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@TOME-2: a new pipeline for comparative modeling of protein-ligand complexes

Nucleic acids research, 2009-07, Vol.37 (Web Server issue), p.W485-W491

2009

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The Leishmania nicotinamidase is essential for NAD+ production and parasite proliferation

Molecular microbiology, 2011-10, Vol.82 (1), p.21-38

2011

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Synthesis of aminophenylhydroxamate and aminobenzylhydroxamate derivatives and in vitro screening for antiparasitic and histone deacetylase inhibitory activity

International journal for parasitology -- drugs and drug resistance, 2018-04, Vol.8 (1), p.59-66

2018

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Deciphering protein sequence information through hydrophobic cluster analysis (HCA): current status and perspectives

Cellular and molecular life sciences : CMLS, 1997-09, Vol.53 (8), p.621-645

1997

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Structural and Functional Analysis of the C-terminal STAS (Sulfate Transporter and Anti-sigma Antagonist) Domain of the Arabidopsis thaliana Sulfate Transporter SULTR1.2

The Journal of biological chemistry, 2005-04, Vol.280 (16), p.15976-15983

2005

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Easier threading through web-based comparisons and cross-validations

Bioinformatics, 2001-08, Vol.17 (8), p.752-753

2001

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Structural and molecular characterization of the aminoglycoside phosphotransferase APH(3')-IIb from Pseudomonas aeruginosa

Acta crystallographica. Section A, Foundations and advances, 2022-08, Vol.78 (a2), p.e349-e349

2022

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Ligand-induced fit in mycobacterial MabA: The sequence-specific C-terminus locks the conformational change

Proteins, structure, function, and bioinformatics, 2005-08, Vol.60 (3), p.392-400

2005

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LEA3D: A Computer-Aided Ligand Design for Structure-Based Drug Design

Journal of medicinal chemistry, 2005-04, Vol.48 (7), p.2457-2468

2005

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MulBlast 1.0: a multiple alignment of BLAST output to boost protein sequence similarity analysis

Bioinformatics, 1996-12, Vol.12 (6), p.463-467

Labesse, G

1996

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ViTO: tool for refinement of protein sequence–structure alignments

Bioinformatics, 2004-12, Vol.20 (18), p.3694-3696

2004

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P-SEA: a new efficient assignment of secondary structure from C alpha trace of proteins

Bioinformatics, 1997-06, Vol.13 (3), p.291-295

1997

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Incremental threading optimization (TITO) to help alignment and modelling of remote homologues

Bioinformatics (Oxford, England), 1998, Vol.14 (2), p.206-211

1998

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Janus kinases and focal adhesion kinases play in the 4.1 band: a superfamily of band 4.1 domains important for cell structure and signal transduction

Molecular medicine (Cambridge, Mass.), 1998-12, Vol.4 (12), p.751-769

1998

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Biochemical Characterization of the Helper Component of Cauliflower Mosaic Virus

Journal of Virology, 2001-09, Vol.75 (18), p.8538-8546

2001

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No ligand binding in the GB2 subunit of the GABA(B) receptor is required for activation and allosteric interaction between the subunits

The Journal of neuroscience, 2002-09, Vol.22 (17), p.7352

2002

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Flavohaemoglobin HmpX: a new pathogenicity determinant in Erwinia chrysanthemi strain 3937

Microbiology (Society for General Microbiology), 1995-04, Vol.141 ( Pt 4) (4), p.863-871

1995

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Structural comparisons lead to the definition of a new superfamily of NAD(P)(H)-accepting oxidoreductases: the single-domain reductases/epimerases/dehydrogenases (the 'RED' family)

Biochemical journal, 1994-11, Vol.304 ( Pt 1) (1), p.95-99

1994

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From sequence to structure to function: a case study

Enzyme and microbial technology, 2002-03, Vol.30 (3), p.289-294

2002

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C-Terminal Domain of the Virulence Factor MgtC Is a Divergent ACT Domain

