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Dynamic transcriptional response of Saccharomyces cerevisiae cells to copper

Scientific reports, 2020-10, Vol.10 (1), p.18487, Article 18487

2020

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A novel strategy for selection and validation of reference genes in dynamic multidimensional experimental design in yeast

PloS one, 2012-06, Vol.7 (6), p.e38351-e38351

2012

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Complex disease interventions from a network model for type 2 diabetes

PloS one, 2013-06, Vol.8 (6), p.e65854-e65854

2013

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Saccharomyces cerevisiae adapted to grow in the presence of low-dose rapamycin exhibit altered amino acid metabolism

Cell communication and signaling, 2018-11, Vol.16 (1), p.85-85, Article 85

2018

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Integration of metabolome data with metabolic networks reveals reporter reactions

Molecular systems biology, 2006, Vol.2 (1), p.50-n/a

2006

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Integration of Metabolic Modeling and Phenotypic Data in Evaluation and Improvement of Ethanol Production Using Respiration-Deficient Mutants of Saccharomyces cerevisiae

Applied and Environmental Microbiology, 2008-09, Vol.74 (18), p.5809-5816

2008

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Effect of wastewater composition on archaeal population diversity

Water research (Oxford), 2005-04, Vol.39 (8), p.1576-1584

2005

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Transcriptomic response of yeast cells to ATX1 deletion under different copper levels

BMC genomics, 2016-07, Vol.17 (1), p.489-489, Article 489

2016

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A novel topological centrality measure capturing biologically important proteins

Molecular bioSystems, 2016-01, Vol.12 (2), p.666-673

2016

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Doxorubicin induces an extensive transcriptional and metabolic rewiring in yeast cells

Scientific reports, 2018-09, Vol.8 (1), p.13672-14, Article 13672

2018

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A novel topological centrality measure capturing biologically important proteinsElectronic supplementary information (ESI) available. See DOI: 10.1039/c5mb00732a

2016-01

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Transcriptional remodelling in response to changing copper levels in the Wilson and Menkes disease model of Saccharomyces cerevisiae

Molecular bioSystems, 2013-11, Vol.9 (11), p.2889-2908

2013

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An integrative analysis of transcriptomic response of ethanol tolerant strains to ethanol in Saccharomyces cerevisiae

Molecular bioSystems, 2016-01, Vol.12 (2), p.464-476

2016

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Time-dependent re-organization of biological processes by the analysis of the dynamic transcriptional response of yeast cells to doxorubicin

Molecular omics, 2021-08, Vol.17 (4), p.572-582

2021

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Genome-Wide Transcriptional Response of Saccharomyces cerevisiae to Stress-Induced Perturbations

Frontiers in bioengineering and biotechnology, 2016-02, Vol.4, p.17-17

2016

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Evaluation of industrial Saccharomyces cerevisiae strains for ethanol production from biomass

Biomass & bioenergy, 2012-10, Vol.45, p.230-238

2012

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An integrative analysis of transcriptomic response of ethanol tolerant strains to ethanol in Saccharomyces cerevisiaeElectronic supplementary information (ESI) available: S1-S13. See DOI: 10.1039/c5mb00622h

2016-01

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A novel integrative network approach to understand the interplay between cardiovascular disease and other complex disorders

Molecular bioSystems, 2011-07, Vol.7 (7), p.2205-2219

2011

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CLUSTERnGO: a user-defined modelling platform for two-stage clustering of time-series data

Bioinformatics, 2016-02, Vol.32 (3), p.388-397

2016

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Insights Into the Mechanism of Anticancer Drug Imatinib Revealed Through Multi-Omic Analyses in Yeast

Omics (Larchmont, N.Y.), 2020-11, Vol.24 (11), p.667-678

2020

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Identification of Novel Components of Target-of-Rapamycin Signaling Pathway by Network-Based Multi-Omics Integrative Analysis

Omics (Larchmont, N.Y.), 2019-05, Vol.23 (5), p.274-284

2019

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Analysis of copper homeostasis in yeast

New biotechnology, 2012-09, Vol.29, p.S143-S144

2012

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A system based network approach to ethanol tolerance in Saccharomyces cerevisiae

BMC systems biology, 2014-08, Vol.8 (1), p.90-90, Article 90

2014

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The global transcriptional response of a raw starch-degrading amylolyticSaccharomyces cerevisiae strain to oxygen limitation and genetic modification

Turkish journal of biology, 2016, Vol.40, p.684-693

2016

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Dynamic transcriptional response of Saccharomyces cerevisiae cells to copper

A novel strategy for selection and validation of reference genes in dynamic multidimensional experimental design in yeast

Complex disease interventions from a network model for type 2 diabetes

Saccharomyces cerevisiae adapted to grow in the presence of low-dose rapamycin exhibit altered amino acid metabolism

Integration of metabolome data with metabolic networks reveals reporter reactions

Integration of Metabolic Modeling and Phenotypic Data in Evaluation and Improvement of Ethanol Production Using Respiration-Deficient Mutants of Saccharomyces cerevisiae

Effect of wastewater composition on archaeal population diversity

Transcriptomic response of yeast cells to ATX1 deletion under different copper levels

A novel topological centrality measure capturing biologically important proteins

Doxorubicin induces an extensive transcriptional and metabolic rewiring in yeast cells

A novel topological centrality measure capturing biologically important proteinsElectronic supplementary information (ESI) available. See DOI: 10.1039/c5mb00732a

Transcriptional remodelling in response to changing copper levels in the Wilson and Menkes disease model of Saccharomyces cerevisiae

An integrative analysis of transcriptomic response of ethanol tolerant strains to ethanol in Saccharomyces cerevisiae

Time-dependent re-organization of biological processes by the analysis of the dynamic transcriptional response of yeast cells to doxorubicin

Genome-Wide Transcriptional Response of Saccharomyces cerevisiae to Stress-Induced Perturbations

Evaluation of industrial Saccharomyces cerevisiae strains for ethanol production from biomass

An integrative analysis of transcriptomic response of ethanol tolerant strains to ethanol in Saccharomyces cerevisiaeElectronic supplementary information (ESI) available: S1-S13. See DOI: 10.1039/c5mb00622h

A novel integrative network approach to understand the interplay between cardiovascular disease and other complex disorders

CLUSTERnGO: a user-defined modelling platform for two-stage clustering of time-series data

Integrated multilaboratory systems biology reveals differences in protein metabolism between two reference yeast strains

Insights Into the Mechanism of Anticancer Drug Imatinib Revealed Through Multi-Omic Analyses in Yeast

Identification of Novel Components of Target-of-Rapamycin Signaling Pathway by Network-Based Multi-Omics Integrative Analysis

Analysis of copper homeostasis in yeast

A system based network approach to ethanol tolerance in Saccharomyces cerevisiae

The global transcriptional response of a raw starch-degrading amylolyticSaccharomyces cerevisiae strain to oxygen limitation and genetic modification

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