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Technologies and challenges in large-scale phosphoproteomics

Proteomics (Weinheim), 2013-03, Vol.13 (6), p.910-931

2013

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Analytical strategies for phosphoproteomics

Proteomics (Weinheim), 2009-03, Vol.9 (6), p.1451-1468

2009

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Depolarization-dependent Induction of Site-specific Changes in Sialylation on N-linked Glycoproteins in Rat Nerve Terminals

Molecular & cellular proteomics, 2020-09, Vol.19 (9), p.1418-1435

2020

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Convergent Akt activation drives acquired EGFR inhibitor resistance in lung cancer

Nature communications, 2017-09, Vol.8 (1), p.410-14, Article 410

2017

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First-trimester proteomic profiling identifies novel predictors of gestational diabetes mellitus

PloS one, 2019-03, Vol.14 (3), p.e0214457-e0214457

2019

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SIMAC (Sequential Elution from IMAC), a Phosphoproteomics Strategy for the Rapid Separation of Monophosphorylated from Multiply Phosphorylated Peptides

Molecular & cellular proteomics, 2008-04, Vol.7 (4), p.661-671

2008

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Mass-spectrometric analysis of APOB polymorphism rs1042031 (G/T) and its influence on serum proteome of coronary artery disease patients: genetic-derived proteomics consequences

Molecular and cellular biochemistry, 2024-06, Vol.479 (6), p.1349-1361

2024

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Highly Selective Enrichment of Phosphorylated Peptides from Peptide Mixtures Using Titanium Dioxide Microcolumns

Molecular & cellular proteomics, 2005-07, Vol.4 (7), p.873-886

2005

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Evaluation of the impact of some experimental procedures on different phosphopeptide enrichment techniques

Rapid communications in mass spectrometry, 2007-11, Vol.21 (22), p.3635-3645

2007

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Quantitative proteomics of fractionated membrane and lumen exosome proteins from isogenic metastatic and nonmetastatic bladder cancer cells reveal differential expression of EMT factors

Proteomics (Weinheim), 2014-03, Vol.14 (6), p.699-712

2014

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Characterizing disease-associated changes in post-translational modifications by mass spectrometry

Expert review of proteomics, 2018-03, Vol.15 (3), p.245-258

2018

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Highly selective enrichment of phosphorylated peptides using titanium dioxide

Nature protocols, 2006-11, Vol.1 (4), p.1929-1935

2006

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Divalent Metal Transporter 1 Knock-Down Modulates IL-1β Mediated Pancreatic Beta-Cell Pro-Apoptotic Signaling Pathways through the Autophagic Machinery

International journal of molecular sciences, 2021-08, Vol.22 (15), p.8013

2021

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Standardization and harmonization of distributed multi-center proteotype analysis supporting precision medicine studies

Nature communications, 2020-10, Vol.11 (1), p.5248-5248, Article 5248

2020

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Resolution of NASH and hepatic fibrosis by the GLP-1R/GcgR dual-agonist Cotadutide via modulating mitochondrial function and lipogenesis

Nature metabolism, 2020-05, Vol.2 (5), p.413-431

2020

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Simultaneous Glycan-Peptide Characterization Using Hydrophilic Interaction Chromatography and Parallel Fragmentation by CID, Higher Energy Collisional Dissociation, and Electron Transfer Dissociation MS Applied to the N-Linked Glycoproteome of Campylobacter jejuni

Molecular & cellular proteomics, 2011-02, Vol.10 (2), p.S1-S18

2011

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TiSH — a robust and sensitive global phosphoproteomics strategy employing a combination of TiO2, SIMAC, and HILIC

Journal of proteomics, 2012-10, Vol.75 (18), p.5749-5761

2012

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Orthologous proteins of experimental de- and remyelination are differentially regulated in the CSF proteome of multiple sclerosis subtypes

PloS one, 2018-08, Vol.13 (8), p.e0202530-e0202530

2018

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Glutamate-glutamine homeostasis is perturbed in neurons and astrocytes derived from patient iPSC models of frontotemporal dementia

Molecular brain, 2020-09, Vol.13 (1), p.125-125, Article 125

2020

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Proteomic changes during experimental de- and remyelination in the corpus callosum