Journal of Bacteriology, 2012-11, Vol.194 (22), p.6255-6263

2012

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Design of Mycobacterium tuberculosis Thymidine Monophosphate Kinase Inhibitors

Nucleosides, nucleotides & nucleic acids, 2003-10, Vol.22 (5-8), p.801-804

2003

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Endonuclease Domain of Bacteriophage Terminases Belongs to the Resolvase/Integrase/Ribonuclease H Superfamily: A BIOINFORMATICS ANALYSIS VALIDATED BY A FUNCTIONAL STUDY ON BACTERIOPHAGE T5

The Journal of biological chemistry, 2006-03, Vol.281 (9), p.5829-5836

2006

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Crystal Structure of MabA from Mycobacterium tuberculosis, a Reductase involved in Long-chain Fatty Acid Biosynthesis

Journal of molecular biology, 2002-07, Vol.320 (2), p.249-261

2002

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Ssu72 is a phosphatase essential for transcription termination of snoRNAs and specific mRNAs in yeast

The EMBO journal, 2003-04, Vol.22 (7), p.1588-1598

2003

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kinDOCK: a tool for comparative docking of protein kinase ligands

Nucleic acids research, 2006-07, Vol.34 (Web Server issue), p.W325-W329

2006

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@TOME-2: a new pipeline for comparative modeling of protein-ligand complexes

The Leishmania nicotinamidase is essential for NAD+ production and parasite proliferation

Synthesis of aminophenylhydroxamate and aminobenzylhydroxamate derivatives and in vitro screening for antiparasitic and histone deacetylase inhibitory activity

Deciphering protein sequence information through hydrophobic cluster analysis (HCA): current status and perspectives

Structural and Functional Analysis of the C-terminal STAS (Sulfate Transporter and Anti-sigma Antagonist) Domain of the Arabidopsis thaliana Sulfate Transporter SULTR1.2

Easier threading through web-based comparisons and cross-validations

Structural and molecular characterization of the aminoglycoside phosphotransferase APH(3')-IIb from Pseudomonas aeruginosa

Ligand-induced fit in mycobacterial MabA: The sequence-specific C-terminus locks the conformational change

LEA3D: A Computer-Aided Ligand Design for Structure-Based Drug Design

MulBlast 1.0: a multiple alignment of BLAST output to boost protein sequence similarity analysis

ViTO: tool for refinement of protein sequence–structure alignments

P-SEA: a new efficient assignment of secondary structure from C alpha trace of proteins

Incremental threading optimization (TITO) to help alignment and modelling of remote homologues

Janus kinases and focal adhesion kinases play in the 4.1 band: a superfamily of band 4.1 domains important for cell structure and signal transduction

Biochemical Characterization of the Helper Component of Cauliflower Mosaic Virus

No ligand binding in the GB2 subunit of the GABA(B) receptor is required for activation and allosteric interaction between the subunits

Flavohaemoglobin HmpX: a new pathogenicity determinant in Erwinia chrysanthemi strain 3937

Structural comparisons lead to the definition of a new superfamily of NAD(P)(H)-accepting oxidoreductases: the single-domain reductases/epimerases/dehydrogenases (the 'RED' family)

From sequence to structure to function: a case study

C-Terminal Domain of the Virulence Factor MgtC Is a Divergent ACT Domain

Design of Mycobacterium tuberculosis Thymidine Monophosphate Kinase Inhibitors

Endonuclease Domain of Bacteriophage Terminases Belongs to the Resolvase/Integrase/Ribonuclease H Superfamily: A BIOINFORMATICS ANALYSIS VALIDATED BY A FUNCTIONAL STUDY ON BACTERIOPHAGE T5

Crystal Structure of MabA from Mycobacterium tuberculosis, a Reductase involved in Long-chain Fatty Acid Biosynthesis

Ssu72 is a phosphatase essential for transcription termination of snoRNAs and specific mRNAs in yeast

kinDOCK: a tool for comparative docking of protein kinase ligands

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