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Single-Cell Genomic Characterization Reveals the Cellular Reprogramming of the Gastric Tumor Microenvironment

Clinical cancer research, 2020-06, Vol.26 (11), p.2640-2653

2020

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Single-cell characterization of CRISPR-modified transcript isoforms with nanopore sequencing

Genome Biology, 2021-12, Vol.22 (1), p.331-331, Article 331

2021

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CRISPR–Cas9-targeted fragmentation and selective sequencing enable massively parallel microsatellite analysis

Nature communications, 2017-02, Vol.8 (1), p.14291-14291, Article 14291

2017

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Single-molecule methylation profiles of cell-free DNA in cancer with nanopore sequencing

Genome medicine, 2023-05, Vol.15 (1), p.33-13, Article 33

2023

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Single molecule counting and assessment of random molecular tagging errors with transposable giga-scale error-correcting barcodes

BMC genomics, 2017-09, Vol.18 (1), p.745-745, Article 745

2017

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Linked read sequencing resolves complex genomic rearrangements in gastric cancer metastases

Genome medicine, 2017-06, Vol.9 (1), p.57-57, Article 57

2017

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Tumor-associated microbiome features of metastatic colorectal cancer and clinical implications

Frontiers in oncology, 2024-01, Vol.13, p.1310054-1310054

2024

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A Complete Microfluidic Screening Platform for Rational Protein Crystallization

Journal of the American Chemical Society, 2007-01, Vol.129 (3), p.454-455

2007

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Chromosome-scale mega-haplotypes enable digital karyotyping of cancer aneuploidy

Nucleic acids research, 2017-11, Vol.45 (19), p.e162-e162

2017

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Profiling SARS-CoV-2 mutation fingerprints that range from the viral pangenome to individual infection quasispecies

Genome medicine, 2021-04, Vol.13 (1), p.62-62, Article 62

2021

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Germline variants of ATG7 in familial cholangiocarcinoma alter autophagy and p62

Scientific reports, 2022-06, Vol.12 (1), p.10333-10333, Article 10333

2022

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Single-cell multi-gene identification of somatic mutations and gene rearrangements in cancer

NAR cancer, 2023-09, Vol.5 (3)

2023

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High Sensitivity Detection and Quantitation of DNA Copy Number and Single Nucleotide Variants with Single Color Droplet Digital PCR

Analytical chemistry (Washington), 2014-03, Vol.86 (5), p.2618-2624

2014

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Colorectal Cancer Metastases in the Liver Establish Immunosuppressive Spatial Networking between Tumor-Associated SPP1+ Macrophages and Fibroblasts

Clinical cancer research, 2023-01, Vol.29 (1), p.244-260

2023

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Direct measurement of engineered cancer mutations and their transcriptional phenotypes in single cells

Nature biotechnology, 2024-08, Vol.42 (8), p.1254-1262

2024

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Integrative single-cell analysis of allele-specific copy number alterations and chromatin accessibility in cancer

Nature biotechnology, 2021-10, Vol.39 (10), p.1259-1269

2021

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Robust Multiplexed Clustering and Denoising of Digital PCR Assays by Data Gridding

Analytical chemistry (Washington), 2017-11, Vol.89 (22), p.11913-11917

2017

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Covalent “Click Chemistry”-Based Attachment of DNA onto Solid Phase Enables Iterative Molecular Analysis

Analytical chemistry (Washington), 2019-02, Vol.91 (3), p.1706-1710

2019

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Single-cell transcriptome analysis identifies distinct cell types and niche signaling in a primary gastric organoid model

Scientific reports, 2019-03, Vol.9 (1), p.4536-4536, Article 4536

2019

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New quantitative methods for measuring plasmid loss rates reveal unexpected stability

Plasmid, 2013-11, Vol.70 (3), p.353-361

2013

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A functional CRISPR/Cas9 screen identifies kinases that modulate FGFR inhibitor response in gastric cancer

Oncogenesis (New York, NY), 2019-05, Vol.8 (5), p.33-33, Article 33

2019

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Chromosome-scale mega-haplotypes enable digital karyotyping of cancer aneuploidy

Nucleic acids research, 2017-11, Vol.45 (19), p.e162

2017

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Single-Color Digital PCR Provides High-Performance Detection of Cancer Mutations from Circulating DNA

The Journal of molecular diagnostics : JMD, 2017-09, Vol.19 (5), p.697-710

2017

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Joint single cell DNA-seq and RNA-seq of gastric cancer cell lines reveals rules of in vitro evolution

NAR genomics and bioinformatics, 2020-06, Vol.2 (2)

2020

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Correction to High Sensitivity Detection and Quantitation of DNA Copy Number and Single Nucleotide Variants with Single Color Droplet Digital PCR

Analytical chemistry (Washington), 2015-03, Vol.87 (5), p.3114-3114

2015

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Single-Cell Genomic Characterization Reveals the Cellular Reprogramming of the Gastric Tumor Microenvironment

Single-cell characterization of CRISPR-modified transcript isoforms with nanopore sequencing

CRISPR–Cas9-targeted fragmentation and selective sequencing enable massively parallel microsatellite analysis

Single-molecule methylation profiles of cell-free DNA in cancer with nanopore sequencing

Single molecule counting and assessment of random molecular tagging errors with transposable giga-scale error-correcting barcodes

Linked read sequencing resolves complex genomic rearrangements in gastric cancer metastases

Tumor-associated microbiome features of metastatic colorectal cancer and clinical implications

A Complete Microfluidic Screening Platform for Rational Protein Crystallization

Chromosome-scale mega-haplotypes enable digital karyotyping of cancer aneuploidy

Profiling SARS-CoV-2 mutation fingerprints that range from the viral pangenome to individual infection quasispecies

Germline variants of ATG7 in familial cholangiocarcinoma alter autophagy and p62

Single-cell multi-gene identification of somatic mutations and gene rearrangements in cancer

High Sensitivity Detection and Quantitation of DNA Copy Number and Single Nucleotide Variants with Single Color Droplet Digital PCR

Colorectal Cancer Metastases in the Liver Establish Immunosuppressive Spatial Networking between Tumor-Associated SPP1+ Macrophages and Fibroblasts

Direct measurement of engineered cancer mutations and their transcriptional phenotypes in single cells

Integrative single-cell analysis of allele-specific copy number alterations and chromatin accessibility in cancer

Robust Multiplexed Clustering and Denoising of Digital PCR Assays by Data Gridding

Covalent “Click Chemistry”-Based Attachment of DNA onto Solid Phase Enables Iterative Molecular Analysis

Single-cell transcriptome analysis identifies distinct cell types and niche signaling in a primary gastric organoid model

New quantitative methods for measuring plasmid loss rates reveal unexpected stability

A functional CRISPR/Cas9 screen identifies kinases that modulate FGFR inhibitor response in gastric cancer

Chromosome-scale mega-haplotypes enable digital karyotyping of cancer aneuploidy

Single-Color Digital PCR Provides High-Performance Detection of Cancer Mutations from Circulating DNA

Joint single cell DNA-seq and RNA-seq of gastric cancer cell lines reveals rules of in vitro evolution

Correction to High Sensitivity Detection and Quantitation of DNA Copy Number and Single Nucleotide Variants with Single Color Droplet Digital PCR

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