transactions on medical imaging, 2016-02, Vol.35 (2), p.391-403

2016

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Automatic quantification and characterization of coronary atherosclerosis with computed tomography coronary angiography: cross-correlation with intravascular ultrasound virtual histology

International Journal of Cardiovascular Imaging, 2013-06, Vol.29 (5), p.1177-1190

2013

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Quantification of aortic pulse wave velocity from a population based cohort: a fully automatic method

Journal of cardiovascular magnetic resonance, 2019-05, Vol.21 (1), p.27-27, Article 27

2019

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Integrating spatial-anatomical regularization and structure sparsity into SVM: Improving interpretation of Alzheimer's disease classification

NeuroImage (Orlando, Fla.), 2018-09, Vol.178, p.445-460

2018

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Inter‐station intensity standardization for whole‐body MR data

Magnetic resonance in medicine, 2017-01, Vol.77 (1), p.422-433

2017

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High-dimensional cytometric analysis of colorectal cancer reveals novel mediators of antitumour immunity

Gut, 2020-04, Vol.69 (4), p.691-703

2020

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Brain maturation of the adolescent rat cortex and striatum: Changes in volume and myelination

NeuroImage (Orlando, Fla.), 2014-01, Vol.84, p.35-44

2014

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Automatic Registration of Mass Spectrometry Imaging Data Sets to the Allen Brain Atlas

Analytical chemistry (Washington), 2014-04, Vol.86 (8), p.3947-3954

2014

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Memory CD4 + T cells are generated in the human fetal intestine

Nature immunology, 2019-03, Vol.20 (3), p.301-312

2019

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Validation of full-field optical coherence tomography in distinguishing malignant and benign tissue in resected pancreatic cancer specimens

PloS one, 2017-04, Vol.12 (4), p.e0175862-e0175862

2017

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An Efficient Preconditioner for Stochastic Gradient Descent Optimization of Image Registration

IEEE transactions on medical imaging, 2019-10, Vol.38 (10), p.2314-2325

2019

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GPGPU Linear Complexity t-SNE Optimization

IEEE transactions on visualization and computer graphics, 2020-01, Vol.26 (1), p.1172-1181

2020

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Morphological maturation of the mouse brain: An in vivo MRI and histology investigation

NeuroImage (Orlando, Fla.), 2016-01, Vol.125, p.144-152

2016

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Data-driven identification of prognostic tumor subpopulations using spatially mapped t-SNE of mass spectrometry imaging data

Proceedings of the National Academy of Sciences - PNAS, 2016-10, Vol.113 (43), p.12244-12249

2016

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Deep Recursive Embedding for High-Dimensional Data

IEEE transactions on visualization and computer graphics, 2022-02, Vol.28 (2), p.1237-1248, Article 1237

2022

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Brain transcriptome atlases: a computational perspective

Brain Structure and Function, 2017-05, Vol.222 (4), p.1557-1580

2017

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Interactive Visual Exploration of 3D Mass Spectrometry Imaging Data Using Hierarchical Stochastic Neighbor Embedding Reveals Spatiomolecular Structures at Full Data Resolution

Journal of proteome research, 2018-03, Vol.17 (3), p.1054-1064

2018

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Quantitative error prediction of medical image registration using regression forests

Medical image analysis, 2019-08, Vol.56, p.110-121

2019

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Approximated and User Steerable tSNE for Progressive Visual Analytics

Visual analysis of mass cytometry data by hierarchical stochastic neighbour embedding reveals rare cell types

Iron loading is a prominent feature of activated microglia in Alzheimer's disease patients

Heterogeneity of circulating CD8 T-cells specific to islet, neo-antigen and virus in patients with type 1 diabetes mellitus

DeepEyes: Progressive Visual Analytics for Designing Deep Neural Networks

Assessment of viscous energy loss and the association with three‐dimensional vortex ring formation in left ventricular inflow: In vivo evaluation using four‐dimensional flow MRI

Fast Automatic Step Size Estimation for Gradient Descent Optimization of Image Registration

Automatic quantification and characterization of coronary atherosclerosis with computed tomography coronary angiography: cross-correlation with intravascular ultrasound virtual histology

Quantification of aortic pulse wave velocity from a population based cohort: a fully automatic method

Integrating spatial-anatomical regularization and structure sparsity into SVM: Improving interpretation of Alzheimer's disease classification

Inter‐station intensity standardization for whole‐body MR data

Gene co-expression analysis identifies brain regions and cell types involved in migraine pathophysiology: a GWAS-based study using the Allen Human Brain Atlas

High-dimensional cytometric analysis of colorectal cancer reveals novel mediators of antitumour immunity

Brain maturation of the adolescent rat cortex and striatum: Changes in volume and myelination

Automatic Registration of Mass Spectrometry Imaging Data Sets to the Allen Brain Atlas

Memory CD4 + T cells are generated in the human fetal intestine

Validation of full-field optical coherence tomography in distinguishing malignant and benign tissue in resected pancreatic cancer specimens

An Efficient Preconditioner for Stochastic Gradient Descent Optimization of Image Registration

GPGPU Linear Complexity t-SNE Optimization

Morphological maturation of the mouse brain: An in vivo MRI and histology investigation

Data-driven identification of prognostic tumor subpopulations using spatially mapped t-SNE of mass spectrometry imaging data

Deep Recursive Embedding for High-Dimensional Data

Brain transcriptome atlases: a computational perspective

Interactive Visual Exploration of 3D Mass Spectrometry Imaging Data Using Hierarchical Stochastic Neighbor Embedding Reveals Spatiomolecular Structures at Full Data Resolution

Quantitative error prediction of medical image registration using regression forests

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