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Time-resolved methods in biophysics. 9. Laser temperature-jump methods for investigating biomolecular dynamics

Photochemical & photobiological sciences, 2009-04, Vol.8 (4), p.499-512

Kubelka, Jan

2009

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Liquid-Vapor Interfacial Tension in Alkane Mixtures: Improving Predictive Capabilities of Molecular Dynamics Simulations

The journal of physical chemistry. B, 2022-02, Vol.126 (5), p.1136-1146

2022

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Ligand Induced Circular Dichroism and Circularly Polarized Luminescence in CdSe Quantum Dots

ACS nano, 2013-12, Vol.7 (12), p.11094-11102

2013

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Effect of Mutations on the Global and Site-Specific Stability and Folding of an Elementary Protein Structural Motif

The journal of physical chemistry. B, 2018-12, Vol.122 (49), p.11083-11094

2018

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Sequence, structure, and cooperativity in folding of elementary protein structural motifs

Proceedings of the National Academy of Sciences - PNAS, 2015-08, Vol.112 (32), p.9890-9895

2015

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Chirality Inversion of CdSe and CdS Quantum Dots without Changing the Stereochemistry of the Capping Ligand

ACS nano, 2016-03, Vol.10 (3), p.3809-3815

2016

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Site-Specific Thermodynamic Stability and Unfolding of a de Novo Designed Protein Structural Motif Mapped by 13C Isotopically Edited IR Spectroscopy

Journal of the American Chemical Society, 2014-04, Vol.136 (16), p.6037-6048

2014

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Single-molecule spectroscopy of the temperature-induced collapse of unfolded proteins

Proceedings of the National Academy of Sciences - PNAS, 2009-12, Vol.106 (49), p.20740-20745

2009

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Chemical, physical, and theoretical kinetics of an ultrafast folding protein

Proceedings of the National Academy of Sciences - PNAS, 2008-12, Vol.105 (48), p.18655-18662

2008

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Experimental Tests of Villin Subdomain Folding Simulations

Journal of molecular biology, 2003-06, Vol.329 (4), p.625-630

2003

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Formation and helicity control of ssDNA templated porphyrin nanoassemblies

Chemical communications (Cambridge, England), 2013-01, Vol.49 (10), p.1020-1022

2013

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High-Resolution X-Ray Crystal Structures of the Villin Headpiece Subdomain, an Ultrafast Folding Protein

Proceedings of the National Academy of Sciences - PNAS, 2005-05, Vol.102 (21), p.7517-7522

2005

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A positively charged calcite surface model for molecular dynamics studies of wettability alteration

Journal of colloid and interface science, 2020-06, Vol.569, p.128-139

2020

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Biophysical and structural considerations for protein sequence evolution

BMC evolutionary biology, 2011-12, Vol.11 (1), p.361, Article 361

2011

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Wettability Reversal on Dolomite Surfaces by Divalent Ions and Surfactants: An Experimental and Molecular Dynamics Simulation Study

Langmuir, 2021-06, Vol.37 (22), p.6641-6649

2021

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Effects of Surfactant Charge and Molecular Structure on Wettability Alteration of Calcite: Insights from Molecular Dynamics Simulations

The journal of physical chemistry. B, 2021-02, Vol.125 (4), p.1293-1305

2021

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Double Hydrogen Bonding between Side Chain Carboxyl Groups in Aqueous Solutions of Poly (β-L-Malic Acid): Implication for the Evolutionary Origin of Nucleic Acids

Life (Basel, Switzerland), 2017-08, Vol.7 (3), p.35

2017

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Effect of Asphaltene Structure on Association and Aggregation Using Molecular Dynamics

The journal of physical chemistry. B, 2013-05, Vol.117 (18), p.5765-5776

2013

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Multivariate Analysis of Spectral Data with Frequency Shifts: Application to Temperature Dependent Infrared Spectra of Peptides and Proteins

Analytical chemistry (Washington), 2013-10, Vol.85 (20), p.9588-9595

Kubelka, Jan

2013

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Estimating Free-Energy Barrier Heights for an Ultrafast Folding Protein from Calorimetric and Kinetic Data

