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Reprogramming the Methylome: Erasing Memory and Creating Diversity

Cell stem cell, 2014-06, Vol.14 (6), p.710-719

2014

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DeepCpG: accurate prediction of single-cell DNA methylation states using deep learning

Genome Biology, 2017-04, Vol.18 (1), p.67-67, Article 67

2017

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Single-cell epigenomics: powerful new methods for understanding gene regulation and cell identity

Genome Biology, 2016-04, Vol.17 (1), p.72-72, Article 72

2016

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scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells

Nature communications, 2018-02, Vol.9 (1), p.781-9, Article 781

2018

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FGF Signaling Inhibition in ESCs Drives Rapid Genome-wide Demethylation to the Epigenetic Ground State of Pluripotency

Cell stem cell, 2013-09, Vol.13 (3), p.351-359

2013

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Tracking the embryonic stem cell transition from ground state pluripotency

Development (Cambridge), 2017-04, Vol.144 (7), p.1221-1234

2017

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Osteoclast differentiation factor RANKL controls development of progestin-driven mammary cancer

Nature (London), 2010-11, Vol.468 (7320), p.98-102

2010

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scTEM-seq: Single-cell analysis of transposable element methylation to link global epigenetic heterogeneity with transcriptional programs

Scientific reports, 2022-04, Vol.12 (1), p.5776-5776, Article 5776

2022

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Cellular atlases of the entire mouse brain

Nature (London), 2023-12, Vol.624 (7991), p.253-255

2023

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Genome-Wide Analysis of DNA Methylation in Single Cells Using a Post-bisulfite Adapter Tagging Approach

Methods in molecular biology (Clifton, N.J.), 2018, Vol.1712, p.87

2018

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Smchd1 is a maternal effect gene required for genomic imprinting

eLife, 2020-11, Vol.9

2020

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Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity

Nature methods, 2014-08, Vol.11 (8), p.817-820

2014

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Genome-wide base-resolution mapping of DNA methylation in single cells using single-cell bisulfite sequencing (scBS-seq)

Nature protocols, 2017-03, Vol.12 (3), p.534-547

2017

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Erratum to: DeepCpG: accurate prediction of single-cell DNA methylation states using deep learning

Genome Biology, 2017-05, Vol.18 (1), p.90-90, Article 90

2017

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Maternal SMCHD1 controls both imprinted Xist expression and imprinted X chromosome inactivation

Epigenetics & chromatin, 2022-07, Vol.15 (1), p.26-11, Article 26

2022

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Crosstalk between DNA methylation and hypoxia in acute myeloid leukaemia

Clinical epigenetics, 2023-09, Vol.15 (1), p.1-15, Article 150

2023

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Parallel single-cell sequencing links transcriptional and epigenetic heterogeneity

Nature methods, 2016-03, Vol.13 (3), p.229-232

2016

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The Promise of Single‐cell Technology in Providing New Insights Into the Molecular Heterogeneity and Management of Acute Lymphoblastic Leukemia

HemaSphere, 2022-06, Vol.6 (6), p.e734-n/a

2022

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Allosteric activation of the extracellular Ca2+-sensing receptor by L-amino acids enhances ERK1/2 phosphorylation

Biochemical journal, 2007-05, Vol.404 (1), p.141-149

2007

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Etoposide induces nuclear re-localisation of AID

PloS one, 2013-12, Vol.8 (12), p.e82110

2013

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Unravelling the Epigenome of Myelodysplastic Syndrome: Diagnosis, Prognosis, and Response to Therapy

Cancers, 2020-11, Vol.12 (11), p.3128

2020

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Breathing air in air: in what ways might extant amphibious fish biology relate to prevailing concepts about early tetrapods, the evolution of vertebrate air breathing, and the vertebrate land transition?

Physiological and biochemical zoology, 2004-09, Vol.77 (5), p.720-731

2004

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Interplay between progesterone and prolactin in mammary development and implications for breast cancer

Molecular and cellular endocrinology, 2012-06, Vol.357 (1-2), p.101-107

2012

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Progesterone drives mammary secretory differentiation via RankL-mediated induction of Elf5 in luminal progenitor cells

Development (Cambridge), 2013-04, Vol.140 (7), p.1397-1401

2013

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Reprogramming the Methylome: Erasing Memory and Creating Diversity

DeepCpG: accurate prediction of single-cell DNA methylation states using deep learning

Single-cell epigenomics: powerful new methods for understanding gene regulation and cell identity

scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells

FGF Signaling Inhibition in ESCs Drives Rapid Genome-wide Demethylation to the Epigenetic Ground State of Pluripotency

Tracking the embryonic stem cell transition from ground state pluripotency

A Menin-MLL Inhibitor Induces Specific Chromatin Changes and Eradicates Disease in Models of MLL-Rearranged Leukemia

Osteoclast differentiation factor RANKL controls development of progestin-driven mammary cancer

scTEM-seq: Single-cell analysis of transposable element methylation to link global epigenetic heterogeneity with transcriptional programs

Cellular atlases of the entire mouse brain

Genome-Wide Analysis of DNA Methylation in Single Cells Using a Post-bisulfite Adapter Tagging Approach

Smchd1 is a maternal effect gene required for genomic imprinting

Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity

Genome-wide base-resolution mapping of DNA methylation in single cells using single-cell bisulfite sequencing (scBS-seq)

Erratum to: DeepCpG: accurate prediction of single-cell DNA methylation states using deep learning

Maternal SMCHD1 controls both imprinted Xist expression and imprinted X chromosome inactivation

Crosstalk between DNA methylation and hypoxia in acute myeloid leukaemia

Parallel single-cell sequencing links transcriptional and epigenetic heterogeneity

The Promise of Single‐cell Technology in Providing New Insights Into the Molecular Heterogeneity and Management of Acute Lymphoblastic Leukemia

Allosteric activation of the extracellular Ca2+-sensing receptor by L-amino acids enhances ERK1/2 phosphorylation

Etoposide induces nuclear re-localisation of AID

Unravelling the Epigenome of Myelodysplastic Syndrome: Diagnosis, Prognosis, and Response to Therapy

Breathing air in air: in what ways might extant amphibious fish biology relate to prevailing concepts about early tetrapods, the evolution of vertebrate air breathing, and the vertebrate land transition?

Interplay between progesterone and prolactin in mammary development and implications for breast cancer

Progesterone drives mammary secretory differentiation via RankL-mediated induction of Elf5 in luminal progenitor cells

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