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Artificial intelligence in fusion protein three‐dimensional structure prediction: Review and perspective

Clinical and translational medicine, 2024-08, Vol.14 (8), p.e1789-n/a

2024

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Abstract 2376 AI approaches for precision medicine of fusion oncogenes and oncoproteins

The Journal of biological chemistry, 2024-03, Vol.300 (3), p.106301, Article 106301

2024

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In-silico identification of inhibitors against mutated BCR-ABL protein of chronic myeloid leukemia: a virtual screening and molecular dynamics simulation study

Journal of biomolecular structure & dynamics, 2016-10, Vol.34 (10), p.2171-2183

2016

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Agrobiodiversity in changing shifting cultivation landscapes of the Indian Himalayas: An empirical assessment

Landscape and urban planning, 2022-04, Vol.220, p.104333, Article 104333

2022

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Cardiac and Skeletal Muscle Transcriptome Response to Heat Stress in Kenyan Chicken Ecotypes Adapted to Low and High Altitudes Reveal Differences in Thermal Tolerance and Stress Response

Frontiers in genetics, 2019-10, Vol.10, p.993-993

2019

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FusionAI, a DNA-sequence-based deep learning protocol reduces the false positives of human fusion gene prediction

STAR protocols, 2022-03, Vol.3 (1), p.101185-101185, Article 101185

2022

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Indigenous people’s attachment to shifting cultivation in the Eastern Himalayas, India: A cross-sectional evidence

Forest policy and economics, 2020-02, Vol.111, p.102046, Article 102046

2020

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Prediction of Hanwoo Cattle Phenotypes from Genotypes Using Machine Learning Methods

Animals (Basel), 2021-07, Vol.11 (7), p.2066

2021

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Compositional and Functional Characteristics of Swine Slurry Microbes through 16S rRNA Metagenomic Sequencing Approach

Animals (Basel), 2020-08, Vol.10 (8), p.1372

2020

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Genome-Wide Transcriptome and Metabolome Analyses Provide Novel Insights and Suggest a Sex-Specific Response to Heat Stress in Pigs

Genes, 2020-05, Vol.11 (5), p.540

2020

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Factors contributing to the Success of Aquaculture Field Schools

Journal of Extension Education (Online), 2020-10, Vol.32 (1), p.6441

2020

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Corrigendum: Cardiac and Skeletal Muscle Transcriptome Response to Heat Stress in Kenyan Chicken Ecotypes Adapted to Low and High Altitudes Reveal Differences in Thermal Tolerance and Stress Response

Frontiers in genetics, 2020-03, Vol.11, p.197-197

2020

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Comparison of Bacterial Populations in the Ceca of Swine at Two Different Stages and their Functional Annotations

Genes, 2019-05, Vol.10 (5), p.382

2019

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3D Structure Generation, Molecular Dynamics and Docking Studies of IRHOM2 Protein Involved in Cancer & Rheumatoid Arthritis

Current computer-aided drug design, 2015-12, Vol.11 (4), p.325

2015

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Molecular docking and dynamics simulation study of flavonoids as BET bromodomain inhibitors

Journal of biomolecular structure & dynamics, 2017-08, Vol.35 (11), p.2351-2362

2017

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FusionNW, a potential clinical impact assessment of kinases in pan-cancer fusion gene network

Briefings in bioinformatics, 2024-01, Vol.25 (2)

2024

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FusionNeoAntigen: a resource of fusion gene-specific neoantigens

Nucleic acids research, 2024-01, Vol.52 (D1), p.D1276

2024

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FusionPDB: a knowledgebase of human fusion proteins

Nucleic acids research, 2024-01, Vol.52 (D1), p.D1289

2024

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Genome-wide analysis of miRNAs and Tasi-RNAs in Zea mays in response to phosphate deficiency

Functional & integrative genomics, 2017-05, Vol.17 (2-3), p.335-351

2017

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Systematic investigation of the homology sequences around the human fusion gene breakpoints in pan-cancer – bioinformatics study for a potential link to MMEJ

Briefings in bioinformatics, 2023-09, Vol.24 (5)