The journal of physical chemistry. B, 2008-05, Vol.112 (19), p.5938-5949

2008

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Molecular Dynamics Simulations of the Vapor–Liquid Equilibria in CO2/n‑Pentane, Propane/n‑Pentane, and Propane/n‑Hexane Binary Mixtures

The journal of physical chemistry. B, 2021-06, Vol.125 (24), p.6658-6669

2021

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Nature of Vibrational Coupling in Helical Peptides: An Isotopic Labeling Study

Journal of the American Chemical Society, 2004-03, Vol.126 (8), p.2346-2354

2004

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Atomistic Molecular Dynamics Simulations of Surfactant-Induced Wettability Alteration in Crevices of Calcite Nanopores

Energy & fuels, 2020-03, Vol.34 (3), p.3135-3143

2020

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Quantitative Predictions and Experimental Validation of Liquid–Vapor Interfacial Tension in Binary and Ternary Mixtures of Alkanes Using Molecular Dynamics Simulations

The journal of physical chemistry. B, 2023-01, Vol.127 (1), p.396-406

2023

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Wettability alteration by Smart Water multi-ion exchange in carbonates: A molecular dynamics simulation study

Journal of molecular liquids, 2021-06, Vol.332, p.115830, Article 115830

2021

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Time-resolved methods in biophysics. 9. Laser temperature-jump methods for investigating biomolecular dynamics

Liquid-Vapor Interfacial Tension in Alkane Mixtures: Improving Predictive Capabilities of Molecular Dynamics Simulations

Ligand Induced Circular Dichroism and Circularly Polarized Luminescence in CdSe Quantum Dots

Effect of Mutations on the Global and Site-Specific Stability and Folding of an Elementary Protein Structural Motif

Sequence, structure, and cooperativity in folding of elementary protein structural motifs

Chirality Inversion of CdSe and CdS Quantum Dots without Changing the Stereochemistry of the Capping Ligand

Site-Specific Thermodynamic Stability and Unfolding of a de Novo Designed Protein Structural Motif Mapped by 13C Isotopically Edited IR Spectroscopy

Single-molecule spectroscopy of the temperature-induced collapse of unfolded proteins

Chemical, physical, and theoretical kinetics of an ultrafast folding protein

Experimental Tests of Villin Subdomain Folding Simulations

Formation and helicity control of ssDNA templated porphyrin nanoassemblies

High-Resolution X-Ray Crystal Structures of the Villin Headpiece Subdomain, an Ultrafast Folding Protein

A positively charged calcite surface model for molecular dynamics studies of wettability alteration

Biophysical and structural considerations for protein sequence evolution

Wettability Reversal on Dolomite Surfaces by Divalent Ions and Surfactants: An Experimental and Molecular Dynamics Simulation Study

Effects of Surfactant Charge and Molecular Structure on Wettability Alteration of Calcite: Insights from Molecular Dynamics Simulations

Double Hydrogen Bonding between Side Chain Carboxyl Groups in Aqueous Solutions of Poly (β-L-Malic Acid): Implication for the Evolutionary Origin of Nucleic Acids

Effect of Asphaltene Structure on Association and Aggregation Using Molecular Dynamics

Multivariate Analysis of Spectral Data with Frequency Shifts: Application to Temperature Dependent Infrared Spectra of Peptides and Proteins

Estimating Free-Energy Barrier Heights for an Ultrafast Folding Protein from Calorimetric and Kinetic Data

Molecular Dynamics Simulations of the Vapor–Liquid Equilibria in CO2/n‑Pentane, Propane/n‑Pentane, and Propane/n‑Hexane Binary Mixtures

Nature of Vibrational Coupling in Helical Peptides: An Isotopic Labeling Study

Atomistic Molecular Dynamics Simulations of Surfactant-Induced Wettability Alteration in Crevices of Calcite Nanopores

Quantitative Predictions and Experimental Validation of Liquid–Vapor Interfacial Tension in Binary and Ternary Mixtures of Alkanes Using Molecular Dynamics Simulations

Wettability alteration by Smart Water multi-ion exchange in carbonates: A molecular dynamics simulation study

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