PloS one, 2020-04, Vol.15 (4), p.e0230249-e0230249

2020

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Beta cell dysfunction induced by bone morphogenetic protein (BMP)-2 is associated with histone modifications and decreased NeuroD1 chromatin binding

Cell death & disease, 2023-07, Vol.14 (7), p.399-399, Article 399

2023

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Exploring the Sialiome Using Titanium Dioxide Chromatography and Mass Spectrometry

Molecular & cellular proteomics, 2007-10, Vol.6 (10), p.1778-1787

2007

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Distinct urinary glycoprotein signatures in prostate cancer patients

Oncotarget, 2018-09, Vol.9 (69), p.33077-33097

2018

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Proteomic Identification of Putative MicroRNA394 Target Genes in Arabidopsis thaliana Identifies Major Latex Protein Family Members Critical for Normal Development

Molecular & cellular proteomics, 2016-06, Vol.15 (6), p.2033-2047

2016

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Effect of APOB polymorphism rs562338 (G/A) on serum proteome of coronary artery disease patients: a "proteogenomic" approach

Scientific reports, 2021-11, Vol.11 (1), p.22766-22766, Article 22766

2021

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Technologies and challenges in large-scale phosphoproteomics

Analytical strategies for phosphoproteomics

Depolarization-dependent Induction of Site-specific Changes in Sialylation on N-linked Glycoproteins in Rat Nerve Terminals

Convergent Akt activation drives acquired EGFR inhibitor resistance in lung cancer

First-trimester proteomic profiling identifies novel predictors of gestational diabetes mellitus

SIMAC (Sequential Elution from IMAC), a Phosphoproteomics Strategy for the Rapid Separation of Monophosphorylated from Multiply Phosphorylated Peptides

Mass-spectrometric analysis of APOB polymorphism rs1042031 (G/T) and its influence on serum proteome of coronary artery disease patients: genetic-derived proteomics consequences

Highly Selective Enrichment of Phosphorylated Peptides from Peptide Mixtures Using Titanium Dioxide Microcolumns

Evaluation of the impact of some experimental procedures on different phosphopeptide enrichment techniques

Quantitative proteomics of fractionated membrane and lumen exosome proteins from isogenic metastatic and nonmetastatic bladder cancer cells reveal differential expression of EMT factors

Characterizing disease-associated changes in post-translational modifications by mass spectrometry

Highly selective enrichment of phosphorylated peptides using titanium dioxide

Divalent Metal Transporter 1 Knock-Down Modulates IL-1β Mediated Pancreatic Beta-Cell Pro-Apoptotic Signaling Pathways through the Autophagic Machinery

Standardization and harmonization of distributed multi-center proteotype analysis supporting precision medicine studies

Resolution of NASH and hepatic fibrosis by the GLP-1R/GcgR dual-agonist Cotadutide via modulating mitochondrial function and lipogenesis

Simultaneous Glycan-Peptide Characterization Using Hydrophilic Interaction Chromatography and Parallel Fragmentation by CID, Higher Energy Collisional Dissociation, and Electron Transfer Dissociation MS Applied to the N-Linked Glycoproteome of Campylobacter jejuni

TiSH — a robust and sensitive global phosphoproteomics strategy employing a combination of TiO2, SIMAC, and HILIC

Orthologous proteins of experimental de- and remyelination are differentially regulated in the CSF proteome of multiple sclerosis subtypes

Glutamate-glutamine homeostasis is perturbed in neurons and astrocytes derived from patient iPSC models of frontotemporal dementia

Proteomic changes during experimental de- and remyelination in the corpus callosum

Beta cell dysfunction induced by bone morphogenetic protein (BMP)-2 is associated with histone modifications and decreased NeuroD1 chromatin binding

Exploring the Sialiome Using Titanium Dioxide Chromatography and Mass Spectrometry

Distinct urinary glycoprotein signatures in prostate cancer patients

Proteomic Identification of Putative MicroRNA394 Target Genes in Arabidopsis thaliana Identifies Major Latex Protein Family Members Critical for Normal Development

Effect of APOB polymorphism rs562338 (G/A) on serum proteome of coronary artery disease patients: a "proteogenomic" approach

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