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Improving the phenotype predictions of a yeast genome‐scale metabolic model by incorporating enzymatic constraints

Molecular systems biology, 2017-08, Vol.13 (8), p.935-n/a

2017

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C/N ratio and carbon source-dependent lipid production profiling in Rhodotorula toruloides

Applied microbiology and biotechnology, 2020-03, Vol.104 (6), p.2639-2649

2020

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Cell‐Laden Hydrogels for Multikingdom 3D Printing

Macromolecular bioscience, 2020-08, Vol.20 (8), p.e2000121-n/a

2020

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Genome-scale metabolic modeling reveals metabolic trade-offs associated with lipid production in Rhodotorula toruloides

PLoS computational biology, 2023-04, Vol.19 (4), p.e1011009-e1011009

2023

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Benchmarking accuracy and precision of intensity‐based absolute quantification of protein abundances in Saccharomyces cerevisiae

Proteomics (Weinheim), 2021-03, Vol.21 (6), p.e2000093-n/a

2021

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Absolute Quantification of Protein and mRNA Abundances Demonstrate Variability in Gene-Specific Translation Efficiency in Yeast

Cell systems, 2017-05, Vol.4 (5), p.495-504.e5

2017

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A Conundrum of r-Protein Stability: Unbalanced Stoichiometry of r-Proteins during Stationary Phase in Escherichia coli

mBio, 2022-10, Vol.13 (5), p.e0187322-e0187322

2022

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The yeast osmostress response is carbon source dependent

Scientific reports, 2017-04, Vol.7 (1), p.990-11, Article 990

2017

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Benchmarking accuracy and precision of intensity‐based absolute quantification of protein abundances in Saccharomyces cerevisiae

Proteomics (Weinheim), 2021-08, Vol.21 (15), p.e2170095-n/a

2021

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Applications of computational modeling in metabolic engineering of yeast

FEMS yeast research, 2015-02, Vol.15 (1), p.1-13

2015

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Exploring the resilience and stability of a defined human gut microbiota consortium: An isothermal microcalorimetric study

MicrobiologyOpen (Weinheim), 2024-08, Vol.13 (4), p.e1430-n/a

2024

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Potassium and Sodium Salt Stress Characterization in the Yeasts Saccharomyces cerevisiae, Kluyveromyces marxianus, and Rhodotorula toruloides

Applied and environmental microbiology, 2021-06, Vol.87 (13), p.e0310020-e0310020

2021

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Xylose Metabolism and the Effect of Oxidative Stress on Lipid and Carotenoid Production in Rhodotorula toruloides : Insights for Future Biorefinery

Frontiers in bioengineering and biotechnology, 2020-08, Vol.8, p.1008-1008

2020

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Protein turnover forms one of the highest maintenance costs in Lactococcus lactis

Microbiology (Society for General Microbiology), 2014-07, Vol.160 (Pt 7), p.1501-1512

2014

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Screening and Growth Characterization of Non-conventional Yeasts in a Hemicellulosic Hydrolysate

Frontiers in bioengineering and biotechnology, 2021-04, Vol.9, p.659472-659472

2021

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Development of a dedicated Golden Gate Assembly Platform (RtGGA) for Rhodotorula toruloides

Metabolic engineering communications, 2022-12, Vol.15, p.e00200-e00200, Article e00200

2022

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Specific growth rate dependent transcriptome profiling of Escherichia coli K12 MG1655 in accelerostat cultures

Journal of biotechnology, 2010, Vol.145 (1), p.60-65

2010

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Multi-omics approach to study the growth efficiency and amino acid metabolism in Lactococcus lactis at various specific growth rates

Microbial cell factories, 2011-02, Vol.10 (1), p.12-12, Article 12

2011

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Systems biology approach reveals that overflow metabolism of acetate in Escherichia coli is triggered by carbon catabolite repression of acetyl-CoA synthetase

BMC systems biology, 2010-12, Vol.4 (1), p.166-166, Article 166

2010

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Adaptation to different types of stress converge on mitochondrial metabolism

