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Production of itaconic acid from alkali pretreated lignin by dynamic two stage bioconversion

Nature communications, 2021-04, Vol.12 (1), p.2261-12, Article 2261

2021

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Small and mighty: adaptation of superphylum Patescibacteria to groundwater environment drives their genome simplicity

Microbiome, 2020-04, Vol.8 (1), p.51-15, Article 51

2020

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Mutant alcohol dehydrogenase leads to improved ethanol tolerance in Clostridium thermocellum

Proceedings of the National Academy of Sciences - PNAS, 2011-08, Vol.108 (33), p.13752-13757

2011

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Twenty-One Genome Sequences from Pseudomonas Species and 19 Genome Sequences from Diverse Bacteria Isolated from the Rhizosphere and Endosphere of Populus deltoides

Journal of Bacteriology, 2012-11, Vol.194 (21), p.5991-5993

2012

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Nitrogen addition alters soil fungal communities, but root fungal communities are resistant to change

Frontiers in microbiology, 2023-01, Vol.13 (1), p.1033631-1033631

2023

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Enrichment of Root Endophytic Bacteria from Populus deltoides and Single-Cell-Genomics Analysis

Applied and environmental microbiology, 2016-09, Vol.82 (18), p.5698-5708

2016

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Protoplast fusion in Bacillus species produces frequent, unbiased, genome-wide homologous recombination

Nucleic acids research, 2022-06, Vol.50 (11), p.6211

2022

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From wolves to humans: oral microbiome resistance to transfer across mammalian hosts

mBio, 2024-03, Vol.15 (3), p.e0334223-e0334223

2024

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One-time nitrogen fertilization shifts switchgrass soil microbiomes within a context of larger spatial and temporal variation

PloS one, 2019-06, Vol.14 (6), p.e0211310-e0211310

2019

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Nutrient Exposure Alters Microbial Composition, Structure, and Mercury Methylating Activity in Periphyton in a Contaminated Watershed

Frontiers in microbiology, 2021-03, Vol.12 (12), p.647861-647861

2021

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Paradigm for industrial strain improvement identifies sodium acetate tolerance loci in Zymomonas mobilis and Saccharomyces cerevisiae

Proceedings of the National Academy of Sciences - PNAS, 2010-06, Vol.107 (23), p.10395-10400

2010

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Specialized activities and expression differences for Clostridium thermocellum biofilm and planktonic cells

Scientific reports, 2017-02, Vol.7 (1), p.43583-43583, Article 43583

2017

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A Case Study into Microbial Genome Assembly Gap Sequences and Finishing Strategies

Frontiers in microbiology, 2017-07, Vol.8, p.1272-1272

2017

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Pentose sugars inhibit metabolism and increase expression of an AgrD-type cyclic pentapeptide in Clostridium thermocellum

Scientific reports, 2017-02, Vol.7 (1), p.43355-43355, Article 43355

2017

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Generation and Characterization of Acid Tolerant Fibrobacter succinogenes S85

Scientific reports, 2017-05, Vol.7 (1), p.2277-15, Article 2277

2017

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Phylogenomics and genetic analysis of solvent-producing Clostridium species

Scientific data, 2024-05, Vol.11 (1), p.432-432, Article 432

2024

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Draft Genome Sequences for Clostridium thermocellum Wild-Type Strain YS and Derived Cellulose Adhesion-Defective Mutant Strain AD2

Journal of Bacteriology, 2012-06, Vol.194 (12), p.3290-3291

2012

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Seasonality and longer-term development generate temporal dynamics in the Populus microbiome

mSystems, 2024-03, Vol.9 (3), p.e0088623-e0088623

2024

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Cultivating the Bacterial Microbiota of Populus Roots

mSystems, 2021-06, Vol.6 (3)

2021

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Elevated temperature alters microbial communities, but not decomposition rates, during 3 years of in situ peat decomposition

mSystems, 2023-10, Vol.8 (5), p.e0033723-e0033723

2023

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Relationships between Sphaerulina musiva Infection and the Populus Microbiome and Metabolome

mSystems, 2022-08, Vol.7 (4), p.e0012022-e0012022

2022

Volltextzugriff (PDF)

Draft Genome Sequence for Microbacterium laevaniformans Strain OR221, a Bacterium Tolerant to Metals, Nitrate, and Low pH

Journal of Bacteriology, 2012-06, Vol.194 (12), p.3279-3280

2012

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Replicates, Read Numbers, and Other Important Experimental Design Considerations for Microbial RNA-seq Identified Using Bacillus thuringiensis Datasets

Frontiers in microbiology, 2016-05, Vol.7, p.794-794

2016

Volltextzugriff (PDF)

Fire alters plant microbiome assembly patterns: integrating the plant and soil microbial response to disturbance

The New phytologist, 2021-06, Vol.230 (6), p.2433-2446

2021

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Ant handling changes myrmecochore seed coat microbiomes and alters diversity of seed‐borne plant pathogenic fungi

Functional ecology, 2024-04, Vol.38 (4), p.861-874

2024

Volltextzugriff (PDF)

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Production of itaconic acid from alkali pretreated lignin by dynamic two stage bioconversion

Small and mighty: adaptation of superphylum Patescibacteria to groundwater environment drives their genome simplicity

Mutant alcohol dehydrogenase leads to improved ethanol tolerance in Clostridium thermocellum

Twenty-One Genome Sequences from Pseudomonas Species and 19 Genome Sequences from Diverse Bacteria Isolated from the Rhizosphere and Endosphere of Populus deltoides

Nitrogen addition alters soil fungal communities, but root fungal communities are resistant to change

Enrichment of Root Endophytic Bacteria from Populus deltoides and Single-Cell-Genomics Analysis

Protoplast fusion in Bacillus species produces frequent, unbiased, genome-wide homologous recombination

From wolves to humans: oral microbiome resistance to transfer across mammalian hosts

One-time nitrogen fertilization shifts switchgrass soil microbiomes within a context of larger spatial and temporal variation

Nutrient Exposure Alters Microbial Composition, Structure, and Mercury Methylating Activity in Periphyton in a Contaminated Watershed

Paradigm for industrial strain improvement identifies sodium acetate tolerance loci in Zymomonas mobilis and Saccharomyces cerevisiae

Specialized activities and expression differences for Clostridium thermocellum biofilm and planktonic cells

A Case Study into Microbial Genome Assembly Gap Sequences and Finishing Strategies

Pentose sugars inhibit metabolism and increase expression of an AgrD-type cyclic pentapeptide in Clostridium thermocellum

Generation and Characterization of Acid Tolerant Fibrobacter succinogenes S85

Phylogenomics and genetic analysis of solvent-producing Clostridium species

Draft Genome Sequences for Clostridium thermocellum Wild-Type Strain YS and Derived Cellulose Adhesion-Defective Mutant Strain AD2

Seasonality and longer-term development generate temporal dynamics in the Populus microbiome

Cultivating the Bacterial Microbiota of Populus Roots

Elevated temperature alters microbial communities, but not decomposition rates, during 3 years of in situ peat decomposition

Relationships between Sphaerulina musiva Infection and the Populus Microbiome and Metabolome

Draft Genome Sequence for Microbacterium laevaniformans Strain OR221, a Bacterium Tolerant to Metals, Nitrate, and Low pH

Replicates, Read Numbers, and Other Important Experimental Design Considerations for Microbial RNA-seq Identified Using Bacillus thuringiensis Datasets

Fire alters plant microbiome assembly patterns: integrating the plant and soil microbial response to disturbance

Ant handling changes myrmecochore seed coat microbiomes and alters diversity of seed‐borne plant pathogenic fungi

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