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A high-resolution protein architecture of the budding yeast genome

Nature (London), 2021-04, Vol.592 (7853), p.309-314

2021

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Constructing structural networks of signaling pathways on the proteome scale

Current opinion in structural biology, 2012-06, Vol.22 (3), p.367-377

2012

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Exploiting Conformational Ensembles in Modeling Protein–Protein Interactions on the Proteome Scale

Journal of proteome research, 2013-06, Vol.12 (6), p.2641-2653

2013

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Selective Ah receptor modulators attenuate NPC1L1-mediated cholesterol uptake through repression of SREBP-2 transcriptional activity

Laboratory investigation, 2020-02, Vol.100 (2), p.250-264

2020

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"3D, human renal proximal tubule (RPTEC-TERT1) organoids 'tubuloids' for translatable evaluation of nephrotoxins in high-throughput"

PloS one, 2022-11, Vol.17 (11), p.e0277937

2022

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"3D, human renal proximal tubule (RPTEC-TERT1) organoids 'tubuloids' for translatable evaluation of nephrotoxins in high-throughput"

PloS one, 2022-11, Vol.17 (11), p.e0277937

2022

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Enhanced chromatin accessibility of the dosage compensated Drosophila male X-chromosome requires the CLAMP zinc finger protein

PloS one, 2017-10, Vol.12 (10), p.e0186855

2017

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The Drosophila CLAMP protein associates with diverse proteins on chromatin

PloS one, 2017-12, Vol.12 (12), p.e0189772-e0189772

2017

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Dietary broccoli impacts microbial community structure and attenuates chemically induced colitis in mice in an Ah receptor dependent manner

Journal of functional foods, 2017-10, Vol.37, p.685-698

2017

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The structural network of Interleukin-10 and its implications in inflammation and cancer

BMC genomics, 2014-05, Vol.15 Suppl 4 (S4), p.S2-S2, Article S2

2014

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Expansion of GA Dinucleotide Repeats Increases the Density of CLAMP Binding Sites on the X-Chromosome to Promote Drosophila Dosage Compensation

PLoS genetics, 2016-07, Vol.12 (7), p.e1006120-e1006120

2016

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Protein-protein interfaces integrated into interaction networks: implications on drug design

Current pharmaceutical design, 2012, Vol.18 (30), p.4697-4705

2012

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A high throughput cell stretch device for investigating mechanobiology in vitro

APL bioengineering, 2024-06, Vol.8 (2), p.026129-026129-13

2024

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Chromatin accessibility of the dosage compensated Drosophila male X‐chromosome is established by a context‐specific role for the CLAMP zinc finger protein

The FASEB journal, 2017-04, Vol.31 (S1)

2017

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Resolving Heart Regeneration by Replacement Histone Profiling

Developmental cell, 2017-02, Vol.40 (4), p.392-404.e5

2017

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PRISM-EM: template interface-based modelling of multi-protein complexes guided by cryo-electron microscopy density maps

Acta crystallographica. Section D, Biological crystallography., 2016-10, Vol.72 (10), p.1137-1148

2016

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"3D, human renal proximal tubule

PloS one, 2022-11, Vol.17 (11), p.e0277937

2022

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Compound Activity Prediction with Dose-Dependent Transcriptomic Profiles and Deep Learning

Journal of chemical information and modeling, 2024-04, Vol.64 (7), p.2695-2704

2024

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PRISM‐EM: template interface‐based modelling of multi‐protein complexes guided by cryo‐electron microscopy density maps. Corrigendum

Acta crystallographica. Section D, Biological crystallography., 2018-01, Vol.74 (1), p.65-66

2018

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PRISM-EM : template interface-based modelling of multi-protein complexes guided by cryo-electron microscopy density maps. Corrigendum

Acta crystallographica. Section D, Structural biology, 2018-01, Vol.74 (1), p.65-66

2018

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Modeling Protein Assemblies in the Proteome

Molecular & cellular proteomics, 2014-03, Vol.13 (3), p.887-896

2014

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Histone locus regulation by the Drosophila dosage compensation adaptor protein CLAMP

Genes & development, 2017-07, Vol.31 (14), p.1494-1508

2017

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Regulated large-scale nucleosome density patterns and precise nucleosome positioning correlate with V(D)J recombination

Proceedings of the National Academy of Sciences - PNAS, 2016-10, Vol.113 (42), p.E6427-E6436

2016

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Ligand-mediated cytoplasmic retention of the Ah receptor inhibits macrophage-mediated acute inflammatory responses

Laboratory investigation, 2017-12, Vol.97 (12), p.1471-1487

2017

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Expanding the conformational selection paradigm in protein-ligand docking

Methods in molecular biology (Clifton, N.J.), 2012, Vol.819, p.59

2012

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A high-resolution protein architecture of the budding yeast genome

Constructing structural networks of signaling pathways on the proteome scale

Exploiting Conformational Ensembles in Modeling Protein–Protein Interactions on the Proteome Scale

Selective Ah receptor modulators attenuate NPC1L1-mediated cholesterol uptake through repression of SREBP-2 transcriptional activity

"3D, human renal proximal tubule (RPTEC-TERT1) organoids 'tubuloids' for translatable evaluation of nephrotoxins in high-throughput"

"3D, human renal proximal tubule (RPTEC-TERT1) organoids 'tubuloids' for translatable evaluation of nephrotoxins in high-throughput"

Enhanced chromatin accessibility of the dosage compensated Drosophila male X-chromosome requires the CLAMP zinc finger protein

The Drosophila CLAMP protein associates with diverse proteins on chromatin

Dietary broccoli impacts microbial community structure and attenuates chemically induced colitis in mice in an Ah receptor dependent manner

The structural network of Interleukin-10 and its implications in inflammation and cancer

Expansion of GA Dinucleotide Repeats Increases the Density of CLAMP Binding Sites on the X-Chromosome to Promote Drosophila Dosage Compensation

Protein-protein interfaces integrated into interaction networks: implications on drug design

A high throughput cell stretch device for investigating mechanobiology in vitro

Chromatin accessibility of the dosage compensated Drosophila male X‐chromosome is established by a context‐specific role for the CLAMP zinc finger protein

Resolving Heart Regeneration by Replacement Histone Profiling

PRISM-EM: template interface-based modelling of multi-protein complexes guided by cryo-electron microscopy density maps

"3D, human renal proximal tubule

Compound Activity Prediction with Dose-Dependent Transcriptomic Profiles and Deep Learning

PRISM‐EM: template interface‐based modelling of multi‐protein complexes guided by cryo‐electron microscopy density maps. Corrigendum

PRISM-EM : template interface-based modelling of multi-protein complexes guided by cryo-electron microscopy density maps. Corrigendum

Modeling Protein Assemblies in the Proteome

Histone locus regulation by the Drosophila dosage compensation adaptor protein CLAMP

Regulated large-scale nucleosome density patterns and precise nucleosome positioning correlate with V(D)J recombination

Ligand-mediated cytoplasmic retention of the Ah receptor inhibits macrophage-mediated acute inflammatory responses

Expanding the conformational selection paradigm in protein-ligand docking

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