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The PARP Side of the Nucleus: Molecular Actions, Physiological Outcomes, and Clinical Targets

Molecular cell, 2010-07, Vol.39 (1), p.8-24

2010

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PARP-1 Regulates Chromatin Structure and Transcription through a KDM5B-Dependent Pathway

Molecular cell, 2010-09, Vol.39 (5), p.736-749

2010

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Gene editing and CRISPR in the clinic: current and future perspectives

Bioscience reports, 2020-04, Vol.40 (4)

2020

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OperonSEQer: A set of machine-learning algorithms with threshold voting for detection of operon pairs using short-read RNA-sequencing data

PLoS computational biology, 2022-01, Vol.18 (1), p.e1009731-e1009731

2022

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GRHL2-Dependent Enhancer Switching Maintains a Pluripotent Stem Cell Transcriptional Subnetwork after Exit from Naive Pluripotency

Cell stem cell, 2018-08, Vol.23 (2), p.226-238.e4

2018

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Extraction and biomolecular analysis of dermal interstitial fluid collected with hollow microneedles

Communications biology, 2018-10, Vol.1 (1), p.173-173, Article 173

2018

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The histone variant macroH2A1 marks repressed autosomal chromatin, but protects a subset of its target genes from silencing

Genes & development, 2010-01, Vol.24 (1), p.21-32

2010

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Reciprocal Binding of PARP-1 and Histone H1 at Promoters Specifies Transcriptional Outcomes

Science (American Association for the Advancement of Science), 2008-02, Vol.319 (5864), p.819-821

2008

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Two miRNA Clusters Reveal Alternative Paths in Late-Stage Reprogramming

Cell stem cell, 2014-05, Vol.14 (5), p.617-631

2014

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Enzymes in the NAD+ Salvage Pathway Regulate SIRT1 Activity at Target Gene Promoters

The Journal of biological chemistry, 2009-07, Vol.284 (30), p.20408-20417

2009

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Regulation of Poly(ADP-ribose) Polymerase-1-dependent Gene Expression through Promoter-directed Recruitment of a Nuclear NAD+ Synthase

The Journal of biological chemistry, 2012-04, Vol.287 (15), p.12405-12416

2012

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Global Analysis of Transcriptional Regulation by Poly(ADP-ribose) Polymerase-1 and Poly(ADP-ribose) Glycohydrolase in MCF-7 Human Breast Cancer Cells

The Journal of biological chemistry, 2009-12, Vol.284 (49), p.33926-33938

2009

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Upregulation of CD14 in mesenchymal stromal cells accelerates lipopolysaccharide-induced response and enhances antibacterial properties

iScience, 2022-02, Vol.25 (2), p.103759-103759, Article 103759

2022

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OperonSEQer: A set of machine-learning algorithms with threshold voting for detection of operon pairs using short-read RNA-sequencing data

PLoS computational biology, 2022-01, Vol.18 (1)

2022

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Epigenetics of cellular reprogramming

Current opinion in genetics & development, 2013-10, Vol.23 (5), p.548-555

2013

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Real-Time Selective Sequencing with RUBRIC: Read Until with Basecall and Reference-Informed Criteria

Scientific reports, 2019-08, Vol.9 (1), p.11475-11, Article 11475

2019

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Expression of Alternative Ago2 Isoform Associated with Loss of microRNA-Driven Translational Repression in Mouse Oocytes

Current biology, 2018-01, Vol.28 (2), p.296-302.e3

2018

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High-Density Guide RNA Tiling and Machine Learning for Designing CRISPR Interference in Synechococcus sp. PCC 7002

ACS synthetic biology, 2023-04, Vol.12 (4), p.1175-1186

2023

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Real-Time Selective Sequencing with RUBRIC: Read Until with Basecall and Reference-Informed Criteria

Scientific reports, 2019-08, Vol.9 (1)

2019

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Real-Time Selective Sequencing with RUBRIC: Read Until with Basecall and Reference-Informed Criteria

Scientific reports, 2019-08, Vol.9 (1)