2023

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Yield gaps in composite carp culture in eastern India

Aquaculture international, 2021-08, Vol.29 (4), p.1843-1851

2021

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Exploring dual inhibitors for STAT1 and STAT5 receptors utilizing virtual screening and dynamics simulation validation

Journal of biomolecular structure & dynamics, 2016-10, Vol.34 (10), p.2115-2129

2016

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Whole metagenome sequencing of cecum microbiomes in Ethiopian indigenous chickens from two different altitudes reveals antibiotic resistance genes

Genomics (San Diego, Calif.), 2020-03, Vol.112 (2), p.1988-1999

2020

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Novel DOT1L ReceptorNatural Inhibitors Involved in Mixed Lineage Leukemia: a Virtual Screening, Molecular Docking and Dynamics Simulation Study

Asian Pacific journal of cancer prevention : APJCP, 2015-05, Vol.16 (9), p.3817-3825

2015

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Exploration of new drug-like inhibitors for serine/threonine protein phosphatase 5 of Plasmodium falciparum: a docking and simulation study

Journal of biomolecular structure & dynamics, 2015-11, Vol.33 (11), p.2421-2441

2015

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Artificial intelligence in fusion protein three‐dimensional structure prediction: Review and perspective

Abstract 2376 AI approaches for precision medicine of fusion oncogenes and oncoproteins

In-silico identification of inhibitors against mutated BCR-ABL protein of chronic myeloid leukemia: a virtual screening and molecular dynamics simulation study

Agrobiodiversity in changing shifting cultivation landscapes of the Indian Himalayas: An empirical assessment

Cardiac and Skeletal Muscle Transcriptome Response to Heat Stress in Kenyan Chicken Ecotypes Adapted to Low and High Altitudes Reveal Differences in Thermal Tolerance and Stress Response

FusionAI, a DNA-sequence-based deep learning protocol reduces the false positives of human fusion gene prediction

Indigenous people’s attachment to shifting cultivation in the Eastern Himalayas, India: A cross-sectional evidence

Prediction of Hanwoo Cattle Phenotypes from Genotypes Using Machine Learning Methods

Compositional and Functional Characteristics of Swine Slurry Microbes through 16S rRNA Metagenomic Sequencing Approach

Genome-Wide Transcriptome and Metabolome Analyses Provide Novel Insights and Suggest a Sex-Specific Response to Heat Stress in Pigs

Factors contributing to the Success of Aquaculture Field Schools

Corrigendum: Cardiac and Skeletal Muscle Transcriptome Response to Heat Stress in Kenyan Chicken Ecotypes Adapted to Low and High Altitudes Reveal Differences in Thermal Tolerance and Stress Response

Comparison of Bacterial Populations in the Ceca of Swine at Two Different Stages and their Functional Annotations

3D Structure Generation, Molecular Dynamics and Docking Studies of IRHOM2 Protein Involved in Cancer & Rheumatoid Arthritis

Molecular docking and dynamics simulation study of flavonoids as BET bromodomain inhibitors

FusionNW, a potential clinical impact assessment of kinases in pan-cancer fusion gene network

FusionNeoAntigen: a resource of fusion gene-specific neoantigens

FusionPDB: a knowledgebase of human fusion proteins

Genome-wide analysis of miRNAs and Tasi-RNAs in Zea mays in response to phosphate deficiency

Systematic investigation of the homology sequences around the human fusion gene breakpoints in pan-cancer – bioinformatics study for a potential link to MMEJ

Yield gaps in composite carp culture in eastern India

Exploring dual inhibitors for STAT1 and STAT5 receptors utilizing virtual screening and dynamics simulation validation

Whole metagenome sequencing of cecum microbiomes in Ethiopian indigenous chickens from two different altitudes reveals antibiotic resistance genes

Novel DOT1L ReceptorNatural Inhibitors Involved in Mixed Lineage Leukemia: a Virtual Screening, Molecular Docking and Dynamics Simulation Study

Exploration of new drug-like inhibitors for serine/threonine protein phosphatase 5 of Plasmodium falciparum: a docking and simulation study

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