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A robustness metric for biological data clustering algorithms

BMC bioinformatics, 2019-12, Vol.20 (Suppl 15), p.503-503, Article 503

2019

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DNA methylation changes separate allergic patients from healthy controls and may reflect altered CD4+ T-cell population structure

PLoS genetics, 2014-01, Vol.10 (1), p.e1004059-e1004059

2014

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Domination based classification algorithms for the controllability analysis of biological interaction networks

Scientific reports, 2022-07, Vol.12 (1), p.11897-11897, Article 11897

2022

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Detecting Differential and Correlated Protein Expression in Label-Free Shotgun Proteomics

Journal of proteome research, 2006-11, Vol.5 (11), p.2909-2918

2006

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Biclique: an R package for maximal biclique enumeration in bipartite graphs

BMC research notes, 2020-02, Vol.13 (1), p.88-5, Article 88

2020

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Molecular Subtyping and Outlier Detection in Human Disease Using the Paraclique Algorithm

Algorithms, 2021-02, Vol.14 (2), p.63

2021

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Integration of heterogeneous functional genomics data in gerontology research to find genes and pathway underlying aging across species

PloS one, 2019-04, Vol.14 (4), p.e0214523-e0214523

2019

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Genetic dissection of acute ethanol responsive gene networks in prefrontal cortex: functional and mechanistic implications

PloS one, 2012-04, Vol.7 (4), p.e33575

2012

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The maximum clique enumeration problem: algorithms, applications, and implementations

BMC bioinformatics, 2012-06, Vol.13 Suppl 10 (Suppl 10), p.S5-S5, Article S5

2012

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Social determinants and the classification of disease: descriptive epidemiology of selected socially mediated disease constellations

PloS one, 2014-11, Vol.9 (11), p.e110271-e110271

2014

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On Finding and Enumerating Maximal and Maximum k -Partite Cliques in k -Partite Graphs

Algorithms, 2019-01, Vol.12 (1), p.23

2019

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Genome-wide DNA methylation analysis reveals loci that distinguish different types of adipose tissue in obese individuals

Clinical epigenetics, 2017-05, Vol.9 (1), p.48-48, Article 48

2017

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Association of Cardiovascular Disease and Long-Term Exposure to Fine Particulate Matter (PM2.5) in the Southeastern United States

Atmosphere, 2021-08, Vol.12 (8), p.947

2021

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A Comparative Study of Gene Co-Expression Thresholding Algorithms

Journal of computational biology, 2024-06, Vol.31 (6), p.539-548

2024

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Crown Structures for Vertex Cover Kernelization

Theory of computing systems, 2007-10, Vol.41 (3), p.411-430

2007

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On finding bicliques in bipartite graphs: a novel algorithm and its application to the integration of diverse biological data types

BMC bioinformatics, 2014-04, Vol.15 (1), p.110-110, Article 110

2014

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Extracting gene networks for low-dose radiation using graph theoretical algorithms

PLoS computational biology, 2006-07, Vol.2 (7), p.e89

2006

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Cross-Species Integrative Functional Genomics in GeneWeaver Reveals a Role for Pafah1b1 in Altered Response to Alcohol

Frontiers in behavioral neuroscience, 2016-01, Vol.10, p.1-1

2016

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A graph theoretical approach to experimental prioritization in genome-scale investigations

Mammalian genome, 2024-12, Vol.35 (4), p.724-733

2024

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Threshold selection in gene co-expression networks using spectral graph theory techniques

BMC bioinformatics, 2009-10, Vol.10 Suppl 11 (S11), p.S4-S4, Article S4

2009

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EHR-BERT: A BERT-based model for effective anomaly detection in electronic health records

Journal of biomedical informatics, 2024-02, Vol.150 (1), p.104605-104605, Article 104605

2024

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Highly interconnected genes in disease-specific networks are enriched for disease-associated polymorphisms

Genome Biology, 2012-06, Vol.13 (6), p.R46-R46, Article R46

2012

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Seminar: Scalable Preprocessing Tools for Exposomic Data Analysis

Environmental health perspectives, 2023-12, Vol.131 (12), p.124201-124201

2023

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The public health exposome: a population-based, exposure science approach to health disparities research

International journal of environmental research and public health, 2014-12, Vol.11 (12), p.12866-12895

2014

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Comparison of threshold selection methods for microarray gene co-expression matrices

BMC research notes, 2009-12, Vol.2 (1), p.240-240

2009

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A robustness metric for biological data clustering algorithms

DNA methylation changes separate allergic patients from healthy controls and may reflect altered CD4+ T-cell population structure

Domination based classification algorithms for the controllability analysis of biological interaction networks

Detecting Differential and Correlated Protein Expression in Label-Free Shotgun Proteomics

Biclique: an R package for maximal biclique enumeration in bipartite graphs

Molecular Subtyping and Outlier Detection in Human Disease Using the Paraclique Algorithm

Integration of heterogeneous functional genomics data in gerontology research to find genes and pathway underlying aging across species

Genetic dissection of acute ethanol responsive gene networks in prefrontal cortex: functional and mechanistic implications

The maximum clique enumeration problem: algorithms, applications, and implementations

Social determinants and the classification of disease: descriptive epidemiology of selected socially mediated disease constellations

On Finding and Enumerating Maximal and Maximum k -Partite Cliques in k -Partite Graphs

Genome-wide DNA methylation analysis reveals loci that distinguish different types of adipose tissue in obese individuals

Association of Cardiovascular Disease and Long-Term Exposure to Fine Particulate Matter (PM2.5) in the Southeastern United States

A Comparative Study of Gene Co-Expression Thresholding Algorithms

Crown Structures for Vertex Cover Kernelization

On finding bicliques in bipartite graphs: a novel algorithm and its application to the integration of diverse biological data types

Extracting gene networks for low-dose radiation using graph theoretical algorithms

Cross-Species Integrative Functional Genomics in GeneWeaver Reveals a Role for Pafah1b1 in Altered Response to Alcohol

A graph theoretical approach to experimental prioritization in genome-scale investigations

Threshold selection in gene co-expression networks using spectral graph theory techniques

EHR-BERT: A BERT-based model for effective anomaly detection in electronic health records

Highly interconnected genes in disease-specific networks are enriched for disease-associated polymorphisms

Seminar: Scalable Preprocessing Tools for Exposomic Data Analysis

The public health exposome: a population-based, exposure science approach to health disparities research

Comparison of threshold selection methods for microarray gene co-expression matrices

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