Molecular biology of the cell, 2016-08, Vol.27 (15), p.2505-2514

2016

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Detailed analysis of metabolism reveals growth-rate-promoting interactions between Anaerostipes caccae and Bacteroides spp

Anaerobe, 2023-02, Vol.79, p.102680-102680, Article 102680

2023

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Evaluation of enzyme-constrained genome-scale model through metabolic engineering of anaerobic co-production of 2,3-butanediol and glycerol by Saccharomyces cerevisiae

Metabolic engineering, 2024-03, Vol.82, p.49-59

2024

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Transcriptome analysis of the thermotolerant yeast Kluyveromyces marxianus CCT 7735 under ethanol stress

Applied microbiology and biotechnology, 2017-09, Vol.101 (18), p.6969-6980

2017

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Physical Confinement Impacts Cellular Phenotypes within Living Materials

ACS applied bio materials, 2020-07, Vol.3 (7), p.4273-4281

2020

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Correction to: Transcriptome analysis of the thermotolerant yeast Kluyveromyces marxianus CCT 7735 under ethanol stress

Applied microbiology and biotechnology, 2021-03, Vol.105 (6), p.2613-2613

2021

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Improving the phenotype predictions of a yeast genome‐scale metabolic model by incorporating enzymatic constraints

C/N ratio and carbon source-dependent lipid production profiling in Rhodotorula toruloides

Cell‐Laden Hydrogels for Multikingdom 3D Printing

Genome-scale metabolic modeling reveals metabolic trade-offs associated with lipid production in Rhodotorula toruloides

Benchmarking accuracy and precision of intensity‐based absolute quantification of protein abundances in Saccharomyces cerevisiae

Absolute Quantification of Protein and mRNA Abundances Demonstrate Variability in Gene-Specific Translation Efficiency in Yeast

A Conundrum of r-Protein Stability: Unbalanced Stoichiometry of r-Proteins during Stationary Phase in Escherichia coli

The yeast osmostress response is carbon source dependent

Benchmarking accuracy and precision of intensity‐based absolute quantification of protein abundances in Saccharomyces cerevisiae

Applications of computational modeling in metabolic engineering of yeast

Exploring the resilience and stability of a defined human gut microbiota consortium: An isothermal microcalorimetric study

Potassium and Sodium Salt Stress Characterization in the Yeasts Saccharomyces cerevisiae, Kluyveromyces marxianus, and Rhodotorula toruloides

Xylose Metabolism and the Effect of Oxidative Stress on Lipid and Carotenoid Production in Rhodotorula toruloides : Insights for Future Biorefinery

Protein turnover forms one of the highest maintenance costs in Lactococcus lactis

Screening and Growth Characterization of Non-conventional Yeasts in a Hemicellulosic Hydrolysate

Development of a dedicated Golden Gate Assembly Platform (RtGGA) for Rhodotorula toruloides

Specific growth rate dependent transcriptome profiling of Escherichia coli K12 MG1655 in accelerostat cultures

Multi-omics approach to study the growth efficiency and amino acid metabolism in Lactococcus lactis at various specific growth rates

Systems biology approach reveals that overflow metabolism of acetate in Escherichia coli is triggered by carbon catabolite repression of acetyl-CoA synthetase

Adaptation to different types of stress converge on mitochondrial metabolism

Detailed analysis of metabolism reveals growth-rate-promoting interactions between Anaerostipes caccae and Bacteroides spp

Evaluation of enzyme-constrained genome-scale model through metabolic engineering of anaerobic co-production of 2,3-butanediol and glycerol by Saccharomyces cerevisiae

Transcriptome analysis of the thermotolerant yeast Kluyveromyces marxianus CCT 7735 under ethanol stress

Physical Confinement Impacts Cellular Phenotypes within Living Materials

Correction to: Transcriptome analysis of the thermotolerant yeast Kluyveromyces marxianus CCT 7735 under ethanol stress

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