2019

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FOXD3 Regulates Pluripotent Stem Cell Potential by Simultaneously Initiating and Repressing Enhancer Activity

Cell stem cell, 2016-01, Vol.18 (1), p.104-117

2016

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Tunable Intervalence Charge Transfer in Ruthenium Prussian Blue Analog Enables Stable and Efficient Biocompatible Artificial Synapses

Advanced materials (Weinheim), 2023-09, Vol.35 (37), p.e2207595-e2207595

2023

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Systematic and stochastic influences on the performance of the MinION nanopore sequencer across a range of nucleotide bias

Scientific reports, 2018-02, Vol.8 (1), p.3159-13, Article 3159

2018

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Publisher Correction: Real-Time Selective Sequencing with RUBRIC: Read Until with Basecall and Reference-Informed Criteria

Scientific reports, 2019-11, Vol.9 (1), p.17504-1, Article 17504

2019

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Dynamic reorganization of the AC16 cardiomyocyte transcriptome in response to TNFα signaling revealed by integrated genomic analyses

BMC genomics, 2014-02, Vol.15 (1), p.155-155, Article 155

2014

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The PARP Side of the Nucleus: Molecular Actions, Physiological Outcomes, and Clinical Targets

PARP-1 Regulates Chromatin Structure and Transcription through a KDM5B-Dependent Pathway

Gene editing and CRISPR in the clinic: current and future perspectives

OperonSEQer: A set of machine-learning algorithms with threshold voting for detection of operon pairs using short-read RNA-sequencing data

GRHL2-Dependent Enhancer Switching Maintains a Pluripotent Stem Cell Transcriptional Subnetwork after Exit from Naive Pluripotency

Extraction and biomolecular analysis of dermal interstitial fluid collected with hollow microneedles

The histone variant macroH2A1 marks repressed autosomal chromatin, but protects a subset of its target genes from silencing

Reciprocal Binding of PARP-1 and Histone H1 at Promoters Specifies Transcriptional Outcomes

Two miRNA Clusters Reveal Alternative Paths in Late-Stage Reprogramming

Enzymes in the NAD+ Salvage Pathway Regulate SIRT1 Activity at Target Gene Promoters

Regulation of Poly(ADP-ribose) Polymerase-1-dependent Gene Expression through Promoter-directed Recruitment of a Nuclear NAD+ Synthase

Global Analysis of Transcriptional Regulation by Poly(ADP-ribose) Polymerase-1 and Poly(ADP-ribose) Glycohydrolase in MCF-7 Human Breast Cancer Cells

Upregulation of CD14 in mesenchymal stromal cells accelerates lipopolysaccharide-induced response and enhances antibacterial properties

OperonSEQer: A set of machine-learning algorithms with threshold voting for detection of operon pairs using short-read RNA-sequencing data

Epigenetics of cellular reprogramming

Real-Time Selective Sequencing with RUBRIC: Read Until with Basecall and Reference-Informed Criteria

Expression of Alternative Ago2 Isoform Associated with Loss of microRNA-Driven Translational Repression in Mouse Oocytes

High-Density Guide RNA Tiling and Machine Learning for Designing CRISPR Interference in Synechococcus sp. PCC 7002

Real-Time Selective Sequencing with RUBRIC: Read Until with Basecall and Reference-Informed Criteria

Real-Time Selective Sequencing with RUBRIC: Read Until with Basecall and Reference-Informed Criteria

FOXD3 Regulates Pluripotent Stem Cell Potential by Simultaneously Initiating and Repressing Enhancer Activity

Tunable Intervalence Charge Transfer in Ruthenium Prussian Blue Analog Enables Stable and Efficient Biocompatible Artificial Synapses

Systematic and stochastic influences on the performance of the MinION nanopore sequencer across a range of nucleotide bias

Publisher Correction: Real-Time Selective Sequencing with RUBRIC: Read Until with Basecall and Reference-Informed Criteria

Dynamic reorganization of the AC16 cardiomyocyte transcriptome in response to TNFα signaling revealed by integrated genomic analyses

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